{ "study_id": "STUDY-COLEOPTERA-PCWDE-2026", "preprint_id": "PREPRINT-13", "version": "2.0.0", "title": "Permian–Cenozoic Coleoptera Phylogenomics (308.0 to 0.0 Ma): Resolving Archostemata–Myxophaga–Adephaga–Polyphaga Divergence, Strepsiptera Compositional Long-Branch Attraction, and Horizontal Gene Transfer of Microbial Plant Cell-Wall Degrading Enzymes (GH5, GH28, GH45) via RuNIE", "tier": 3, "tier_label": "Tier 3: Scientific", "beaker_prior": 5, "beaker_posterior": 5, "runie_replicates": 1000, "total_records": 101, "total_taxa": 83, "total_raw_bp": 1378439, "empirical_mitogenome_records": 83, "empirical_mitogenome_bp": 1354809, "nuclear_pcwde_records": 18, "nuclear_pcwde_bp": 23630, "full_length_alignments": { "mafft_v7526_mito_cols": 35624, "mafft_v7526_mito_cpu_sec": 896.99, "mafft_v7526_nuc_cols": 3321, "mafft_v7526_nuc_cpu_sec": 2.08, "mafft_v7526_total_evidence_cols": 38945, "mafft_v7526_total_evidence_cpu_sec": 899.07, "native_gotoh_msa_ry3_cpu_sec": null, 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