{
  "abba_baba_tests": [
    {
      "abba_shared_p2_p3_sites": 236,
      "baba_shared_p1_p3_sites": 184,
      "bbaa_concordant_sites": 807,
      "biological_interpretation": "Incomplete lineage sorting and secondary contact hybridization between sympatric invasive Coptotermes formosanus and C. gestroi",
      "outgroup_taxon": "A:T001 (Periplaneta americana Outgroup)",
      "p1_taxon": "D:T021 (Coptotermes formosanus Formosan Invasive)",
      "p2_taxon": "D:T022 (Coptotermes gestroi Asian Invasive)",
      "p3_donor_taxon": "D:T023 (Coptotermes lacteus Australian Mound)",
      "patterson_d_stat": 0.1238,
      "quartet_id": "ABBA-01-COPTOTERMES-FORMOSANUS-GESTROI-INTROGRESSION",
      "z_score": 2.5373
    },
    {
      "abba_shared_p2_p3_sites": 170,
      "baba_shared_p1_p3_sites": 157,
      "bbaa_concordant_sites": 389,
      "biological_interpretation": "Holarctic Reticulitermes refugial divergence and interspecific allele sharing across temperate forest corridors",
      "outgroup_taxon": "A:T001 (Periplaneta americana Outgroup)",
      "p1_taxon": "D:T026 (Reticulitermes flavipes Nearctic/Invasive)",
      "p2_taxon": "D:T027 (Reticulitermes virginicus Southern Nearctic)",
      "p3_donor_taxon": "D:T028 (Reticulitermes lucifugus Mediterranean)",
      "patterson_d_stat": 0.0398,
      "quartet_id": "ABBA-02-RETICULITERMES-FLAVIPES-VIRGINICUS-LUCIFUGUS",
      "z_score": 0.7189
    },
    {
      "abba_shared_p2_p3_sites": 139,
      "baba_shared_p1_p3_sites": 236,
      "bbaa_concordant_sites": 938,
      "biological_interpretation": "Ancestral polymorphism and Termitomyces fungus-comb co-diversification across Paleotropical Macrotermitinae",
      "outgroup_taxon": "A:T001 (Periplaneta americana Outgroup)",
      "p1_taxon": "E:T033 (Macrotermes natalensis African Savanna)",
      "p2_taxon": "E:T035 (Macrotermes barneyi Indo-Malayan)",
      "p3_donor_taxon": "E:T039 (Odontotermes obesus Fungus Gardener)",
      "patterson_d_stat": -0.2587,
      "quartet_id": "ABBA-03-MACROTERMES-ODONTOTERMES-FUNGUS-COMB",
      "z_score": 5.0091
    },
    {
      "abba_shared_p2_p3_sites": 279,
      "baba_shared_p1_p3_sites": 395,
      "bbaa_concordant_sites": 606,
      "biological_interpretation": "Rapid pantropical canopy radiation and incomplete lineage sorting across diterpene-spraying Nasutitermitinae",
      "outgroup_taxon": "A:T001 (Periplaneta americana Outgroup)",
      "p1_taxon": "G:T054 (Nasutitermes corniger Neotropical)",
      "p2_taxon": "G:T059 (Nasutitermes matangensis Sundaland)",
      "p3_donor_taxon": "G:T060 (Hospitalitermes medioflavus Processional)",
      "patterson_d_stat": -0.1721,
      "quartet_id": "ABBA-04-NASUTITERMES-HOSPITALITERMES-SYNTERMITINAE",
      "z_score": 4.4682
    }
  ],
  "bootstrap_replicates": 1000,
  "calibrated_nodes": [
    {
      "age_ma": 238.4,
      "ci_max_ma": 254.6,
      "ci_min_ma": 221.2,
      "clade_name": "Root Dictyoptera / Blattodea Outgroups & Sister Wood-Roach Cryptocercus [A] vs. Crown Isoptera [B-G]",
      "coalescent_units_cu": 4.24,
      "ecosystem_role": "Xylophagous subsocial wood-roach sister lineage anchoring the origin of termite eusociality",
      "fossil_or_biogeo_anchor": "Triassic-Jurassic Blattodea / Xylophagodea divergence & Baissatermes crown anchor (~218-256 Ma)",
      "key_enzymes_or_loci": "Blattabacterium Nitrogen Recycling, Endogenous GH9 Cellulase & Parabasalid Hindgut Symbiosis",
      "node_id": "Node I",
      "quartet_lpp": 1.0,
      "quartet_q1": 0.992,
      "quartet_q2": 0.004,
      "quartet_q3": 0.004,
      "sector_code": "[A]",
      "trophic_guild": "Omnivorous Cockroach Outgroups & Subsocial Biparental Wood-Roaches (Periplaneta, Blattella, Cryptocercus)",
      "ufboot_pct": 100.0
    },
    {
      "age_ma": 148.8,
      "ci_max_ma": 160.4,
      "ci_min_ma": 137.4,
      "clade_name": "Crown Isoptera Split (Basal Relictual Families Mastotermitidae/Archotermopsidae/Hodotermitidae [B] vs. Euisoptera [C-G])",
      "coalescent_units_cu": 3.22,
      "ecosystem_role": "Origin of obligate eusociality, soldier caste differentiation, and anal proctodeal trophallaxis",
      "fossil_or_biogeo_anchor": "Late Jurassic-Berriasian Early Cretaceous Baissatermes & Valditermes fossil horizon (~136-162 Ma)",
      "key_enzymes_or_loci": "Mixotricha/Trichonympha Protist Symbiosis, Juvenile Hormone Esterase & Vitellogenin Caste Network",
      "node_id": "Node II",
      "quartet_lpp": 1.0,
      "quartet_q1": 0.976,
      "quartet_q2": 0.013,
      "quartet_q3": 0.011,
      "sector_code": "[B]",
      "trophic_guild": "Relictual Dampwood & Harvester Termites (Mastotermes, Zootermopsis, Porotermes, Hodotermes)",
      "ufboot_pct": 100.0
    },
    {
      "age_ma": 126.4,
      "ci_max_ma": 136.8,
      "ci_min_ma": 116.2,
      "clade_name": "Crown Euisoptera Divergence (Single-Piece Drywood Kalotermitidae [C] vs. Clade Neoisoptera [D, E, F, G])",
      "coalescent_units_cu": 2.61,
      "ecosystem_role": "Loss of intracellular Blattabacterium in Neoisoptera vs. drywood water-conserving nidification",
      "fossil_or_biogeo_anchor": "Early Cretaceous Barremian-Aptian Burmese/Lebanese amber Kalotermitidae horizon (~115-138 Ma)",
      "key_enzymes_or_loci": "Rectal-Pad Desiccation Transporters, Endogenous GH9 Endoglucanase A & Phragmotic Soldier Mandibles",
      "node_id": "Node III",
      "quartet_lpp": 1.0,
      "quartet_q1": 0.952,
      "quartet_q2": 0.026,
      "quartet_q3": 0.022,
      "sector_code": "[C]",
      "trophic_guild": "Single-Piece Drywood & Canopy-Branch Termites (Cryptotermes, Incisitermes, Neotermes, Glyptotermes)",
      "ufboot_pct": 99.9
    },
    {
      "age_ma": 98.6,
      "ci_max_ma": 108.4,
      "ci_min_ma": 89.2,
      "clade_name": "Crown Neoisoptera Divergence (Subterranean Rhinotermitidae [D] vs. Higher Termites Termitidae [E, F, G])",
      "coalescent_units_cu": 2.31,
      "ecosystem_role": "Evolution of the cephalic frontal gland (fontanelle) and central-place subterranean foraging networks",
      "fossil_or_biogeo_anchor": "Mid-Cretaceous Cenomanian Burmese/Charentese amber Archeorhinotermes & Frontal-Gland Origin (~88-109 Ma)",
      "key_enzymes_or_loci": "Frontal-Gland Secretion Biosynthesis, CYP4G15 Cuticular Hydrocarbon Synthase & GH9 Cellulases",
      "node_id": "Node IV",
      "quartet_lpp": 1.0,
      "quartet_q1": 0.934,
      "quartet_q2": 0.035,
      "quartet_q3": 0.031,
      "sector_code": "[D]",
      "trophic_guild": "Foraging Subterranean Termites with Soldier Fontanelle Defense (Coptotermes, Reticulitermes, Heterotermes)",
      "ufboot_pct": 99.9
    },
    {
      "age_ma": 72.4,
      "ci_max_ma": 81.2,
      "ci_min_ma": 63.8,
      "clade_name": "Crown Rhinotermitidae Radiation (Coptotermes/Heterotermes vs. Reticulitermes/Schedorhinotermes [D])",
      "coalescent_units_cu": 2.06,
      "ecosystem_role": "Global temperate and tropical subterranean wood decomposition and anthropogenic urban invasions",
      "fossil_or_biogeo_anchor": "Late Cretaceous Campanian-Maastrichtian Boreotropical subterranean radiation (~63-82 Ma)",
      "key_enzymes_or_loci": "Hexamerin Caste-Suppression Storage Proteins, CYP6K1 Xenobiotic P450s & Queen Parthenogenesis Loci",
      "node_id": "Node V",
      "quartet_lpp": 1.0,
      "quartet_q1": 0.916,
      "quartet_q2": 0.044,
      "quartet_q3": 0.04,
      "sector_code": "[D]",
      "trophic_guild": "Cosmopolitan Subterranean Wood-Feeding & Structural Pest Lineages (Coptotermes, Reticulitermes)",
      "ufboot_pct": 99.8
    },
    {
      "age_ma": 54.2,
      "ci_max_ma": 61.0,
      "ci_min_ma": 47.6,
      "clade_name": "Crown Termitidae [Higher Termites] Divergence (Fungus-Growing Macrotermitinae [E] vs. Non-Macrotermitinae [F, G])",
      "coalescent_units_cu": 2.44,
      "ecosystem_role": "Complete loss of cellulolytic gut protists replaced by basidiomycete fungus-comb agriculture",
      "fossil_or_biogeo_anchor": "Early Eocene Climatic Optimum (~47-62 Ma) loss of hindgut flagellates & Termitidae radiation",
      "key_enzymes_or_loci": "Termitomyces Lignin-Peroxidase Exosymbiosis, Endogenous Laccase & Mound Hypoxia Hsc70-3/Hsp60A",
      "node_id": "Node VI",
      "quartet_lpp": 1.0,
      "quartet_q1": 0.942,
      "quartet_q2": 0.031,
      "quartet_q3": 0.027,
      "sector_code": "[E]",
      "trophic_guild": "Obligate Fungus-Gardening Cathedral-Mound Termites (Macrotermes, Odontotermes, Microtermes)",
      "ufboot_pct": 100.0
    },
    {
      "age_ma": 44.8,
      "ci_max_ma": 50.6,
      "ci_min_ma": 39.2,
      "clade_name": "Soil- & Wood-Feeding Apicotermitinae/Termitinae/Cubitermitinae [F] vs. Nasutitermitinae/Syntermitinae [G]",
      "coalescent_units_cu": 1.81,
      "ecosystem_role": "Evolution of extreme gut alkalinity (pH > 11) unlocking humic soil organic matter mineralization",
      "fossil_or_biogeo_anchor": "Middle Eocene Afrotropical-Neotropical trans-oceanic dispersal & soil-feeding radiation (~38-51 Ma)",
      "key_enzymes_or_loci": "Compartmentalized Alkaline P3 Hindgut Peptidases, Fibrobacteres/Spirochaetes Microbiome & Blue Copper Luciferase",
      "node_id": "Node VII",
      "quartet_lpp": 0.9999,
      "quartet_q1": 0.888,
      "quartet_q2": 0.058,
      "quartet_q3": 0.054,
      "sector_code": "[F]",
      "trophic_guild": "Humivorous Alkaline-Gut Soil Feeders & Asymmetric Snapping-Mandible Soldiers (Pericapritermes, Termes, Anoplotermes)",
      "ufboot_pct": 99.8
    },
    {
      "age_ma": 34.6,
      "ci_max_ma": 40.2,
      "ci_min_ma": 29.4,
      "clade_name": "Crown Nasutitermitinae & Syntermitinae Split (Neotropical Syntermitinae vs. Pantropical Nasute Termites [G])",
      "coalescent_units_cu": 0.98,
      "ecosystem_role": "Replacement of biting mandibles with a chemical-warfare cephalic nozzle (nasus) enabling canopy and open-air foraging",
      "fossil_or_biogeo_anchor": "Eocene-Oligocene Transition & Early Miocene Dominican/Mexican amber Nasutitermes horizon (~28-41 Ma)",
      "key_enzymes_or_loci": "Frontal-Gland Diterpene Synthases, Terpenoid-Modifying CYP4G15/CYP4C3 & Wood-Associated Spirochaete Nitrogenase",
      "node_id": "Node VIII",
      "quartet_lpp": 0.9995,
      "quartet_q1": 0.764,
      "quartet_q2": 0.124,
      "quartet_q3": 0.112,
      "sector_code": "[G]",
      "trophic_guild": "Diterpene-Spraying Nasute Soldiers, Open-Air Lichen Grazers & Savanna Mound Builders (Nasutitermes, Hospitalitermes, Cornitermes)",
      "ufboot_pct": 99.7
    }
  ],
  "combinatorial_sweep_32_chains": [
    {
      "aic": 900682.7104,
      "bic": 901821.5783,
      "bootstrap_support_pct": 97.4,
      "chain_rank_in_regime": 1,
      "delta_ln_l_vs_best": 0.0,
      "global_rank": 1,
      "k_free_params": 131,
      "marginal_ln_l": -450210.3552,
      "model_name": "HKY+F+I+G4",
      "modeltest_time_ms": 37,
      "msa_time_ms": 1418,
      "posterior_prob": 0.96,
      "rcfv": 0.0062,
      "regime_id": "Regime 1 (1st Best — 5 Beakers): Native Bio-Suite RY3 + Super-BLAST UNVERIFIED Filter",
      "tool_chain_summary": "super-blast-adaptive -> gotoh-msa -> popgen-blind-dualpass (RY3) -> felsenstein-modeltest (HKY+F+I+G4) -> bionj-nni-ml (B=1,000) -> runie-quartet-coalescent -> TimeTreeLSD2 -> runie-mcmc-skyline (25k gen)",
      "total_cpu_time_ms": 3294,
      "tree_mcmc_time_ms": 1839
    },
    {
      "aic": 901725.3477,
      "bic": 902872.9093,
      "bootstrap_support_pct": 97.4,
      "chain_rank_in_regime": 2,
      "delta_ln_l_vs_best": -520.3187,
      "global_rank": 2,
      "k_free_params": 132,
      "marginal_ln_l": -450730.6739,
      "model_name": "TN+F+I+G4",
      "modeltest_time_ms": 37,
      "msa_time_ms": 1418,
      "posterior_prob": 0.96,
      "rcfv": 0.0062,
      "regime_id": "Regime 1 (1st Best — 5 Beakers): Native Bio-Suite RY3 + Super-BLAST UNVERIFIED Filter",
      "tool_chain_summary": "super-blast-adaptive -> gotoh-msa -> popgen-blind-dualpass (RY3) -> felsenstein-modeltest (TN+F+I+G4) -> bionj-nni-ml (B=1,000) -> runie-quartet-coalescent -> TimeTreeLSD2 -> runie-mcmc-skyline (25k gen)",
      "total_cpu_time_ms": 3294,
      "tree_mcmc_time_ms": 1839
    },
    {
      "aic": 902065.2855,
      "bic": 903230.2344,
      "bootstrap_support_pct": 97.4,
      "chain_rank_in_regime": 3,
      "delta_ln_l_vs_best": -688.2876,
      "global_rank": 3,
      "k_free_params": 134,
      "marginal_ln_l": -450898.6428,
      "model_name": "GTR+F+G4",
      "modeltest_time_ms": 44,
      "msa_time_ms": 1418,
      "posterior_prob": 0.96,
      "rcfv": 0.0062,
      "regime_id": "Regime 1 (1st Best — 5 Beakers): Native Bio-Suite RY3 + Super-BLAST UNVERIFIED Filter",
      "tool_chain_summary": "super-blast-adaptive -> gotoh-msa -> popgen-blind-dualpass (RY3) -> felsenstein-modeltest (GTR+F+G4) -> bionj-nni-ml (B=1,000) -> runie-quartet-coalescent -> TimeTreeLSD2 -> runie-mcmc-skyline (25k gen)",
      "total_cpu_time_ms": 3301,
      "tree_mcmc_time_ms": 1839
    },
    {
      "aic": 902514.2519,
      "bic": 903670.5071,
      "bootstrap_support_pct": 97.4,
      "chain_rank_in_regime": 4,
      "delta_ln_l_vs_best": -913.7708,
      "global_rank": 4,
      "k_free_params": 133,
      "marginal_ln_l": -451124.126,
      "model_name": "TIM2+F+I+G4",
      "modeltest_time_ms": 40,
      "msa_time_ms": 1418,
      "posterior_prob": 0.96,
      "rcfv": 0.0062,
      "regime_id": "Regime 1 (1st Best — 5 Beakers): Native Bio-Suite RY3 + Super-BLAST UNVERIFIED Filter",
      "tool_chain_summary": "super-blast-adaptive -> gotoh-msa -> popgen-blind-dualpass (RY3) -> felsenstein-modeltest (TIM2+F+I+G4) -> bionj-nni-ml (B=1,000) -> runie-quartet-coalescent -> TimeTreeLSD2 -> runie-mcmc-skyline (25k gen)",
      "total_cpu_time_ms": 3297,
      "tree_mcmc_time_ms": 1839
    },
    {
      "aic": 903653.4157,
      "bic": 904827.0582,
      "bootstrap_support_pct": 99.6,
      "chain_rank_in_regime": 5,
      "delta_ln_l_vs_best": -1481.3527,
      "global_rank": 5,
      "k_free_params": 135,
      "marginal_ln_l": -451691.7079,
      "model_name": "GTR+F+I+G4",
      "modeltest_time_ms": 48,
      "msa_time_ms": 1418,
      "posterior_prob": 1.0,
      "rcfv": 0.0062,
      "regime_id": "Regime 1 (1st Best — 5 Beakers): Native Bio-Suite RY3 + Super-BLAST UNVERIFIED Filter",
      "tool_chain_summary": "super-blast-adaptive -> gotoh-msa -> popgen-blind-dualpass (RY3) -> felsenstein-modeltest (GTR+F+I+G4) -> bionj-nni-ml (B=1,000) -> runie-quartet-coalescent -> TimeTreeLSD2 -> runie-mcmc-skyline (25k gen)",
      "total_cpu_time_ms": 3305,
      "tree_mcmc_time_ms": 1839
    },
    {
      "aic": 906494.1082,
      "bic": 907685.138,
      "bootstrap_support_pct": 99.6,
      "chain_rank_in_regime": 6,
      "delta_ln_l_vs_best": -2899.6989,
      "global_rank": 6,
      "k_free_params": 137,
      "marginal_ln_l": -453110.0541,
      "model_name": "GTR+F+R4",
      "modeltest_time_ms": 52,
      "msa_time_ms": 1418,
      "posterior_prob": 1.0,
      "rcfv": 0.0062,
      "regime_id": "Regime 1 (1st Best — 5 Beakers): Native Bio-Suite RY3 + Super-BLAST UNVERIFIED Filter",
      "tool_chain_summary": "super-blast-adaptive -> gotoh-msa -> popgen-blind-dualpass (RY3) -> felsenstein-modeltest (GTR+F+R4) -> bionj-nni-ml (B=1,000) -> runie-quartet-coalescent -> TimeTreeLSD2 -> runie-mcmc-skyline (25k gen)",
      "total_cpu_time_ms": 3309,
      "tree_mcmc_time_ms": 1839
    },
    {
      "aic": 945326.1597,
      "bic": 946430.253,
      "bootstrap_support_pct": 97.4,
      "chain_rank_in_regime": 7,
      "delta_ln_l_vs_best": -22325.7247,
      "global_rank": 7,
      "k_free_params": 127,
      "marginal_ln_l": -472536.0799,
      "model_name": "K80+G4",
      "modeltest_time_ms": 37,
      "msa_time_ms": 1418,
      "posterior_prob": 0.96,
      "rcfv": 0.0062,
      "regime_id": "Regime 1 (1st Best — 5 Beakers): Native Bio-Suite RY3 + Super-BLAST UNVERIFIED Filter",
      "tool_chain_summary": "super-blast-adaptive -> gotoh-msa -> popgen-blind-dualpass (RY3) -> felsenstein-modeltest (K80+G4) -> bionj-nni-ml (B=1,000) -> runie-quartet-coalescent -> TimeTreeLSD2 -> runie-mcmc-skyline (25k gen)",
      "total_cpu_time_ms": 3294,
      "tree_mcmc_time_ms": 1839
    },
    {
      "aic": 1003127.7224,
      "bic": 1004214.4284,
      "bootstrap_support_pct": 97.4,
      "chain_rank_in_regime": 8,
      "delta_ln_l_vs_best": -51228.506,
      "global_rank": 8,
      "k_free_params": 125,
      "marginal_ln_l": -501438.8612,
      "model_name": "JC",
      "modeltest_time_ms": 24,
      "msa_time_ms": 1418,
      "posterior_prob": 0.96,
      "rcfv": 0.0062,
      "regime_id": "Regime 1 (1st Best — 5 Beakers): Native Bio-Suite RY3 + Super-BLAST UNVERIFIED Filter",
      "tool_chain_summary": "super-blast-adaptive -> gotoh-msa -> popgen-blind-dualpass (RY3) -> felsenstein-modeltest (JC) -> bionj-nni-ml (B=1,000) -> runie-quartet-coalescent -> TimeTreeLSD2 -> runie-mcmc-skyline (25k gen)",
      "total_cpu_time_ms": 3281,
      "tree_mcmc_time_ms": 1839
    },
    {
      "aic": 1087334.9924,
      "bic": 1088499.9413,
      "bootstrap_support_pct": 96.7,
      "chain_rank_in_regime": 1,
      "delta_ln_l_vs_best": -93323.141,
      "global_rank": 9,
      "k_free_params": 134,
      "marginal_ln_l": -543533.4962,
      "model_name": "GTR+F+G4",
      "modeltest_time_ms": 44,
      "msa_time_ms": 1418,
      "posterior_prob": 0.9592,
      "rcfv": 0.0223,
      "regime_id": "Regime 2 (2nd Nearest — 5 Beakers): Native Bio-Suite Dayhoff-6 / Codon-12 Partitioned",
      "tool_chain_summary": "super-blast-adaptive -> gotoh-msa -> popgen-blind-dualpass (Codon-12) -> felsenstein-modeltest (GTR+F+G4) -> bionj-nni-ml (B=1,000) -> runie-quartet-coalescent -> TimeTreeLSD2 -> runie-mcmc-skyline (25k gen)",
      "total_cpu_time_ms": 3301,
      "tree_mcmc_time_ms": 1839
    },
    {
      "aic": 1088669.0456,
      "bic": 1089807.9135,
      "bootstrap_support_pct": 96.7,
      "chain_rank_in_regime": 2,
      "delta_ln_l_vs_best": -93993.1676,
      "global_rank": 10,
      "k_free_params": 131,
      "marginal_ln_l": -544203.5228,
      "model_name": "HKY+F+I+G4",
      "modeltest_time_ms": 42,
      "msa_time_ms": 1418,
      "posterior_prob": 0.9592,
      "rcfv": 0.0223,
      "regime_id": "Regime 2 (2nd Nearest — 5 Beakers): Native Bio-Suite Dayhoff-6 / Codon-12 Partitioned",
      "tool_chain_summary": "super-blast-adaptive -> gotoh-msa -> popgen-blind-dualpass (Codon-12) -> felsenstein-modeltest (HKY+F+I+G4) -> bionj-nni-ml (B=1,000) -> runie-quartet-coalescent -> TimeTreeLSD2 -> runie-mcmc-skyline (25k gen)",
      "total_cpu_time_ms": 3299,
      "tree_mcmc_time_ms": 1839
    },
    {
      "aic": 1091919.5758,
      "bic": 1093067.1374,
      "bootstrap_support_pct": 96.7,
      "chain_rank_in_regime": 3,
      "delta_ln_l_vs_best": -95617.4327,
      "global_rank": 11,
      "k_free_params": 132,
      "marginal_ln_l": -545827.7879,
      "model_name": "TN+F+I+G4",
      "modeltest_time_ms": 43,
      "msa_time_ms": 1418,
      "posterior_prob": 0.9592,
      "rcfv": 0.0223,
      "regime_id": "Regime 2 (2nd Nearest — 5 Beakers): Native Bio-Suite Dayhoff-6 / Codon-12 Partitioned",
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      "tool_chain_summary": "super-blast-adaptive -> gotoh-msa -> popgen-blind-dualpass (Unrecoded-4) -> felsenstein-modeltest (JC) -> bionj-nni-ml (B=1,000) -> runie-quartet-coalescent -> TimeTreeLSD2 -> runie-mcmc-skyline (25k gen)",
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  "core_loci_count": 18,
  "core_mitogenome_records": [
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      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Blattodea Outgroup (Blattidae)",
      "cleaned_sequence": "AATAAAGTGCCTGAATAAAGGGTTATCGTGATAGGATAAATAAAGTAATTTCTAAAATTACCTTTATTACATTTAATAGAATTAAACTATTACCTAAAATATCAAAAATTTTTGTGCACCATACACCAAAATGTATAATAAATATACATTATACTAGAAAAGTAAGCTAAATAAGCTAATGGGTTCATACCCCATTTATAGAGGAAATCCTCTCTTCTCTAATGACCAACAATTCAACAAAAATCCTCTTGTTAACAACTCTAATAAGAGGTATATTAATTTCAATTTCATCAAATTCATGATTAGGGGCATGAATAGGATTAGAAATTAATTTATTATCATTTATTCCTCTAATATCAACTAATAAGAACGTATACACAACAGAAGCCTCAATAAAATATTTTATTGTACAAGCTCTAGCATCATCAACTCTACTGTTCCTAATTATTAGAAAATCAATAATTGAAGAATTATATACATTTTCTAATAATTATTTGACATCAATAGTTATTAATACACCTTTATTATTAAAAAGTGGAGCTGCTCCACTTCACTGATGATTTCCAAGTATTATAGAAGGATTAAGATGAAACAATTGTTTCATCTTAATAACTATTCAAAAAATTGCACCACTAATATTGATTTCATATTCACTAACCATAGATACATTTATGTGAACTATTATTTTAATATCAGTTATTATTGGATCTATTGGTGGATTAAATCAAATTTCAATTCGAAAAATCCTAACATACTCTTCAATTAATCACATAGGGTGAATGTTAGTAGCTATAAATATTGGAGAAAATATATGAATTTTTTACTTCCTAATTTACTCAATTCTAACTTTAACAATCATTACAATTGTTAAATCACATCAAATTTCATTTATTAATCAAACATTTTTAACAGGAAGTGAGATATCTACAATAAAATTTTTAATATTTACCACTTTATTATCACTAGGAGGCTTACCTCCATTTTTAGGTTTTTTACCAAAATGAATTATTATTCAACACATAATTATAAACGAAATAAATTTTATTATTTCGTTTATAGTGGTTATATCACTAATAACATTGTATTATTATCTACGAGTTTGCTATGCAAGTTTTATAATTCTATATATCGAGCCAAAATGAAATGTTCAATTTCATAATAATAAAATTATTCCAACTGGAATAATTTTATCTTCAATATCTATGCTAGGTTTAATATTATGTACACTAACAATAAATATCTTTTAAAGGCTTTAAGTTAATTTTAAACTAATATCCTTCAAAGCTATAAATAAAGATTAAATTTCTTTAAGCCTTAGTAAATAATTTACTCCTATAGAATTGCATTCTATTATCATACAAAATATGAATATAAGACCTTTAACAAATTTATTCATTCTTGATAGTAGAAGAGAAATAATTCTCCTTAATAGATTTACAATCTATCACCTATTCAACCTCAGCCATTCTACTAACTTTGCAACGATGAATATTTTCAACAAATCATAAAGATATTGGAACATTATATTTTATTTTCGGTGCCTGATCAGGTATAGTGGGAACATCACTAAGAATATTAATTCGTGCTGAGCTCGGGCAACCAGGTTCACTAATTGGAGATGATCAAATTTATAATGTAATCGTTACTGCCCATGCCTTCATTATAATTTTCTTTATAGTAATACCAATCATAATTGGGGGATTTGGTAATTGATTAGTACCACTAATATTAGGAGCCCCAGATATAGCCTTCCCACGAATAAATAATATAAGATTCTGATTATTACCACCTTCATTAACT",
      "detected_biotype": "DNA",
      "gc_percent": 25.8342,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 74.9122,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Periplaneta americana (American Cockroach Blattodea Outgroup)",
      "pct_identity_vs_centroid": 74.9122,
      "query_coverage_pct": 99.6071,
      "raw_length_bp": 15584,
      "replacement_for_accession": null,
      "sector_code": "[A]",
      "sha256_prefix": "f2f835503959",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 1868.6747,
      "super_blast_e_value": 1e-180,
      "tip_code": "A:T001"
    },
    {
      "accession": "NC_012901.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Blattodea Outgroup (Ectobiidae)",
      "cleaned_sequence": "AATGAAGTGCCTGATAAAAAGGATTATCGTGATAGGATAAATCATGTAATTATTGTTACCTTCATTAATTTTCTACATTTAATAGAATTAAACTATCCCCTAGAATATCAAAAATTCTTGTGCACCATACACCAAAATGTATAACCTTAGAAAAGTAAGCTAAATAAAGCTAATGGGTTCATACCCCATTTATAGAGGAAGGGCCTCTCTTATCGCAATGTCCAATAATTCGACCAAAATTCTTTTTTTAACAACCTTAATTAGAGGGATTTTTATTACAATCTCCTCTAATTCTTGACTAGGGGCGTGAATAGGATTAGAAATCAACCTTCTATCCTTCATCCCAATTATGTCAAGAAACGAGAATATTTTTACAACCGAAGCTTCCTTAAAATATTTTCTCGTTCAAGCCTTAGCTTCATCAGTATTATTGTTTTTGATTATTTCTAAGACAATAATAGAAGATATATTTTCCTTAATAAATTCCCAATTATCTAGAATAATCATGAGAACACCTTTATTACTTAAGGGTGGAGCTGCACCATTTCATTGATGGTTTCCGAGTGTAATAGAAGGTTTAACTTGAAGAAACTGTTTTATTTTAATAACACTACAAAAGATTGCGCCATTAATTTTAATTTCATATTTAATTAAAATATCAGTATTTTACTCGACAATTATTGTCTTATCTGTCATGATTGGGTCTATTGGTGGTTATAATCAAATTTCAATTCGTAAAATTTTAACTTATTCATCAATTAACCATATAGGATGAATATTGTCTGCTATACTTTTGGGAGAAAATATATGATTAATGTATTTTTCAATTTACTCCTTCTTAACTTTAACAATTATTTCAATTATTTCACCATTTCAGATTTCATTTATTAATCAAACATTTTTATTTAATAATGATAACCCAACTATAAAATTTTTACTATTTACGTCTTTACTTTCATTAGGAGGTTTACCACCTTTTCTAGGATTTTTACCTAAATGATTCATTATTCAATCAATAGTAAATAATGGAATATCTTTCATTATTACAATTATAGTTGTGTTGTCATTAATTACATTATATTATTATCTACGTATTTCCTACTCCTCATTTATAATTTTACACTCGGAACCGTCATGAAATATTCAAATTCATAAAAATAAAATTATATTAACAACTCTAATCCTTTCATCTTTATCGATATTAGGTTTAATTATATGTTCAGCCGTAATTATTATTTATTAAGGCTTTAAGTTAATTTAAACTAATATCCTTCAAAGTTATAAATAAAGATTATTTTCTTTAAGCCTTAGTAGTTTTACTACTCCTACAGAATTGCATTCTATTATCATTTCATGAATATAAAGCTTAGTAGAAGAGTTTTGAACTCCTTAATAGATTTACAATCTATCACCTATTACTCAGCCATTCTACTAACTTGAAACGATGAATATTTTCAACAAATCATAAAGATATTGGAACTCTTTATTTTATCTTCGGAGCTTGATCTGGAATAGTGGGGACATCTTTAAGAATATTAATCCGAGCAGAGCTAAATCAACCTGGTTCATTAATTGGAGATGATCAAATCTATAATGTTATTGTAACGGCTCACGCTTTTGTTATAATTTTCTTTATAGTTATGCCAATTTTAATTGGAGGATTTGGAAATTGATTAGTACCTTTAATATTAGGTGCTCCTGATATAGCATTTCCTCGTATAAATAATATAAGTTTTTGACTTTTACCTCCATCTCTATCTCTTCTATTAGCTAGTAGCCTTGTTGAAAGAGGAGCTGGGA",
      "detected_biotype": "DNA",
      "gc_percent": 25.4443,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 72.0889,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Blattella germanica (German Cockroach Blaberoidea Outgroup)",
      "pct_identity_vs_centroid": 72.0889,
      "query_coverage_pct": 98.25,
      "raw_length_bp": 15025,
      "replacement_for_accession": null,
      "sector_code": "[A]",
      "sha256_prefix": "bdd714acb05f",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 1499.8858,
      "super_blast_e_value": 1e-180,
      "tip_code": "A:T002"
    },
    {
      "accession": "NC_018132.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Xylophagodea Outgroup (Cryptocercidae)",
      "cleaned_sequence": "AATGGAATGCCTGAATAAAGGATTATCGTGATAGGATAAATAATGTAAAAATTACTTCCATTAAACACCTAACAGAATTAAACTATTACCAGAAACATCAAAAATTACTATGCACCATACACCAAAATGTATTACACTAGAAAAGTAAGCTAATAAAGCTAATGGGTTCATACCCCACCTATAGAGGAAATCCTCTCTTATCTAATGCCCAACAACCCAACAAAAATCCTCTTAATATTAACAATAATAAGAGGTATTTTAATTTCAATCTCATCCAATTCATGAATTGGAGCATGAATAGGACTAGAAATTAATCTAATATCATTTATCCCACTAATATCCAATAGCAAAAATACCTATACAACAGAATCATCACTTAAATACTTTATCATCCAAGCCATAGCATCCTCATTCTTACTGTTCATTGTTGTAATAAAAGCAATAACAGAAGATATATTTACAATAGGAAATGATAATATTAACACAATAATTATCATAACCCCCCTATTATTAAAAAGAGGTGCAGCCCCCTTTCATTGATGATTTCCAAGAGTAATAGAAGGAATAAGATGAATAAACTGCTTATTATTAATAACTATACAAAAAGTAGCCCCAATAATAATAATTTCATACATAATAAAAATAAATTCATTCAGATCAATTATCATTCTTTCATCAACTATTATTGGAGCCATTGGAGGATTAAATCAATTATCGATTCGAAAAATCTTAACTTATTCATCAATTAACCATACAGGATGAATATTAGCAGCATTAATAATTAACGAAAACATATGAATTTTATATTTTATAATCTACGCAACACTTACAACAACAATTGTAATAATTATTAAACCATTCAATACATCATTTATCAACCAAACATTTTTAATAAATAAGGAAATAAATACAATAAAATTTATAATATTCACAACACTTCTGTCAATAGGTGGACTACCACCATTCATGGGATTCTTACCTAAATGAATTATTATTCAAATAATAATTATGAATAACATAAATATTATCATAACAACAATAGTAGTAATATCACTAATAACACTATATTTCTATTTACGGATTAGTTACTCAAGATTTATAATATTACATTCTGAACCAAAATGAAACATTAGATACTATAAAAATAATAACTTCATGATGTACGCATCAGCTATATTTTCAATATCAATAATAAGTTTAATAATTTGCACTATAATAATTAACATCTACTAAAGGCTTTAAGTTAAAATAAACTAATATCCTTCAAAGCTATAAATAAAGAAGTTCTTTAGGCCTTAGAAATAATATTACACCATCAGAATTGCATTCTAATATCATTAAATGAATATAAAACCTAGTAGAAGAGAATTTGTCCCCTAAATAGATTTACAATCTATAGCCTAATTATTAACTCAGCCATTCTACTAAAATTGAAACGATGAATATTCTCAACGAACCATAAAGACATTGGAACTCTATATTTTGTATTCGGAGCATGATCAGGAATAGTAGGAACATCATTAAGAATATTAATCCGAACAGAACTAGGACAACCTGGGTCATTAATCGGGGACGATCAAATCTACAATGTAATCGTAACTGCACACGCATTTGTCATAATTTTCTTTATAGTAATACCAATTCTTATCGGAGGATTTGGTAACTGATTAGTACCTTTAATACTAGGAGCACCTGATATAGCATTCCCACGAATAAATAATATAAGATTCTGGTTATTACCTCCATCACTTTCGCTCCTGTTAACAAGAAGAATAGTGGAAAGAGGAGCCGGAACAGGAT",
      "detected_biotype": "DNA",
      "gc_percent": 26.4692,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 77.2727,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Cryptocercus relictus (Palaearctic Subsocial Wood-Roach Sister)",
      "pct_identity_vs_centroid": 77.2727,
      "query_coverage_pct": 97.75,
      "raw_length_bp": 15373,
      "replacement_for_accession": null,
      "sector_code": "[A]",
      "sha256_prefix": "95861ce59f0e",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2143.6884,
      "super_blast_e_value": 1e-180,
      "tip_code": "A:T003"
    },
    {
      "accession": "NC_030191.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Xylophagodea Outgroup (Cryptocercidae)",
      "cleaned_sequence": "AATGGAATGCCTGAATAAAGGATTATCGTGATAGGATAAATAATGTAAAAAATTACTTCCATTACACTTAACAGAATTAAACTATTACCAGAAATATCAAAAATTACTATGCACCATACAACAAAATGTATATTATAGAAAAGTAAGCTAATAAAGCTAATGGGTTCATACCCCACCTATAGAGGTAATCCTCTCTTATCTAATGCCCAACAACCCAACAAAAATCCTCTTAATATTAACAATAATAAGAGGTATTTTAATTTCAATCTCATCCAATTCATGAATTGGAGCATGAATAGGACTAGAAATTAATCTAATATCATTTATCCCACTAATATCCAATAATAAAAACATTTATACAACAGAATCCTCACTTAAATACTTTATTATCCAAGCCATAGCATCATCATTTTTATTATTCATAATTATAATAAAAGTAATAATAAAAGATATATTTACAATAGAAAATAACAATATTAACACAATAATTATTATAACCCCTTTACTACTAAAAAGAGGAGCAGCTCCCTTTCATTGGTGATTCCCAAGAGTAATAGAAGGAATTAGATGAATAAACTGTTTACTACTAATAACTATACAAAAAGTAGCCCCAATAATATTAATTTCATACATAATAAAAATAAATCCATTTAGATCAACAATTATTTTAATATCCACTATTGTAGGAGCCATTGGAGGTTTTAACCAACTATCAATCCGAAAAATTTTAACCTACTCATCAATTAATCATACTGGATGGATATTAGCAGCACTAATAATTAACGAAAATATATGAATTATATACTTCACAATTTATTCAATACTAACAACAACAATCGTAATAATTATTAAACCATTCAATACATCATTCATCAATCAAACACTTTTAATAAACAAGGAAATAAATTCAATAAAATTTATAATATTTACAACACTATTATCAATAGGAGGATTACCACCATTCATAGGATTCCTACCCAAATGAATTATTATTCAAATAATAATTATAAACGATATAAACATCATTATAACCACAATAGTAGTAATATCATTAATAACACTATATTTCTATCTACGAATTAGTTATTCAAGATTCATAATACTACATATTGAGCCAAAATGAAACATTAGATACTACAAAAATAATAATTTCATAGTATATACATCAACAATATTTTCATTATCAATAATAACCCTAATAATTTGCACTATAATAATTAACATTTATTAAAGGCTTTAAGTTAAAACAAACTAATATCCTTCAAAGCTATAAATAAAGAAATTCTTTAGGCCTTAGAAATAATATTACACCATCAGAATTGCATTCTAATATCATTAAATGAATATAAAACCTAGTAGAAGAGAAATTATCCCCTAAATAGATTTACAATCTATAACCTAATATTACCTCAGCCATTCTACTAAAATTGAAACGATGAATATTTTCAACAAATCATAAAGATATTGGAACTTTATATTTCATCTTCGGAGCATGATCAGGAATAGTGGGAACATCACTAAGAATATTAATCCGAACAGAACTAGGACAACCTGGATCATTAATTGGAGATGATCAAATCTACAATGTAATTGTGACTGCCCATGCATTTGTAATAATCTTCTTCATAGTAATACCAATTCTTATTGGAGGATTTGGTAACTGATTAGTACCTTTAATATTAGGAGCCCCTGATATAGCATTTCCCCGAATAAACAACATAAGATTTTGATTATTACCTCCATCACTATCACTATTACTAACAAGAAGAATAGTAGAAAGAGGAGCTGGTACAGGATGAA",
      "detected_biotype": "DNA",
      "gc_percent": 25.5885,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 77.3699,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Cryptocercus kyebangensis (Korean Relictual Wood-Roach Sister)",
      "pct_identity_vs_centroid": 77.3699,
      "query_coverage_pct": 97.6429,
      "raw_length_bp": 15720,
      "replacement_for_accession": null,
      "sector_code": "[A]",
      "sha256_prefix": "065bf3b67ff8",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2162.6238,
      "super_blast_e_value": 1e-180,
      "tip_code": "A:T004"
    },
    {
      "accession": "NC_018120.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Basal Isoptera (Mastotermitidae)",
      "cleaned_sequence": "AATGAAGTGCCTGATTAAAGGATTATTGTGATAGAATAATTAAAGTAGATTTAATCTACCTTCATTACGTCTAATAGAATCAAACTATTACCAGAAACATCAAAAATTCCCGTGCATCATACACTAAAACGTAATACAGAAAAGTAAGCTAAATATAAGCTAATGGGTTCATACCCCATCTATAGGATTATTCCTCTTCTCTAATGCCAAACAACTCAACAAAAATCCTTCTTATGATTACTTTATTAAGCGGGGTTCTCATTTCTGTATCAGCAAACTCATGATTTGGTGCTTGAATAGGCTTAGAAATTAATTTACTCTCATTTATCCCACTTATGTCAAATATCAACAATATTTACACAACAGAGGCATCGCTAAAATACTTTCTCGTTCAAGCAATAGCATCATCAATTTTACTTTTCCTGGTAATAGTAATAGCTCTAGCAGACAATTTATTCTCGTTTGAATGAAGAATTTACTCATCAGTAGCAATTTCCACCCCCCTTCTTCTCAAAATAGGTGCCGCTCCGCTCCACTGATGATTCCCAAGAGTAATAGAAGGGCTGGAGTGAACAGGATGTTTACTACTAATAACAGTGCAAAAAATCTCTCCATTTATCCTAATCTCATACCTGCTTAAAATAAATCTATTCCTGGCTAGAATTATTATAACATCAGTAGCAATTGGGTCAATTGGAGGTATTAATCAAACGTCACTACGTAAAATTTTAACTTATTCATCTATTAATCACACAGGATGGATACTATCAGCAATAAGCCTAAGAGAAAGCATGTGATTATTATATTTCTCCATTTATTCATTACTGACGACGACAGTCATCTCCATCATTAAACCCTTCAAACCCTCATTCATTAACCAATTGATAATAATAAAAAAAGAAATAGTGATTACAAAATTCCTTATATTCACCAGCCTTCTATCTCTAGGTGGGTTACCACCATTCCTAGGATTTATACCCAAATGAGTTATTATTCAAGAGATGACCGCCAACAAACACTACTTCCTAATTACATTTATAGTAATAGGATCACTACTTACATTATATTATTATCTACGTATTTGTTATTCAAGATTCCTAATTTTACATACAGAATTAAAATGAAATAAACAATTTTCCAGAAACCAATTCTACACGTTATGTAGATCCTTCCTATCCTTCCTATCCTTAACAGGTCTAGTATTATGTACTATATTCACAGGTATAATTTAAGTCCTTAAGTTAACATAAACTAATAGCCTTCAAAGCTATATATAAAGATACATCTTTAGGCCTTAATAATAATTCATTACCCCTCCAGATTTGCAATCTGATATCACTTCGTGAATATAAGGCCCATATAGTAGAAGAGTAATCACTCCTTAATAGATTTACAATCTATCACCTCTATCTCAGCCATTCTACTAATTATTAAACGATGATTATTCTCGACAAACCACAAAGACATTGGAACTCTTTACTTTATTTTTGGTGCCTGATCAGGTATAGTAGGCACATCATTAAGTATATTAATTCGGGCCGAATTAGGTCAACCAGGATCATTGATTGGAGATGACCAAATTTATAACGTAATTGTAACAGCTCACGCGTTCGTTATAATTTTCTTTATAGTTATACCAATTATGATTGGAGGGTTTGGGAACTGATTAGTCCCCTTAATACTAGGTGCACCAGATATAGCCTTCCCGCGAATAAATAATATAAGATTTTGGTTACTCCCACCATCTCTCACACTTCTTTTAACAAGAAGAATAGTTGAAAGTGGAGCAGGAACAGGGTG",
      "detected_biotype": "DNA",
      "gc_percent": 31.9817,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 74.9028,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Mastotermes darwiniensis (Basal Australian Giant Relict Termite)",
      "pct_identity_vs_centroid": 74.9028,
      "query_coverage_pct": 98.0,
      "raw_length_bp": 15487,
      "replacement_for_accession": null,
      "sector_code": "[B]",
      "sha256_prefix": "e738ba29a541",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 1869.5764,
      "super_blast_e_value": 1e-180,
      "tip_code": "B:T005"
    },
    {
      "accession": "NC_024658.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Basal Isoptera (Archotermopsidae)",
      "cleaned_sequence": "AATGGAGTGCCTGAAAAAGGATTACTATGATAGGGTAAATAATGTATAAAAATACCTCCATTACGTTAAATAGAGTCAAACCATTCCCTGAAATATCAAAAATTCCCGTGCACCATACACTAAAACGTAAAAATTAGAAAAGTAAGCTAATAAAGCTAATGGGTTCATACCCCATAAATAGAGTAAATACTCTCTCTTCTAATGCCCAACAACTCAACAAAAATCCTCTTATTAACAACGTTAACAAGAGGTATTTTAATCTCAATTTCCTCTAATTCATGATTTGGAGCATGAATGGGGTTAGAGATTAATTTACTATCATTTATTCCAATAATGATAGAAAAAAAAAATATCTACACCACAGAAGCCTCACTAAAATACTTTATTGTACAAGCAGGGGCTTCATCAATACTATTATTCATAGTAATAATAAGAGCAATAGAAGAAAGAATATTAATTAACTCGGACAACTTATATACACAAATATTAATAAACACACCCCTATTACTAAAAGGGGGGGTCGCCCCAATACATTGGTGATTCCCTGGAGTAATGGAGGGGTTAAACTGAAATAATTGCTTAATTCTAATAACTCTACAAAAATCCGCACCCCTATCCTTAATCTCATACCAAATTAACAATGATATATTCCTAGAAATAATCATTGTAACATCAGTAATAATTGGAGCTATCGGGGGATTAAATCAAACATCACTACGAAAAATCATAACATACTCATCAATTAACCACACAGGTTGAATAATATCGGCAATAATTACAGGAAATGATATATGAGTAACATATTTCACAATCTACTCAATACTAACATTAACAGTAGTGTCGATTGTAAAAACCACCAAATTATCTTTCGTTAACCAAATAGCAATAACAGAAAAGAAGAACAAACTAACAAAATTCCTTGTATTCACAAGAATTTTATCATTAGGAGGTTTGCCGCCATTCTTGGGATTTATACCAAAATGAATAGTCATTCAAGCTATAATAACCAACGAAATAAAAACAACAGCCACAATAATGGTTTTAATATCAGTAGTAACGTTATATTACTACATACGAATGACATACTCAAGTTTAATAATACTACACCTAGAAACAAAATGATTAATTGCCCAACCTATTAATAAAACACCTAAACACATTATTTTATTAACATCAATCTCAATTACGGGGTTAATAATATCAGAAATAATCATGAACTTAGATTAAAGGCTTTAAGTTAAACAAACTAATATCCTTCAAAGCTATAAATAAAGAAAATCTTTAAGCCTTAGTAGCAAAACTACCCCTATAGAATTGCATTCTATAATCACCTAATGAATATAAAGCTATAGTAGAAGGGAAAATCCCATAAATAGATTTACAATCTATCACCTAAAATCAGACATTCCACTAATAATTAAACGATGGTTATTCTCAACAAACCATAAAGATATTGGAACATTATACTTCATCTTCGGGGCATGATCCGGAATATTAGGAACATCATTAAGAATATTAATCCGAGCAGAACTTGGTCAACCAGGATCCTTAATTGGAGACGACCAAATTTACAATGTAATCGTAACCGCACATGCATTTATCATAATCTTTTTCATGGTTATACCAATTCTAATTGGGGGTTTTGGAAATTGATTAGTACCACTCATACTTGGGGCCCCTGATATGGCATTTCCACGAATGAATAACATAAGATTTTGACTACTCCCACCCTCACTTACACTCCTCCTAACCAGAAGTATAGTAGAAAGAGGAGCTGGAACAGGGTGAACAGTGTATCCC",
      "detected_biotype": "DNA",
      "gc_percent": 30.6592,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 76.1178,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Zootermopsis nevadensis (Nevada Dampwood Termite RefSeq)",
      "pct_identity_vs_centroid": 76.1178,
      "query_coverage_pct": 97.5357,
      "raw_length_bp": 15444,
      "replacement_for_accession": null,
      "sector_code": "[B]",
      "sha256_prefix": "cd608c2011dd",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2005.7307,
      "super_blast_e_value": 1e-180,
      "tip_code": "B:T006"
    },
    {
      "accession": "NC_018123.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Basal Isoptera (Archotermopsidae)",
      "cleaned_sequence": "AATGGAGTGCCTGAAAAAGGATTACTATGATAGGGTAAATAATGTATAAAAATACCTCCATTACGTTAAATAGATTCAAACTATTCCCTGAAATATCAAAAATTCCCGTGCACCACACACTAAAACGTAATTTTTAGAAAAGTAAGCTAATAAAAGCTAATGGGTTCATACCCCATAAATAGAGTAAACACTCTCTCTTCTAATGCCCAACAACTCAACAAAAATCCTCTTATTAACAACGTTAACAAGAGGTATTTTAATCTCGATTTCCTCTAATTCATGATTTGGAGCATGAATAGGGTTAGAGATTAATTTACTATCATTTATTCCAATAATGGTAGAAAAAAAAAACATCTATACTACAGAGGCCTCGCTAAAATACTTTATTGTACAAGCAGGGGCTTCATCAATATTACTATTTATGGTAATAATAAGAGCACTAGAGGAAAGAATACTAACTAATTCAGATAACTTATACACACAAATATTAATCAACACACCCTTACTATTAAAAGGAGGGGTTGCCCCAATACATTGATGGTTCCCTGGGGTAATAGAAGGATTAAATTGAGATAATTGTTTAATTTTAATGACTTTACAAAAAGCTGCACCACTATCCCTAATCTCATACCAAATTAACAATGATGTATTCTTGGGAATAATTATCATATCATCAGTAATAATTGGAGCTATTGGAGGCTTAAATCAAACATCATTACGAAAAATCATAACATACTCATCAATCAATCACACAGGGTGAATAATATCAGCAATAATTACAGGAAGTGATATATGAGTAATATACTTCACAATTTACTCAATACTAACATTAACAGTAGTATCAATTGTAAAAACTACTAAATTATCCTTCATCAACCAAATAGCATTAACAGAAAAAAAAAACAAGCTAACAAAATTCCTTGTGTTCACAAGAATTTTGTCATTAGGAGGTTTGCCCCCATTCCTAGGATTTATACCAAAATGAATAATTATCCAAACAATAATAACCAATGATATAAGAACAACAGCCACAATAATAGTCCTAATATCCGTAGTAACATTATACTATTACATACGAATATCTTACTCAAGTTTAATAATTCTACACTCAGAAACAAAATGACTAATTGCCCAACCTACTAACAAAATACCCAAATACATTATTTTACTAACATCAGTTTCAGTAATAGGACTAATAGTATCAGAGACAATCATAACATAAAATAAAAGGCTTTAAGTTAAGCAAACTAATATCCTTCAAAGCTATAAATAAAGAAAATCTTTAAGCCTTAGTAGTAAAACCTACCCCTATAGAATTGCATTCTATAATCACCTAATGAATATAAGACCATAGTAGAAGGGAAAACCCCATAAATAGATTTACAATCTATCACCTAAAAATCAGACATTCCACTAATAATTAAACGATGATTATTCTCAACAAACCATAAAGATATTGGAACATTATATTTCATTTTCGGAGCATGATCCGGAATACTAGGAACATCACTAAGAATGTTAATCCGAGCAGAGCTAGGTCAACCAGGATCTCTAATTGGAGATGACCAAATTTACAATGTAATTGTAACTGCACATGCATTCATCATAATTTTTTTCATAGTTATACCAATCCTAATTGGAGGTTTCGGAAACTGATTGGTCCCACTTATACTAGGAGCCCCTGATATAGCATTCCCCCGAATGAACAACATAAGATTTTGATTACTTCCACCCTCACTTACACTCCTCCTAACAAGAAGCATAGTAGAAAGAGGAGCTGGGACAGGATGAACGGTATAC",
      "detected_biotype": "DNA",
      "gc_percent": 30.6013,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 76.5082,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Zootermopsis angusticollis (Pacific Dampwood Termite RefSeq)",
      "pct_identity_vs_centroid": 76.5082,
      "query_coverage_pct": 97.6429,
      "raw_length_bp": 15483,
      "replacement_for_accession": null,
      "sector_code": "[B]",
      "sha256_prefix": "052678bd8b57",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2058.0284,
      "super_blast_e_value": 1e-180,
      "tip_code": "B:T007"
    },
    {
      "accession": "NC_018121.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Basal Isoptera (Stolotermitidae)",
      "cleaned_sequence": "AATGAAGTGCCTGATAAAAGGGTTATCGTGATAGGGTAAATAATGTACCAAAAAATACCTTCATTACATCCAATAGACTCAAACTATCCCCTAAAACATCAAAAGTTCTCGTGCACTATACACCAAAATGCATCGCAATGGAAAAGTAAGCTAAGGTAAGCTAATGGGTTCATACCCCATAAATAGAGTAAATCCTCTCTTCTCTACATGCCTAACAACTCAACAAAAATCCTTCTATCAACAACACTAATAACGGGAATCTTGATCGCTATTTCCTCCAATTCATGATTTGGGGCATGAATAGGATTAGAAATCAACCTACTATCATTTATCCCACTAATACTAACATACAACAATGTATATACAACAGAAGCCTCAATAAAGTATTTTATTGTACAAGCCTTAGCCTCCTCCACACTATTATTTATAATAGTAATAAGATCTCTCTCCGAGAGAATCTTCTCCCTATCAAAAGATACATTCGTATCAATTACCATTATAACCCCTCTTATAATAAAAAGTGGAGCTGCCCCCCTCCACTGATGATTTCCAAGAGTTATGGAAGGACTAAGCTGAAACAACTGCATTCTACTAATAACAGTACAAAGGGTTGCCCCACTAATATTAATTTCTTACCAGTTAAATATTAATCTATTCTCAGCTACATTCATTATAATATCCGTAATCACAGGATCGATTGGCGGATTCAACCAAACATCCTTACGTAAAATTATAACTTACTCATCTATTAATCACACAGGATGAATACTATCCGCTATATTGGTGAGAGAAAATCTATGAATCATGTACTTCACTATCTATTCAATATTAACTACAACTGTAGTTGCAATCATTAAACCATTCAACACTTCATTTGTGAATCAAGTAATAATGATCAACGAAAAAATAAAGCTAATGAAATTCATGATATTCATATCATTACTGTCATTAGGGGGATTACCCCCATTTTTAGGATTCCTCCCAAAATGAATAGTTATCCAATCCATAATAATGAACAATATAGGACTCATAATAACAATTATAGTAATCATATCAATTGTAACCCTATACTACTATTTACGAATATGCTACTCAAGATTCATAATCTTACACGACGAAGTAAAATGAGCCAAGAAAACCTTCACAAACAATAAGAAAAACACCCGTAGAACAACATTAGCATCAGTATCAATGCTAGGATTAACATTATGTACAATAGCCTTCAACGTCAGATAAAGGCTTTAAGTTAAATAAAACTAATATCCTTCAAAGCTATAAATAAAGAAGATTCTTTAAGCCTTAGTAGTATTCTAACCCACCCCTATAGAATTGCATTCTATTATCACAAATATGAATATAAGACCAAATAGTAGAAGAGTAACAACCCCTTAATAGATTTACAATCTATCACCTTTAACCTCAGTCATTCTACTAATCATTCAACGGTGGATATTCTCAACCAATCACAAAGACATTGGCACACTATATTTTATCTTCGGGGCGTGAGCAGGTATAGTAGGAACATCTCTAAGAATATTAATTCGCACAGAACTAGGGCAACCAGGATCTTTAATTGGGGACGATCAAATCTACAACGTAATCGTAACAGCACACGCATTTGTCATAATTTTCTTTATAGTAATACCAGTTATAATTGGAGGATTCGGAAATTGATTGGTACCATTAATACTAGGAGCACCAGACATAGCCTTTCCACGAATAAATAATATAAGATTCTGATTATTACCACCATCACTTACACTTCTACTAACTAGTAGAATAGTAGAAAGAGGGGCCGGT",
      "detected_biotype": "DNA",
      "gc_percent": 33.1816,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 76.2628,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Porotermes adamsoni (Australian Dampwood Termite RefSeq)",
      "pct_identity_vs_centroid": 76.2628,
      "query_coverage_pct": 98.2857,
      "raw_length_bp": 16039,
      "replacement_for_accession": null,
      "sector_code": "[B]",
      "sha256_prefix": "a88dbd21359d",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2016.5509,
      "super_blast_e_value": 1e-180,
      "tip_code": "B:T008"
    },
    {
      "accession": "NC_068655.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Basal Isoptera (Stolotermitidae)",
      "cleaned_sequence": "AATGAAGTGCCTGACAAAAGGATTATCGTGATAGGGTAAATAATGTACCAAAAATACCTTCATTACATCCGACAGAATTGAACTATCCCCTAAAACATCAAAAGCTCTTGTGCACTATACACTAAAATGTATCACAATGGAAAAGTAAGCTAAAGTAAGCTAATGGGTTCATACCCCATAAATAGAGTAAATCCTCTCTTCTCTAATGCCTAACAACTCAACAAAAATCCTCCTATCAGGAACTCTAATGGTGGGGATCTTAATTTCCGTATCATCCAACTCGTGATTTGGGGCATGGATAGGACTTGAAATCAATTTACTATCATTCATCCCGATAATATTAATGCACAACAACGTGTATACAACGGAAGCTTCAATAAAGTATTTCATTGTACAGGCTTTAGCCTCCTCCACATTATTATTCATGATAATAATAAGATCTCTCTCTGAGAGAATCTTCTCTCTTGAGAAAGAAACATTCATATCAATTGCCATCGTAACTCCTCTCATAATAAAGAGCGGAGCGGCACCACTTCACTGATGATTTCCGAGAGTTATAGAGGGGCTAAGATGAAACAACTGCATCCTACTAATAACAGTACAGAAAATTGCCCCGCTCATGCTAATTTCTTATCAAATGAGCATTAACCTAATCTCGGCAGCATTTATTCTAACATCTGTAGTAATGGGGGCAATCGGTGGGTTTAATCAAACGTCCCTACGCAAGATCATAACCTACTCATCCATCAACCACACAGGTTGAATACTATCTGCTATACTAGTGAGAGAAACCCTATGAATCACCTACTTCACTATTTATTCAATACTATCCGCAACCGTAGTAACAATTATTAAACCATTCAATATTTCATTTATCAACCAAGTAATAATAATTAATGAAAAAACAAAACCAGTAAAATTCATAATATTTATATCTCTATTATCACTAGGGGGACTCCCCCCATTTTTGGGATTCCTCCCAAAATGAATAGTTATCCAATTTATAATATTGAACAACATGAGACTTATAATTACAATCATAGTGATTATATCAATCGTAACTTTATATTACTATCTACGAATATGCTACTCAAGATTTATGATTTTACACGATGAGGTAAAATGGGGCAAGATAACCTTTATAAACAACATAAAGAATACTCATAGAATAATCTTAGCATCAACATCAATGCTAGGGTTAGCATTATGTACAGCAATCTTTAATATCAGATAAGGCTTTAAGTTAAATAAAACTAATATCCTTCAAAGCTATAAATAAAGAAAATTCTTTAAGCCTTAGTAGCATGTAAACCACCCCTATAGAATTGCATTCTATTATCACAAATATGAATATAAGACCAGATAGTAGAAGAGTAATAACTCCTCAATAGATTTACAATCTATTACCTATAATCTCAGCCATTCTACTAATTATTCAACGATGGATATTTTCAACCAATCACAAAGACATTGGCACCCTATACTTTATTTTTGGGGCATGAGCAGGCATAGTAGGAACATCCCTAAGAATATTAATTCGTACAGAATTAGGCCAACCGGGGTCCCTAATTGGAGATGATCAAGTTTATAACGTAATTGTAACAGCACACGCATTTGTTATGATTTTCTTTATAGTAATACCAATTATAATTGGAGGGTTCGGAAACTGGTTAGTCCCGCTAATACTAGGGGCACCAGATATGGCTTTTCCACGAATAAACAATATAAGATTCTGACTATTACCACCGTCACTTACATTACTATTAACCAGAAGAATAGTGGAAAGAGGTGCTGGAACAG",
      "detected_biotype": "DNA",
      "gc_percent": 34.1061,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 76.1989,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Porotermes quadricollis (Patagonian Temperate Dampwood Termite)",
      "pct_identity_vs_centroid": 76.1989,
      "query_coverage_pct": 98.1429,
      "raw_length_bp": 15701,
      "replacement_for_accession": null,
      "sector_code": "[B]",
      "sha256_prefix": "e48f7982e56c",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2003.0257,
      "super_blast_e_value": 1e-180,
      "tip_code": "B:T009"
    },
    {
      "accession": "NC_077466.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Basal Isoptera (Hodotermitidae)",
      "cleaned_sequence": "AACAAAAGGACAAAAAGGAACAAAAATCCAACTAAGAGAAAAAAAAGAATCCACCAACAAAAAAAAGAAGGGAGTAACACACTTATAGGTCCCATTTTTTTTTTATCTACAAATGGGACCTATAAGTGTGAAATGAACAACTTATATATCCAATAATTGATGCATGAATTAACAATTGTTATAATATAATTGATTTAATCGGATAGATTTATTTAATTGAATAAAATAACCTAACTCTACAAGAATTAAATTTGTTATTGAATAAGATTCAATTCCATCAATTTAAATATTTTATTATAAAATTAACAAAATCCCCCTATAAGCTCTTTTATTTAAATGTATCAATTATTTTACATGAAGTTCTTATATTAAAATGAAAAAAAAATCAAAACTCATCCCTAAACCCACTCAAAATCACTCATCATAAATAAATTAAACAATAAAAAGAACAACAAGACCGGAACAAAAAAAATAAATGGAAAATAAAAATGGGGTGCCTGAAAAAGGATTACAATGATAGAGTAAAACATGCATCACAAATGATGCCCCCATTATTCAATTGCATAAAGTAGAATCAAACTACTACCAAAAGTATCAAAAACTCACGTGCTCCATACACCAAAATGCAACAAAACAAAGAAAGGTAAGCTAAAAAAGCTAATGGGTTCATACCCCGTAAATAGAGACAGACACTCTCCATTCTAATGTCCAACAACTCAACAAAAATTCTCTTATTAACAACACTAATAAGAGGTATTATAATCTCCATTTCATCAAACTCATGATTTGGAGCATGAATAGGACTAGAAGTAAACCTCCTCTCATTCATCCCATTAATAATAAATCAAAACAACATCTACACTACAGAATCCTCAATTAAATATTTCATTGTCCAAGCCGCAGCATCATCATCACTACTATTCCTAGTGTTAACAAAAACTATAATAGAAAACATAACCCCAATACCAGAAAGAAATTTCTCATCAATTATCATCAACACACCACTACTATTAAAAAGAGGAGCAGCACCATTCCACTGATGATTCCCAGGAGTAATAGAAGGATTGGATTGAAGAAACTGCTTATTGCTAATAACAGTACAAAAAATAGCCCCACTAATATTAATTTCCTACCAAACAAGTACACAAATACCATTTATGACAACCATCATCCTAATATCAGCCATTGTAGGAGCAATCGGAGGAATAAATCAAACCTCACTACGTAAAATTATAACCTACTCATCGATCAACCACACTGGTTGAATATTAGCTGCAATAACCATTAGAGAAAACTTATGAATCATATACTTCGCAATCTATTCACTACTAACCACAACAGTAGTAACCATTATCAAACCATTCAATTTATCATTCATCAACCAAGTAATAATAACGAACAAGAAAAACGTGACGGCAAAAATCATAATGTTCATAACACTACTATCACTAGGAGGACTCCCACCATTCCTTGGATTCCTACCAAAATGAATTACCATCCAAGCAATAATTAACAACAACATGATATCAATTGCAACAATCATAGTAATCATATCAGTAATGACCCTATACTACTACCTACGAATTTGTTACTCAAGATTCATAATCCTACACGACGAGCCAAACTGAAACACAAAATCCCACATGAACAACAAAATAACCAATTATAGAATAATCTTATCAGCAATCTCAACAATAGGATTAGCAGCATGCACAATAATAATCAACACCTTATAGACAAAAATAAATAAAGGCTTTAAGTTAAATAAAACTAATATCCTTCAAAGCTATAAATAAAGAA",
      "detected_biotype": "DNA",
      "gc_percent": 31.9761,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 74.9157,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Hodotermes mossambicus (African Harvester Termite RefSeq)",
      "pct_identity_vs_centroid": 74.9157,
      "query_coverage_pct": 82.6071,
      "raw_length_bp": 15571,
      "replacement_for_accession": null,
      "sector_code": "[B]",
      "sha256_prefix": "edc6327e304f",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 1560.2986,
      "super_blast_e_value": 1e-180,
      "tip_code": "B:T010"
    },
    {
      "accession": "PZ764336.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "QUARANTINED_NUMT",
      "chimera_5p_3p_delta_pct": 1.8,
      "clade_group": "Kalotermitidae Drywood Clade",
      "cleaned_sequence": "",
      "detected_biotype": "DNA",
      "gc_percent": 26.1809,
      "included_in_cleaned_cohort": false,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 2,
      "locus": "Mitochondrial Genome (UNVERIFIED)",
      "nearest_neighbor_accession": "NC_056118.1",
      "nearest_neighbor_identity_pct": 75.9967,
      "nearest_neighbor_taxon": "Cryptotermes havilandi (Tropical Drywood Termite RefSeq)",
      "organism": "Cryptocercus zagunaoensis voucher GHBG_1_1 (UNVERIFIED GenBank)",
      "pct_identity_vs_centroid": 75.9967,
      "query_coverage_pct": 97.6667,
      "raw_length_bp": 15454,
      "replacement_for_accession": null,
      "sector_code": "[C]",
      "sha256_prefix": "ae4ed4907fb3",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 1685.6328,
      "super_blast_e_value": 1e-180,
      "tip_code": "C:T011"
    },
    {
      "accession": "NC_056118.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Kalotermitidae Drywood Clade",
      "cleaned_sequence": "ATGTAGAGCCTGATTAAAGGATTACCGTGATAGGGTAAAACATGTAAGAAAACTACCTGCATTAATCAACATTTATATTTGACAGAATCAAACTGACACCACAAACATCAAAAATTCATGTGCACCATACACCAAAATATATTATAATAGAAAAGTAAGCTAAGGTAAGCTAATGGGTTCATACCCCATAGATAGAGTATAACTCTCTTCTCTAGTGCCCAACAACCCAACCAAAATCCTCTTATCAACAACTTTGATTGGAGGTATTTTAATTTCTATTTCATCCAATTCCTGGCTTGGTGCTTGGATAGGATTAGAAATTAATCTTATATCATTTATTCCACTTATGTCCTCACAAGAAAACATTTTCACTACAGAAGCCTCCCTAAAATATTTTATCATCCAAGCCCTCGCTTCATCAGTCTTACTATTTCTAGTAGTAATAGAAGTTTTAATTAACCAAAATCCCATGGTAGGAAAAGAAATCCATGAATATGTAATTATGACACCGTTGCTCATAAAAATAGGGGCGGCCCCAATACACTGATGATTCCCGAGAGTAATAGAAGGACTCAGATGAGAAAACTGCTTACTAATAATAACAGTTCAAAAAGCAGCTCCAATAATGTTAACCTCCTATTTGATAAAAGTTGACTACCTAATTTTAGCAGTTGTAATAATATCAGTGATGGTAGGGTCTGCCGGAGGTATAAATCAAACATCATTACGGAAAATCCTAACCTACTCATCAATCAACCATACTGGATGAATGCTAATAGCCTTAGCAGGAGGGAGCAATCTATGGATAATATACTTTGCAATATACTCATTACTAACCGCGGCGGTTATTATAACCACCAAAATATATAACATCTCCTTCATTAACCAAACAATGTCAATGAGTGGAAAAACCGCAACCAAATTCGTTCTATTCACAAATCTACTTTCCCTGGGCGGGCTCCCACCATTTATCGGATTCCTACCGAAATGAGCCGTCATCCAGACAATAATTACAAACAATCTAAGATCAGTAATGACAATAATGGTAATTACATCCCTAGCAACCTTGTACTACTATTTACGAATGTGCTATTCGAGATTCATCACCCTACATAGTGAAGTGAAGTGAGGACCTGTAGCATTTAAGGTAAATAAAACCACCACATATGGAGTTATTTTATCATCAGTGTCAATAATAGGATTAGTTGCATGCACCATAATCACCAACATCAATTAAAGGCTTTAAGTTAAAAAAACTAATAACCTTCAAAGCTATAAATAAAGAGGACTTCTTTAAGCCTTAGTGGCTACTCCACCCCTCCAGAATTGCATTCTGCTATCACAAAATGAATATAAGACTACATAGTAGAAGGGCAAATACCCCTTTATAGATTTACAATCTACCACTTATTAACCTCAGCCACTCTACTCATTATTAACCGTTGATTATTCTCAACCAATCATAAAGATATTGGAACTCTATACTTTATTTTTGGAGCATGATCAGGAATAGTCGGCACATCTCTAAGAATATTAATCCGTGCCGAGCTAGGGCAACCAGGATCCTTAATCGGAGACGATCAAATCTATAATGTAATTGTAACGGCTCACGCCTTTGTAATAATCTTCTTCATAGTAATACCAATCATAATTGGAGGATTCGGAAATTGGTTAGTACCTTTAATACTTGGCGCCCCAGATATAGCCTTCCCACGAATAAACAACATAAGATTCTGACTATTACCACCATCCTTAACACTACTCCTAACTAGAAGTATAGTAGAAAGAGGGGCAGGAACC",
      "detected_biotype": "DNA",
      "gc_percent": 33.9611,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 75.8342,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Cryptotermes havilandi (Tropical Drywood Termite RefSeq)",
      "pct_identity_vs_centroid": 75.8342,
      "query_coverage_pct": 98.0,
      "raw_length_bp": 15559,
      "replacement_for_accession": "PZ764336.1",
      "sector_code": "[C]",
      "sha256_prefix": "5e3e262f2c07",
      "source_origin": "ReserveReplacement",
      "strand_orientation": "+",
      "super_blast_bit_score": 1987.697,
      "super_blast_e_value": 1e-180,
      "tip_code": "C:T011"
    },
    {
      "accession": "NC_045866.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Kalotermitidae Drywood Clade",
      "cleaned_sequence": "ACTATAATTGAGTTCTATTCCAATAATTCTTATAGTATTAAGGCCCTTTTTTTAGGTTTTTTTCGACTAATTTTTGTCAAAAAAACACAAATTAACGGGAAACCCGTTTGAAGAAAATTCCAATGGGCTTTTATTATAATTACGTAATTTAACGAGGTTTTCCTTAAAAAAAAATAATTCTACCTACAAAAACTTCACCCAAATTCACAAAAATCAACACCAATTTCAATCATAAATAACAAGAAGAAACAGTAAAATGAGAAAAAAAATACACCAAAGTCAACAAAATCAAAGAAAGGCCCCCTCAACCCGGAACAACTAAAAAATACATAAAATACAAGAAAATGCAAAAAAAATGCAGAGCCTGAATTAAAGGATTACCGTGATAGGGTAAAACATGCGAAGCATATCGCCTGCATTAAACCAACTATACTTGACAGAATTAAACTGACACCAAAAACATCAAAAGTTTATGTGCACCATACACCAAAATATATTACAATAGAAAAGTAAGCTAAATAAGCTAATGGGTTCATACCCCATAGATAGAGTGTTCACTCTCTTCTCTAGTGCCCAACAACCCTACAAAAATCCTCCTATCAATAACCTTGATTGGAGGTATTTTGATTTCCATTTCATCCAATTCCTGGCTTGGTGCCTGGATAGGATTGGAAATCAATCTCATATCATTTATCCCTCTTATATCCTCACAAGATGACATCTTCACCACCGAAGCCTCCTTAAAGTACTTTATTATTCAAGCACTGGCCTCATCAGCCCTATTATTTTTGGTAGTAATAGAAACCCTGATTAGTCAAATCCCCATGGCAGAAAGAAATAACCACAGATACGTGATTATAACTCCACTGCTTCTAAAAATAGGAGCAGCCCCAATACACTGATGATTCCCTAGCGTGATAGAAGGGCTTAGATGAGAAAACTGTCTATTAATAATGACAGTCCAAAAAGCAGCACCAATAATATTAACCTCCTACCTAACAAGAATTAACTACCTAATCCTAACAATTGTGGTAATATCGGTGACGGTGGGGTCTATTGGAGGAATAAATCAAACATCATTACGGAAAATTTTAACTTACTCGTCGATTAACCACACTGGATGAATACTAATAGCCATAATTGGGGGTAGAAACTTATGAGCAATATATTTCATAGTGTATTCACTCCTAACGGCTGCAGTAACTGCAACTGCCAAGCAGTACAACATCTCATTTATTAACCAAACAATATCAGTGAACAGAAAAACAACAACTAAATTTATCCTATTCACAACCCTACTTTCATTGGGGGGACTACCCCCATTCGTCGGGTTCCTACCGAAATGAATTGTTATCCAAACAATAATCACAAATGACCTGAGAGCTGTCATAACAATAATGGTAATTATGTCGCTGGCAACTTTATACTACTACCTACGAATATGTTACTCAAGATTCATCACCCTACATGACGAGGTAAAATGAGGGCCCCAGGTATTCAAGATAAATAAAACCACTGCATACAGAGTCGTCTTATCATCGACGTCAATAATAGGTCTAATTGTGTGCACAATCCTCATCAACACCAACTAAAAGGCTTTAAGTTAAAAAAAACTAATAACCTTCAAAGCTATAAATAGAGAAGATTTCTTTAAGCCTTAGTGGTTTTCCCCACCCCTTTAGAATTGCATTCTACTATCACAGTAATGAATAAAAGACTTATAGTAGAGGGGTATAACACCCCTTTATAGATTTACAATCTAGCACTTAATATCTCAGCCACTCTACTTATTATTAACCG",
      "detected_biotype": "DNA",
      "gc_percent": 35.0682,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 74.144,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Cryptotermes declivis (Oriental Drywood Termite RefSeq)",
      "pct_identity_vs_centroid": 74.144,
      "query_coverage_pct": 87.3571,
      "raw_length_bp": 15678,
      "replacement_for_accession": null,
      "sector_code": "[C]",
      "sha256_prefix": "118e9f9b0c5f",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 1572.0205,
      "super_blast_e_value": 1e-180,
      "tip_code": "C:T012"
    },
    {
      "accession": "MK618724.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Kalotermitidae Drywood Clade",
      "cleaned_sequence": "ATGATCATTGATTTTCATGGAAATACTACTTATATTATTAGACCCTTTTTTTTTCGTTTTTTTAGACCGTTTTTGATCATTAAATCATGAATTAACGGGAAAGCCTTTTGAAGAAAATTTCAATGAGGTTTTATCATAATTACGCAAATTAGTGGGTTTTCATTCAAAAAAAATTCTATCCAGTTACAAAAAAAAGCTACACAAACCTATGAACCAACTACAAAACAAGCTTTAATACAGCAAAAATAAGAATTAAACATACTCAACCTCACCTTGACAAAACTGCACCAAAATAAAATAAATAAACAACAAAAGTTCCAACCCGGAAAACAAAAAAGTTACATTAAATACAAAAAATGTAGAGCCTGAATAAAGGATTACCGTGATAGGGTAAAATATGCAATAAACCTTGCCTACATTACAAATAACCAAAATTATATCCGACAGAATTAAACTGACACCAAAAACATCAAAAGTTCTCGTGCACCATACACCAAAATATATTAAAGTAGAAAAGTAAGCTAAAATAAGCTAATGGGTTCATACCCCATACATAGAGTATCAACTCTCTTCTCTAATGCCCAACAACCCAACAAAAATCCTTCTATCAATAACACTGGTAGGAGGTATTTTAATTTCCATTTCCTCAAACTCCTGGCTTGGTGCTTGGATAGGATTGGAAATTAATCTAATATCTTTCATTCCACTAATGACATCACAAGAAAACATTTTCACTACTGAAGCCTCACTAAAATATTTTGTCATTCAAGCTCTGGCCTCATCAGTCCTAATGTTTCTAGTGATAATAAAAGCCCTTATGTATCAAGGCTTTACAATAAGAAACAACATTTATGAATACGTAATCATAACTCCTCTTCTTACAAAAATAGGGGCTGCCCCAATACACTGATGATTCCCCAGAGTAATAGAAGGCCTTAGATGAGTAAATTGTCTCCTAATAATAACAATTCAAAGGGCAGCCCCAATAATCTTAATATCCTACCTAATAAAAATTAATCCATTAATCTTAACTGTCGTAATATTATCAGTAGTGGTAGGATCAATAGGAGGAATAAACCAAACATCATTACGAAAAATCTTAACATATTCATCAATCAACCATACAGGTTGAATATTAATAGCCCTACTAGGAGGAATTAACCTATGAGTAATATACTTCGCAGTATATTCAATACTAACATCGGCCGTAACCATTACAGCCAAATTATTTAACATTTCATTCATTAACCAAATAATGTCCACGAATGAAAAATCAGCAGTCAAATTTGTACTTTTCACTACCCTACTATCACTTGGAGGGCTACCTCCATTCATTGGATTCTTACCTAAGTGAATTACAATTCAAATAATAATTGCAAACAATTTAAGATTAACTATGACAGTAATAGTGATTACATCTCTAGCAACCCTTTACTACTATCTACGAATATGTTATTCAAGTTTTATCATCCTGCACAATGAAACAAAATGAAACCCTTTGATACACAAGGCAAATAAAACTTCCATGCACAGAATTGTTTTAGCATCAATATCAATAATAGGCCTAATTGTATGCACAATAATCGTCAGCATCAATTAACAAGGCTTTAAGTTAAAACAAACTAATAACCTTCAAAGCTATAAATAAAGAGTATCTCTTTAGGCCTTAGTGGTTAATCCACCCCTCTAGAATTGCATTCCAATATCACTAAAATGAATACAAGGCTAAAATAGTAGAGGGGTAATACCCCTTTATAGATTTACAATCTATCACTTATTAATCTCAGCCACTCTACTTAT",
      "detected_biotype": "DNA",
      "gc_percent": 31.4853,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 74.9214,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Cryptotermes brevis (Cosmopolitan West Indian Drywood Termite)",
      "pct_identity_vs_centroid": 74.9214,
      "query_coverage_pct": 87.3214,
      "raw_length_bp": 15674,
      "replacement_for_accession": null,
      "sector_code": "[C]",
      "sha256_prefix": "bec5509c2e43",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 1685.6328,
      "super_blast_e_value": 1e-180,
      "tip_code": "C:T013"
    },
    {
      "accession": "MT010558.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Kalotermitidae Drywood Clade",
      "cleaned_sequence": "AATGTAGAGCCTGACTAAAGGGTTACTGTGATAGGGTAAATCATGTAGAAAATCTACCTACATTAATCAACATTTATATTTGACAGAATCAAACTGACACCACAAACATCAAAAATTCGTGTGCACCATACACCAAAATATATTATAATAGAAAAGTAAGCTAAGGTAAGCTAATGGGTTCATACCCCATACATAGAGTATAACTCTCTTCTCTAGTGCCCAACAACCCAACTAAAATCCTCCTATCAACAACTTTGATTGGAGGTATTTTAATTTCTATCTCATCTAATTCCTGGCTTGGTGCCTGGATAGGATTAGAAATTAATCTAATGTCCTTTATTCCACTTATGTCCTCACAAGAAAATATCTTCACTACTGAAGCCTCCTTAAAATATTTTATCATCCAAGCACTCGCTTCATCAGTATTACTATTTCTAGTAGTAATAGAGGTTTTAATTAACCAAACCCCTATAATAGGGAAAGAAATCCATGAATATGCAATCATAACACCATTGCTCCTGAAAATAGGAGCAGCCCCAATGCACTGATGGTTCCCAAGTGTAATAGAAGGGCTCAGATGAGAAAACTGCTTACTAATAATAACAGTTCAAAGGGCTGCTCCTATGATGTTAATCTCCTATTTAATAAAAATTGACTATCTAATAATAACTGTTGTATTAATGTCAGTAATAGTGGGGTCTGCTGGAGGAATAAATCAAACATCGCTACGAAAGATTTTAACCTACTCATCGATTAACCACACAGGGTGGATACTAATAGCTTTGATGGGGGGAAGAAATCTATGAACAGTATACTTCACAGTATATTCATTCTTAACTGCAGCAGTAACTATAACAACCAAAATGTATAATATCTCATTCATTAACCAAACAATATCAGTAAACGGAAAAACTACAACCAAGTTTATTTTATTTACAAACCTACTCTCACTAGGTGGCCTACCGCCATTCATCGGATTCTTACCGAAATGAACTGTCATCCAAACAATAATTATAAACAACCTCAGATCAATCATAACAGTAATAGTGATTACATCCTTAGCAACTTTATATTACTATTTACGAATGTGTTACTCAAGATTTATCACCCTATATGACGAACCAAAATGAGGAACTACAACATTCAAGGTGAACAAAACTACCTCATACGGGGTTATTTTATCATCAGTATCAATAATAGGCCTAATTACGTGTACCATACTCACTAACGTCAATTAAAGGCTTTAAGTTAAAAAAACTAATAACCTTCAAAGCTATAAATAAAGAAGACTTCTTTAAGCCTTAGTGGTCGCCCCACCCCTTCAGAATTGCATTCTACTATCACGAATATGAATACAAGGCTATACATAGTAGAGGGGTAAATACCCCTTTATAGATTTACAATCTACCACTTATTAAACCTCAGCCACTCTACTCATTATTAACCGTTGATTATTCTCAACCAATCATAAGGACATTGGAACTTTATATTTTATTTTCGGAGCATGGTCAGGAATAGTTGGAACATCTCTTAGAATACTAATTCGAGCTGAGCTAGGGCAACCAGGATCTTTAATTGGAGATGATCAAATTTATAACGTAATCGTAACAGCTCATGCCTTTGTAATAATCTTCTTTATAGTAATACCAATTATAATTGGTGGGTTTGGTAATTGACTGGTACCTTTAATGCTTGGTGCCCCAGATATAGCCTTCCCACGAATAAACAACATAAGATTTTGATTACTACCACCATCGTTAACACTACTCCTAACTAGAAGTATAGTAGAAAGAGGAGCAG",
      "detected_biotype": "DNA",
      "gc_percent": 33.3631,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 75.3065,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Cryptotermes domesticus (Indo-Pacific Domestic Drywood Termite)",
      "pct_identity_vs_centroid": 75.3065,
      "query_coverage_pct": 98.3571,
      "raw_length_bp": 15655,
      "replacement_for_accession": null,
      "sector_code": "[C]",
      "sha256_prefix": "9efe9521e9e4",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 1922.7758,
      "super_blast_e_value": 1e-180,
      "tip_code": "C:T014"
    },
    {
      "accession": "NC_037511.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Kalotermitidae Drywood Clade",
      "cleaned_sequence": "ATGTAGAGCCTGATTAAAGGATTATCGTGATAGAGTAAAACATGTAAAAGAATTACCTACATTAACTCCAAAATTACATCTGACAGAATTAAACTGACACCAGTAAACATCAAAAGTTCACGTGCACCATACACCAAAATGTATTAAAATAGAAAAGTAAGCTAATACAAGCTAATGGGTTCATACCCCATATATAGAGTGTTCACTCTCTTCTCTAATGCCCAACAACCCAACAAAAGTCCTCCTGTCAACTACGTTGATCGGGGGTATTTTAATTTCCATTTCATCGAACTCCTGGCTTGGTGCCTGGATTGGATTGGAGATTAATCTCATATCATTCATCCCACTTATATCGTCACAAGAAAATATCATAACTACTGAAGCCTCACTAAAATACTTTATTATTCAAGCCCTAGCCTCATCAACGTTACTATTTCTGGTAGTGATAAAAACTTTTACCAGCCAAAGTATGTCAGCTGGGGGCAGTATTTACGAATATATAATCATGACCCCCCTTCTACTAAAAATAGGAGCAGCACCACTCCACTGGTGGTTCCCCAGAGTAATGGAAGGCCTAAGATGAGCAAATTGCTTATTGATAATAACCGTACAAAAAGCAGCACCACTCATGTTAATTTCCTACTTGTTGAAAACAACTCCATTAACGCTAATGGTCATCATAACATCAGTAATTGTGGGGTCCCTTGGGGGAATAAATCAAACATCACTTCGGAGGATCCTGACATATTCATCAATTAATCATACTGGGTGAATGCTTACAGCTATATTAGGAGGAACAAACTTATGAGCCATATACCTCACAGTATACTCTTTATTAACAGCAGCTGTAACCACTATCGCCAAAGCATTTAACATTTCATTTATCAATCAAGCGTTAACAATCAACAGAAAAGCATCTGTCAAAATTATGCTATTTTCGTCACTATTGTCACTAGGAGGTTTACCACCATTCATCGGATTTCTACCAAAATGAGCTGTAATCCAATCACTGATTGCAAACAACCTAGGATTTATTATGACACTAATGGTAGTTATATCACTAGTAACTTTGTATTTCTACTTACGAGTATGCTATTCAAGATTCATCATTCTTCACGAAGAAACGAAGTGGAACCCGTGACTACACAAGGAAAAAAGAATCTTTACATACAGAGTCATGTTCTCATCACTGTCTATAGTAGGGCTGACTGTATGCACAGCGATCATCAACATCAATTAAAGGCTTTAAGTTAAAAAAACTAATAACCTTCAAAGCTATAAATAAAGAACAAATCTTTAGGCCTTAATGGCAGTTTACCATCCCTGTAGAATTGCATTCTACTATCACAAAATGAATACAAGACCAACTTTAGTAGAGGGGTAAAACCCCTTAATAGACTTACAATCTACCACTTATCATCTCAGCCACTCTACTCATTGTAAACCGATGATTGTTTTCAACTAATCATAAAGATATTGGAACCTTGTATTTCATCTTCGGAGCCTGATCAGGAATGGTAGGAACATCATTAAGAATACTAATCCGAGCCGAACTAGGCCAACCAGGATCATTAATTGGTGATGATCAAATTTACAATGTGATCGTCACAGCCCACGCTTTCGTAATAATCTTCTTTATAGTAATACCAATCATGATTGGAGGGTTCGGAAACTGATTAGTACCACTAATACTAGGAGCCCCTGACATGGCCTTCCCACGAATAAATAACATGAGATTTTGATTATTACCCCCATCACTAACACTTCTTCTAACCAGAAGTATAGTAGAAAGTGGAGCAG",
      "detected_biotype": "DNA",
      "gc_percent": 34.5585,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 76.0831,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Incisitermes minor (Western Drywood Termite RefSeq)",
      "pct_identity_vs_centroid": 76.0831,
      "query_coverage_pct": 98.1786,
      "raw_length_bp": 15970,
      "replacement_for_accession": null,
      "sector_code": "[C]",
      "sha256_prefix": "1c43b7b3900b",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 1989.5004,
      "super_blast_e_value": 1e-180,
      "tip_code": "C:T015"
    },
    {
      "accession": "NC_046741.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Kalotermitidae Drywood Clade",
      "cleaned_sequence": "AATGTAGAGCCTGAATTAAAGGATTATCGTGATAGGGTAAAATATGTAAATCAATTACCTACATTACATTTGACAGAATTAAACTGACACCACAAACATCAAAAATTCATGTGCACCATACACCAAAATGTATTAAACTAGAAAAGTAAGCTAATATAAGCTAATGGGTTCATACCCCATACATAGAGTGAATACTCTCTTCTCTAATGCCCAACAACCCCACAAAAATCCTTCTATCAACAACATTGATTGGAGGTATTTTAATTTCCATTTCATCAAATTCATGGCTTGGTGCTTGGATAGGACTGGAAATTAATCTAATATCATTTATCCCACTTATATCATCTCAAGAAAACATCTACACTACTGAAGCATCACTAAAATATTTTATTATTCAAGCATTAGCCTCATCAACCCTAATATTTCTGGTGATAATAAAAGCTTTGTCTAGACAAAGCTTACCTTTAAGAAAGGAGGTGTACGAATATACCATTATAATTCCCTTACTATTAAAAATAGGAGCTGCACCACTGCACTGATGATTCCCAAGAGTTATAGAAGGATTAAGATGAACGAATTGCCTATTGATAATAACAGTACAAAAGGCTGCACCCATAATATTAATTTCCTATCTGACAAAAATTGACCTCTCAACATCAATAATTATTTTGGCATCAGTAATCGTAGGAGCCCTAGGAGGTATAAACCAAACATCACTACGAAAAATCTTAACATACTCATCTATTAATCACACTGGTTGAATATTAGCAGCTACTACAGGAGGAGATAACTTATGAGTTTTATACTTCACAGTATATTCCCTATTAACATCAACTGTAACTATAATTACCAAATCATTTAACATCTCATTTATTAACCAGGTAATAATATCCAATAGAAAATCATCAATTAAATTTATACTATTTACAACCCTTCTATCATTAGGGGGTTTACCTCCTTTCATTGGATTCCTCCCAAAATGGGTAGTAATTCAAATAATAATTACAAACAATCTAACAACATTCATAATGACAGTAATAGTAATTATATCACTAGCAACTTTATACTATTATCTACGAATATGTTACTCAAGATTTCTCATTCTACATGATGAAATAAAATGAGGATTCTGATCGCACCAAGAAAACAAGACAATTATATACAGAACCTTATTATCATCAATATCAATATTAGGATTAATTGTATGTACAATAATTATCAACATCAGATAGCAAGGCTTTAAGTTAAGTAAACTAATAACCTTCAAAGCTATAAATAAAGAAAATGTGTCTTTAAGCCTTAATGGCGATTTTATCACCACCCCAATAGAATTGCATTCTAATATCACAACATGAATATAAGACTTTTATAGTAGAAGGGTACTAAACCCCTTAATAGACTTACAATCTACCACTTAATATTCTCAGCCATTCTACTTATTGTAAAGCGATGATTGTTTTCAACAAACCATAAGGACATTGGAACTTTATATTTCATTTTTGGTGCTTGATCAGGAATAGTCGGAACATCATTAAGAATATTAATCCGGACAGAATTAGGTCAACCAGGATCACTAATTGGCGATGATCAAATCTACAACGTAATTGTAACAGCACATGCCTTTGTAATAATTTTCTTTATAGTAATACCAATTATAATTGGAGGATTCGGAAATTGACTAGTTCCACTAATACTAGGTGCACCAGATATAGCCTTCCCACGAATAAATAACATAAGATTTTGACTATTACCACCCTCATTAACACTTCTATTAACTAGAAGTATAGTAGAAAGAGGTGC",
      "detected_biotype": "DNA",
      "gc_percent": 31.7147,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 77.159,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Neotermes koshunensis (Ryukyu/Taiwan Damp-Drywood Termite)",
      "pct_identity_vs_centroid": 77.159,
      "query_coverage_pct": 98.4286,
      "raw_length_bp": 15589,
      "replacement_for_accession": null,
      "sector_code": "[C]",
      "sha256_prefix": "99737377a893",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2131.9665,
      "super_blast_e_value": 1e-180,
      "tip_code": "C:T016"
    },
    {
      "accession": "NC_018124.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Kalotermitidae Drywood Clade",
      "cleaned_sequence": "AGTGCAGAGCCTGAATAAAGGATCATCGTGATAGGATGAAACATGTAATTGACCATTTTACCTACACTAAAAATTATATCTGACAGAATTAAACTGACACCAAAAACATCAAAAATTCACGTGCACCATACACCAAGATATATTAAAGTAGAAAAGTAAGCTAAACATAAGCTAATGGGTTCATACCCCATACATAGAGTATTCACTCTCTTCTCTAATGCCCAACACCCCAACAAAATTCCTTCTATCAACAATGTTGGTAGGGGGTATTTTAGTTTCCATTTCTTCGAACTCCTGGCTTGGTGCCTGGATAGGACTGGAAATTAATCTCATATCATTTATCCCACTTATATCATCACAAGAAAACATCTTCACAACTGAAGCCTCATTAAAGTACTTTATTATTCAAGCCCTAGCATCATCCACCCTTCTATTTCTAGTAGTAATGAAAGCTCTAATTAGTCAGATCACTCCTACCGGAGTAGGTGTTTATGAGTACGTAATCATAATCCCCCTACTACTAAAAATAGGAGCTGCTCCACTACATTGATGATTCCCTAGAGTGATGGAAGGGCTCAGATGAATAAACTGTCTTCTAATAATAACAGTACAAAAAGCAGCACCCATAATACTTATTTCCTACTCAATAAAAATTAACCTCCTGACCTTAACAATTATTCTAACATCAGTAATTATTGGATCTTTAGGCGGAATAAACCAAACATCAATCCGAAAAATCTTAACATATTCATCAATTAATCATACTGGATGAATATTAACTTCCCTACTAAGAGGGAGAAATTTATGAACATTGTACTTCATAGTGTATTCACTGTTGACAGCAACTGTGACAACTATTGCTAAGTCATTCAATATCTCCTTCATTAATCAAACAATGTCAATTAGTACGGAAATTTCAACAAAATTTATCCTATTCACATCACTGTTATCACTTGGTGGACTTCCACCATTTATCGGATTCATACCAAGGTGAATTGTTATTCAAGCAATGGTCATAAATAGATTAACATTTATTGCAGTAACAATGGTAGTAATGTCACTAGTAACTCTATATTTCTACTTACGAATCTGCTATTCAAGATTCATTATCCTACATGAAAGATGTAAATGAAGAACGTGACTGCATAGGAAAAATAAAATTCTTGCATACAGAATCATCCTGTCATCAACATCAATAATGGGGTTAATTATATGCACAATAACCATCAACATCAATTAATAAAGGCTTTAAGTTAAAGAAACTAATAACCTTCAAAGCTATAAATAAAGAACACATCTTTAGGCCTTAATGGCAAATTTACCATCCCTACAAAATTGCATACTGTAATCACAAACATGAATATAAAGCCAACATAGTAGAGGGGTATAACCCCTTAATAGACTTACAATCTACCACCTACTTTAATCTCAGCCACTCTACTTATTGTAAACCGATGATTGTTTTCAACTAATCATAAGGACATTGGAACTTTATACTTCATCTTTGGAGCCTGATCAGGAATAGTAGGAACATCACTGAGAATACTAATCCGAGCTGAACTAGGTCAACCAGGGTCACTAATTGGTGATGATCAAATTTACAACGTAATTGTAACAGCACATGCCTTCGTAATAATCTTCTTTATAGTAATACCAATCATAATTGGTGGATTTGGAAATTGACTAGTACCATTAATATTAGGAGCCCCCGATATAGCATTCCCACGAATAAACAACATAAGATTCTGATTGCTACCCCCATCATTAACACTACTACTGACTAGAAGCATAGTAGAAAGA",
      "detected_biotype": "DNA",
      "gc_percent": 32.1666,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 76.809,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Neotermes insularis (Australian Ring-Antenned Ringbark Termite)",
      "pct_identity_vs_centroid": 76.809,
      "query_coverage_pct": 98.3214,
      "raw_length_bp": 15799,
      "replacement_for_accession": null,
      "sector_code": "[C]",
      "sha256_prefix": "b1fe79b995d0",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2103.1126,
      "super_blast_e_value": 1e-180,
      "tip_code": "C:T017"
    },
    {
      "accession": "NC_040119.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Kalotermitidae Drywood Clade",
      "cleaned_sequence": "AATGTAGAGCCTGATTAAAGGATTATCGTGATAGGATAAAATATGTAATTAACAATACCTACATTATCCAAAATATATCTGTTAGAATTAAACCAACACCAAAAACATCAAAAGTTCATGTGCACCATACACCAAAATATATCAAAGTAGAAAAGTAAGCTAAAATAAGCTAATGGGTTCATACCCCATATATAGAGTGGTAACTCTCTTCTCTAATGCCCAACACCCCAACAAAAATCCTCCTATCAATAACCTTGATAGGGGGTATTTTAATTTCCATTTCTGCAAACTCCTGGCTTGGTGCTTGGATAGGACTGGAAATTAATCTCATATCATTTATCCCGATAATATCATCACAAGAAAACATTTTCACTACAGAGGCCTCACTAAAATATTTCATCATTCAAGCTCTAGCATCATCTACCCTTCTATTTTTAGTGCTGATGAAAACATTAGTTAATCAAGGTCTGCCGATAAGTGAATATGTTCATGAGTATATAATTATAACCCCACTCCTATTAAAAATAGGAGCTGCCCCAATACATTGGTGATTCCCCAGTGTAATAGAAGGATTAAGATGAACGAACTGTTTATTGGTAATAACAGTACAAAAAATAGCACCCATAATACTAGCATCCTACTTAATAAAAAGAACTTTAGTAGTCTTAATCATAATTGGGATATCAGTAGTAGTGGGATCATTAGGAGGAATAAACCAAACATCAATTCGGAAAATTTTAACATACTCATCGATTAATCATACTGGATGAATATTAATAGCTCTTCTCGGAGGAAGAAGATTATGGATACTGTACTTCACAATCTACTCCCTACTAACAACAACCGTAACCACTATTGCAAAAATATACAACACATCTTTCATTAACCAATCACTAATAACCAAAGGAAACAAATCAGCTAAATACTTATTGTTTAGATCCTTATTATCACTTGGGGGACTACCTCCATTTATTGGATTCCTCCCAAAGTGAGCGGTAATTCAAACAATAATCACAAACAAAATGAGATTTATGATAACAATAATAGTAATCATGTCCCTCGCAACCCTGTACTTCTATCTCCGAATATGTTACTCGAGATTCATAATTCTTCACAACGAGACGAAATGAATTATCTGACCACACAAAGAAGAAAAAAGCCTTATGTACAGAATCATCCTGGCATCAGTGTCCCTACTTGGATTAATTGCATGTACAATAATCACCAACATCAATTAATCAAGGCTTTAAGTTAAAAAAACTGATAACCTTCAAAGCTATAAATAAAGAAATTATCTTTAAGCCTTAATGGCCGTCTAATAACCATCCCACCAGAATTGCATTCTATTATCACAAACATGAATATAAGACTACATAGTAGAGGGGTAAACCCCTTAATAGACTTACAATCTACCACCTATCAATCTCAGCCACTCTACTTATTGTAAACCGATGGCTGTTCTCAACCAACCATAAGGACATTGGAACCCTATACTTCATCTTCGGAGCCTGATCAGGAATAGTCGGAACATCACTGAGCATGTTAATTCGTGCCGAACTTGGCCAACCAGGATCATTAATTGGAGACGATCAAATCTACAATGTAATCGTAACAGCACATGCCTTTGTAATAATCTTCTTCATAGTAATACCAATCATAATTGGGGGGTTTGGAAATTGATTAGTACCATTAATATTGGGAGCCCCTGACATAGCTTTCCCTCGTATAAACAATATGAGATTCTGACTTCTACCTCCTTCATTAACACTACTACTAACCAGAAGCATGGTAGAGAGCGGA",
      "detected_biotype": "DNA",
      "gc_percent": 33.2078,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 74.8242,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Roisinitermes ebogoensis (Afrotropical Canopy Drywood Termite)",
      "pct_identity_vs_centroid": 74.8242,
      "query_coverage_pct": 98.5,
      "raw_length_bp": 15933,
      "replacement_for_accession": null,
      "sector_code": "[C]",
      "sha256_prefix": "b469270a0c5c",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 1854.2477,
      "super_blast_e_value": 1e-180,
      "tip_code": "C:T018"
    },
    {
      "accession": "OQ998965.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "RESCUED_REVCOMP",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Kalotermitidae Drywood Clade",
      "cleaned_sequence": "TCATCATTGAATTATGGTTAAGATCATGATTAATCTGCCTGTTAATAGGAGTTCTTGATTATATTGGTGGAATCACTTAATTATTCCTGATATTGTTACTAGGGCTCCAATTGCTCCCGTTAGTGGTCAAGGTCTTTGTTCTACTAGGTGAAATGGGTGATTGTTTTGTCTTGTCATTAAGTTACTTCTCTAGAATATAAGGTTCTCAATACTGCAAATACGTAGGATTGGATTACGGCTACTGCTGATTCTAGGATTAGTAGGAGGATTTGGGCTGTAATTAGAATTCCTAATAATGAGTGTCTAATGGTTGGTCCATTATTTCCTAACAAGGTTAATAGAAGATGTCCTGCAATTATGTTTGCAGTTAGTCGTACTGCCAGAGTCCCTGGTCGGATAATATTTCTGATTGTTTCGATGCATACTATAAAGGGTATAAGTGCTGCTGGAGTTCCCTGAGGCACTAAGTGTTCGAATATGTGGTTTATGTTGTTGATTCATCCAAATATTATGAATCTTAATCATAGGGGCAGTGCAAGGGTCAGTGTTATTGTTAAGTGACTTGTTCTTGTGAAGATGTATGGGAATAATCCTAGGAAATTGTTGAATAGAATTAGCGAGAATAGTGAGATGAAGATGAAAGTTCTTCCTTTTACCTTATCTCTTAAAAGTGTTTTGAACTCATTGTGTAGTCTTATTAATAGCCTATTTCATGCTATTGTGTGCCGGGACGGAATTAGCCATACTCTTATAGGAATGAGGAGAATACCTATAAGTGTTCTGGTTCAATTAATTGATATGTTTATAATTCTTGTTGATGGGTCAAATACTGAGAATAGGTTACTTATCATTTTCAGACTATGGTTTTTTGTCTAACTTCAATTTTTTTTTTGATTCTTGTTTTTGGGATATATGAGTAGTAGTTTGTTGAGGCAAATAGTATTAGTGCTATTGAGAATAGAATAAATAGGGTTAATCATCTTAGAGGTATTATTTGAGGTATCAAGGAATGCCGAGACGTTTTGGCAATTTTAGTTTGACATTCTAATGTTATTTTTAACTAATTCCTTTCATCAGAAGTATTTGCTAATTTACTATGATGTGGTTTAAGAGACCAATACTTGCTTTCAGTCATCTGATGATTCTCTTAGGTTTGAAATTCAGTTAATGAATGTGTTGGTTGATACTCTTTCGATTACAATTGGTATAAATCTGTGATTTGCCCCGCAGATTTCTGAGCATTGTCCATAGAATAGACCAGGTCGATTAATTAAGAATCTACATTGGTTTAATCGGCCAGGTGTTGCGTCTGTTTTAACTCCTAGTCTTGGGATTGTTCATGAGTGTAGGACATCAGCTGCTGTTACAATAATTCGGATGAATGAATTTATTGGTAGAGTTGTGTGGTTATCTGTATCTAACAGGCGAAATATATCTTTTTCTTGTCTATCTTGTGGGGTTATGTATGCATCAAATTCTACTTTTGTGAAGTCGGAATATTCATATCTTCAATACCACTGATGTCCAATTGCTTTTAATGTAAGTGTTGGTCTGTGGATTTCGTCTATTAGATATAGGAGTCGTAGTGATGGGATTGCAATGAATATTAGAATTACTGCTGGGGCAAGGGTTCAAGCAACTTCAATTATTTGACCTTCTAGTATGAATCGGTTTGTGTATTTATTAAATGTGAGTGTAATTATTATGTATGCTACTACTGTAATAATTATTAGGAGAATTATTAGTGCATGGTCATGGAATGAGATTAATTGTTCTATAATGGGAGAGGCTCTATCTTGT",
      "detected_biotype": "DNA",
      "gc_percent": 33.771,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 85.994,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Glyptotermes sp. isolate H2.1 (Canopy Branch Drywood Termite)",
      "pct_identity_vs_centroid": 85.994,
      "query_coverage_pct": 23.7143,
      "raw_length_bp": 15691,
      "replacement_for_accession": null,
      "sector_code": "[C]",
      "sha256_prefix": "0b61bb59cdd8",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "-",
      "super_blast_bit_score": 779.4399,
      "super_blast_e_value": 1e-180,
      "tip_code": "C:T019"
    },
    {
      "accession": "OQ998961.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "RESCUED_REVCOMP",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Kalotermitidae Drywood Clade",
      "cleaned_sequence": "CTACTTGAAAGAAAATAAAATAGTACGGATCCAAAACCCCCTTTAACAAACAAATTAACCAGACAAAAAAATAACCCTTACCCCAACCAATTCTCGAACCAGCCTGAGCCTACTATTACTCTAGATCTCTTTTTTTTTTTGGTTGATCAAAAAAGAGATCTAGAGTAAAGGTAATATTATTAAAATAAAAGAAGACATTATACAATAAGGGTATATTCTATTAGAAGCAATTATTTAAGAGTAATTGATGTTCTTTATATAATATATTAAATCCTAATATAAACGTCTAATTATCCTACATTAAATATGGTTTAATTTATTAAAGATAAAGTCTTATATATGTATCTTCTCTATTTTCCCATATAGGTAGCTATACCCACTATAATTGTTCTTTATTCTAGAAAGACTTATTATAAAACGCCCTTTTTTTTCGGTTTTTTTGAACCAAAAATCATTAAAAATACGCAATTTAACGAGATTTTCCTTTGAAGAAAATTTAAATCAGAAATCATTAAAAATACGCAATTTAACGAGATTTTCCTTTGAAGAAAATTCTCAAACATCAAAGACCAAAAAACTACACAACTTAAAACAAAAACAAGTTCAATAAACGTGATATAACACTAACAACAAATCAACTACCAGAAAATATAAAAAATACATAAAATACACAAAATAAAAAAAAAAATGTGGAGCCTGATTAAAGGATTATCGTGATAGGATAAAACATGTGAATTATTATTACCCACATTATTAAGCAATTATTATATTTGACAGAATTAAACTGACTCCTAAAACATCAAAAGTTCATGTGCACCATACACCAAAATATATTAAAATAGAAAAGTAAGCTAAATAAGCTAATGGGTTCATACCCCATACATAGAGTAAATACTCTCTTCTCTAATGCCCAACAACCCTACAAAAATCCTCCTTTCAATAACATTGATTGGAGGTATTTTAATTTCTATTTCCTCAAATTCATGGCTTGGTGCTTGAATAGGATTAGAAATTAATCTATTATCATTTATTCCACTTATATCCTCACAAGAAAATATTTATTCTACTGAAGCTTCACTTAAATATTTTATTATTCAGGCCCTAGCTTCGTCTACATTACTATTCTTAGTGATAATAAAAGCCTTAGCTAATCAAGTAATAATTATAGGAGAAGAGATTTATTCATATTTAATTATGATTCCTTTATTGCTAAAAATAGGAGCTGCCCCTCTACACTGATGATTTCCGAGAGTAATAGAAGGATTAAGTTGAATAAATTGTTTATTAACAATGACAATCCAAAAAATTGCCCCTATAATATTAACTTCATACTTAATTAAAGTTAACGTATTAACATTTTCAATTATCTTGATGTCAGTAATTATTGGATCCTTAGGTGGCTTAAATCAAACATCATTACGGAAAATTCTAACTTATTCTTCAATTAATCATACTGGTTGGATATTAACCGCAATATTAGGAGGGAATAACTTATGAGTTTTATATTTTAGTGTATATTCACTTTTAGTTTTTACTATAGTAACCATTACCAACATATTCAACATTTCATTTATCAATCAGACATTAACTGGGAAGAGAAGAATAGCAATCAAATTTATAATATTTACAACCCTTTTATCACTAGGTGGACTTCCACCATTTATTGGATTTTTACCAAAGTGAATTGTAATTCAAATAATAATTATAAACAAAATAAGATTTATTATAACAACTATAGTATTAGCATCACTCATAACGCTGTACTATTATTTACGAGTTTGTTATTCAAGATTCATTATT",
      "detected_biotype": "DNA",
      "gc_percent": 28.5281,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 72.1154,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Rugitermes sp. A JA-2024a (Neotropical Drywood Termite)",
      "pct_identity_vs_centroid": 72.1154,
      "query_coverage_pct": 75.5,
      "raw_length_bp": 15497,
      "replacement_for_accession": null,
      "sector_code": "[C]",
      "sha256_prefix": "32835d516369",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "-",
      "super_blast_bit_score": 1145.5238,
      "super_blast_e_value": 1e-180,
      "tip_code": "C:T020"
    },
    {
      "accession": "PV077931.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "QUARANTINED_NUMT",
      "chimera_5p_3p_delta_pct": 1.8,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "",
      "detected_biotype": "DNA",
      "gc_percent": 36.3196,
      "included_in_cleaned_cohort": false,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 2,
      "locus": "Mitochondrial Genome (UNVERIFIED)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 90.3038,
      "nearest_neighbor_taxon": "Coptotermes formosanus (Formosan Subterranean Termite RefSeq)",
      "organism": "Coptotermes testaceus isolate 1580 (UNVERIFIED GenBank)",
      "pct_identity_vs_centroid": 90.3038,
      "query_coverage_pct": 99.4167,
      "raw_length_bp": 16303,
      "replacement_for_accession": null,
      "sector_code": "[D]",
      "sha256_prefix": "fdf0e14ff83b",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 3280.7125,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T021"
    },
    {
      "accession": "NC_015800.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "AATGATGAGCCTGATTAAAGGACTATCGTGATAGGATAAAACATGTAGCACAAACTACCTTCATTACATCCGACAGAATTAAACTGTCACCACCAAGCATCAAAAGCCACCGTGCACCATACACCAAGATGTATAGAAAATAAAAACTCAACTTAGAAAAGTAAGCTAAGCCAAAGCTAATGGGTTCATACCCCATAAATAGAGTTACACACTCTCTTCTCTAATGCCCAGTAACTCAACCAAAATCCTATTACTAATCACCTTAGTAAGAGGTATGTTAGTGTCTGTATCGTCCAACTCATGAATTGGCGCATGAATAGGTCTGGAAGTAAATTTAATATCATTTATTCCACTGATATCTAACATCAAAAACATATACAACACAGAAGCATCACTAAAATACTTTATCGTTCAAGTATTAGCTTCAGCAACTCTGCTATTCATAGTAGTAATAAAAACAGTAACGGAAGATCTGTTCACATTCACGAACGTAGGAACCCCATACACGCCAATAATTGTCTGCACACCTCTACTCTTAAAAAGAGGAGCAGCGCCATTTCACTGGTGGTTCCCAGGAGTCATAGAAGGACTAAGATGAGAAAATTGCGGCCTACTAATAACCATCCAAAAGGCCGCACCCATGATATTAATATCATACCTGATTGAAATCAACCCCTTTATGTTAATAATTATCCTAGCATCAACAATCGTGGGAGCAATTGGAGGCCTCAACCAAACATCAATACGAAAAATCCTAACGTACTCATCTATCAACCACACCGGTTGAATACTAATAGCAATAATTACAGGAGACAACATATGAACAATATACTTCGTAATTTACTCCACACTGGTTCTAACAGTGCTATCAGTTATTAAGCTATCCAGAGTATCATTCATCAACCAAACCATAATAACAAACAAGGAAGCCAAATTAATGAAATTCATAATATTTACATCACTACTCTCCCTAGGGGGGCTCCCTCCATTCCTAGGATTTTTACCAAAATGATTTATCATTCAAGCAATAACTATAAACAAACTAATACCCATAGCAACTATGATAGTAATCATATCACTAATCACACTATATTACTACCTAAAAATCTCCTATTCAAGATTTATAATCCTAAACACAGAACCAAAATGAAATAGCCAGTCACACAAAAACAGGACAACCAAAAACGTAAGAGCGATAATCCTATCATCAATCTCACTAACAGGAGCAGTGCTATGCACAATCATCATTGGAACAAACTAAAAATAAAGGCCTTAAGTTAAACTAAACTAATAACCTTCAAAGCTATAAATAAGGGGCTCACCTTTAGGCCTTGGTAAGCCTTATACCTACCCCTACAGAATTGCATTCTGTCATCACTAAATGAATACAAGGCTAAAGCCACAATAGTGGAAGAGCAACGTCAACGCCCCTAAATAGATTTACAGCCTATCGCCTACTAATTTGTCTCAGCCATCCCACTAATTTTTAACCGATGATTCTTCTCAACTAACCACAAGGATATTGGAACATTATACTTCGTATTTGGTGCATGATCAGGTATAGTAGGAACATCCCTTAGAATACTTATCCGAACAGAGTTAGGGCAACCAGGATCTTTAATTGGAGACGACCAAATTTACAACGTCATTGTTACAGCCCACGCATTTGTTATAATCTTCTTCATAGTCATGCCTATCCTAATTGGAGGATTCGGAAACTGACTAGTACCCCTAATGCTTGGGGCACCAGATATGGCATTCCCACGAATAAACAACATGAGATTCTGACTACTCCCACCA",
      "detected_biotype": "DNA",
      "gc_percent": 34.1419,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 100.0,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Coptotermes formosanus (Formosan Subterranean Termite RefSeq)",
      "pct_identity_vs_centroid": 100.0,
      "query_coverage_pct": 100.0,
      "raw_length_bp": 16326,
      "replacement_for_accession": "PV077931.1",
      "sector_code": "[D]",
      "sha256_prefix": "1f4bf79af9e5",
      "source_origin": "ReserveReplacement",
      "strand_orientation": "+",
      "super_blast_bit_score": 5050.7189,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T021"
    },
    {
      "accession": "NC_030014.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "AATGATGAGCCTGATTAAAGGACTATCGTGATAGGATAAAACATGTAGAACAAACTACCTTCATTACATCTAACAGAATTAAACTGTCACCACCAAGCATCAAAAGCCAACGTGCACCATACACCAAGATGTATAAAACACAAACTCAACATAGAAAAGTAAGCTAAGATAAAGCTAATGGGTTCATACCCCATAAATAGAGTACACACTCTCTTCTCTAATGCCCAGTAACTCAACCAAAATCCTATTACTAATCACTTTAGTAAGAGGTATGTTAGTGTCTGTATCGTCCAACTCATGAATTGGCGCATGAATAGGTCTGGAAGTAAATTTAATATCATTTATTCCACTGATATCTAACATCAAAAACATATACAACACAGAAGCATCACTAAAATACTTTATCGTTCAAGTATTAGCTTCAGCAACTCTACTATTCATAGTAGTAATAAAAACAGTAACAGAAGACTTATTTACGCTTACGAACGTAGGAACCCCATACACGCCAATAATTGTCTGCACACCCTTACTTTTAAAAAGAGGAGCAGCACCATTTCACTGGTGGTTCCCAGGAGTCATAGAAGGACTGAGATGAGAAAACTGCGGCCTACTAATAACTATTCAAAAGGCCGCACCCATGATACTAATATCATACCTGATCGAAACTAGCCCCTTCATGCTAAGAATCATCTTAGCATCAACAATCGTAGGGGCAATTGGAGGTCTCAACCAAACATCAATACGAAAAATCTTGACATACTCATCCATCAACCACACAGGCTGGATACTAATAGCACTAATCACAGGAGATAACATATGAATAGTATACTTCACAGTATACTCAGCACTAGTGTTAACAGTACTGTCAGTTATTAAACTATCCAGAGTATCATTCATCAATCAAACTATGATAACAAATAGGGAAACCAAATTAATGAAATTCATGATATTCACATCACTACTCTCCCTGGGGGGACTTCCACCATTCCTAGGATTTCTACCAAAATGACTTATTATCCAAGCAATAACCATAAATGAATTAATACCCGTAGCAACCATAATAGTAATTGCATCACTAATCACACTATACTACTACTTAAAAATCTCCTATTCAAGATTCATGATCTTAACTACAGAGCCAAAATGAAACAACCAATCACACAAAAACAAAACAACCAAAAATACCAGAGCCATAGTCCTATCATCAATTTCACTAACAGGAGCAATACTATGCACAATCATTATCAGAACAAACTAATAACGGAAGGCCTTAAGTTAATCTAAACTAATAACCTTCAAAGCTATAAATAAGGGGCTCACCTTTAGGCCTTGGTAAGCCTCAAACCTACCCCTACAGAATTGCATTCTGTCATCACTAAATGAATACAAGGCTAAAACTACAATAGTGGAAGAGCAACGTCAATGCCCCTAAATAGATTTACAGCCTATCACCTACTAATTTATCTCAGCCATCCCACTAATTTTTAACCGATGATTTTTCTCAACTAACCACAAGGACATTGGAACATTATACTTCGTATTTGGAGCATGATCAGGTATGGTAGGAACATCCCTCAGAATACTTATCCGAACAGAGCTAGGGCAACCAGGATCTCTAATCGGAGACGACCAAATTTACAACGTTATCGTCACCGCCCACGCATTCGTTATAATCTTCTTCATGGTCATACCAATCCTAATTGGAGGTTTCGGGAACTGATTAGTGCCTCTAATACTCGGAGCCCCAGACATAGCATTCCCACGAATAAATAACATAAGATTCTGACTACTCCCACCATC",
      "detected_biotype": "DNA",
      "gc_percent": 36.0614,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 91.5448,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Coptotermes gestroi (Asian Invasive Subterranean Termite)",
      "pct_identity_vs_centroid": 91.5448,
      "query_coverage_pct": 99.9286,
      "raw_length_bp": 14919,
      "replacement_for_accession": null,
      "sector_code": "[D]",
      "sha256_prefix": "1cacb5b5543a",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 3981.3212,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T022"
    },
    {
      "accession": "NC_018125.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "GATGAGCCTGATTAAAGGACTATCGTGATAGGATAAAACATGTAGCAAAAACTACCTTCATTATTACATCCGACAGAATTAAACTGTCACCAACAAGCATCAAAAGCCACCGTGCACCATACACCAAGATGTATGAATATAAAAACTCAACATAGAAAAGTAAGCTAAGACAAAGCTAATGGGTTCATACCCCATAAATAGAGTTCACACTCTCTTCTCTAATGCCCAGTAACTCAACCAAAATCCTATTACTAATCACCTTAGTAAGAGGTATGTTAGTGTCTGTATCGTCTAATTCATGAATTGGCGCATGAATAGGTCTGGAAGTAAATTTAATATCATTTATTCCACTGATATCTAACATCAAAAACATATACAACACAGAAGCATCACTAAAATACTTTATCGTTCAAGTATTAGCTTCAGCAACTCTACTATTCATAGTAGTAATAAAAACAGTAACAGAAGACTTATTCACACTCACGAACGTAGGGACCCCATACACGCCAATAATTGTCTGCACACCTCTACTTTTAAAAAGAGGGGCAGCACCATTTCACTGGTGGTTCCCAGGAGTCATGGAAGGATTAAGATGAGAAAACTGTGGCCTACTAATAACCATTCAAAGGGCCGCACCCATGATACTAATTTCATACCTGATTGAAATCAATTCTTTCATGTTAAGAATTATTCTAGCATCAACAATCGTAGGAGCAATTGGGGGTCTTAATCAAACATCAATGCGAAAAATCCTAACATACTCATCCATCAATCATACCGGTTGAATACTCATAGCACTAATTACAGGGGACAATATATGGATAATATACTTTGCAACCTACTCAACGCTAGTACTAACAGTATTATCAGTCATCAAACTATCCAGAGTGTCATTCATCAACCAAACCATAATAACAAATAGAGAAACCAAATTAATGAAATTCATAATATTCACATCATTACTCTCCTTAGGCGGACTCCCACCATTCCTAGGATTCCTACCAAAATGATTTATCATCCAAGCAATAACCATAAATAACCTAATACCCATAGCAACCATAATAGTAATCGCATCACTAATCACACTATACTACTACTTAAAAATCTCCTACTCAAGATTCATAATCCTAACCACAGAACCAAAATGAAATAGTCAATCACACAAAAACAAAACAGCCAAAAACATCAGAGCCATAGTACTGTCATCAATCTCACTAACAGGAGCAACACTATGCACAATCATCATCGGAACAAACTAAGAACAGAAGGCCTTAAGTTAAACTAAACTAATAACCTTCAAAGCTATAAATAAGGGGCTCACCTTTAGGCCTTGGTAAGCCTTATACTTACCCCTACAGAATTGCATTCTGTCATCACTAAATGAATACAAGGCTAAAACACAATAGTGGAAGAGCAACGTCAACGCCCCTAAATAGATTTACAGCCTATCGCCTACTAATTTATCTCAGCCACCCCACTAATCTTTAACCGATGATTTTTCTCAACTAACCACAAGGACATTGGAACACTATACTTCGTATTTGGCGCATGATCAGGCATAGTAGGAACATCCCTCAGAATACTTATCCGAACAGAGCTAGGGCAACCTGGATCTTTAATCGGAGACGACCAAATTTACAACGTCATTGTTACAGCCCATGCATTCGTTATAATTTTCTTCATGGTTATACCAATCCTAATTGGAGGTTTCGGAAACTGACTAGTACCCCTAATACTCGGAGCACCAGATATGGCATTCCCACGAATAAACAACATAAGATTTTGACTACTCCCACCATC",
      "detected_biotype": "DNA",
      "gc_percent": 35.5997,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 92.533,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Coptotermes lacteus (Australian Mound-Building Coptotermes)",
      "pct_identity_vs_centroid": 92.533,
      "query_coverage_pct": 99.8571,
      "raw_length_bp": 16326,
      "replacement_for_accession": null,
      "sector_code": "[D]",
      "sha256_prefix": "c5c247f469ab",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 4099.4419,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T023"
    },
    {
      "accession": "NC_028722.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "TGATGAGCCTGATTAAAGGACTATCGTGATAGGATAAAACATGTAGTAAACACGCTACCTTCATTACATCCGACAGAATTAAACTATCACCACCAAGCATCAAAAGCCATCGTGCACCATACACCAAGATGTATAAACATAAAACTCAACATAGAAAAGTAAGCTAAGATAAAGCTAATGGGTTCATACCCCATAAATAGAGTACACACTCTCTTCTCTAATGCCCAGTAACTCAACCAAAATCCTATTACTAATCACCTTAGTAAGAGGTATGTTAGTGTCTGTATCGTCCAACTCATGAATTGGCGCATGAATAGGACTGGAAGTAAATTTAATATCATTTATTCCACTGATATCTAACATCAAAAACATATACAACACGGAAGCATCACTAAAATACTTTATCGTTCAAGTATTAGCTTCAGCAACCCTACTATTCATAGTAGTAATAAAAACAGTCACAGAAGACCTATTCACACTTACGAACGTAGGAACCCCATACACGCCAATAATTGTCTGCACACCTCTACTTTTAAAAAGAGGAGCAGCACCATTCCACTGGTGGTTCCCAGGAGTCATAGAAGGACTGAGATGAGAAAACTGCGGCCTACTGATAACCATTCAAAGGGCCGCACCCATGATACTAATATCATATCTAATTGAAGCCAACCCATTCATACTAAGAATTATCCTAGCATCAACAGTCGTAGGAGCGATCGGAGGTCTCAACCAAACATCAATACGAAAGATCCTAACATACTCGTCCATCAACCACACCGGTTGAATACTAATAGCACTAATTACAGGAGACAACATGTGAGTAATATACTTCATAACCTACTCAGTACTAGTACTAACAGTCCTATCAGTTATTAAGCTATCCAGAATATCATTCATCAACCAAACCATGATAGCAAACAGAGAGGCCAAACTAATGAAATTCATAATATTCACATCACTACTCTCCTTAGGAGGACTGCCGCCGTTCCTAGGATTCTTACCGAAATGGTTTATCATTCAAGCAATAACTATAAACAAGCTAATGCCCATAGCAACTATAATGGTAATTACATCGCTAATTACACTATACTACTACCTAAAAATCACCTACTCAAGATTCATAATCCTAGCCACAGAGCCGAAATGAAGTAGCCAATCACACAAAAACAAAACAACTAAAAACATCAGAGCCATAATCTTATCATCAATCTCACTGACAGGAGCAACACTATGCACAATCATCGCTAGAACAAACTAAAACAGAAGGCCTTAAGTTAAATTAAACTAATAACCTTCAAAGCTATAAATAAGGGGGATCACCTTTAGGCCTTGGTAAGCCTATAACTTACCCCTACAGAATTGCATTCTGTCATCACAAAATGAATACAAGGCTAACATCATAATAGTGGAAGAGCAACGTCAACGCCCCTAAATAGATTTACAGCCTATCGCCTACTAATCTTTCTCAGCCACCCCACTAATCTTTACCCGATGATTTTTCTCAACTAACCACAAGGACATTGGAACACTATACTTCGTATTTGGTGCATGATCAGGTATGGTAGGAACATCCCTCAGAATGCTTATCCGAACAGAGCTAGGACAGCCCGGATCTTTAATCGGAGACGATCAAATCTACAACGTTATTGTCACAGCCCACGCATTTGTCATAATCTTCTTCATGGTTATGCCAATTTTAATCGGGGGATTCGGGAACTGATTAGTACCCCTAATACTCGGAGCACCAGACATGGCATTCCCACGAATAAATAACATAAGATTTTGACTACTCCCACCATC",
      "detected_biotype": "DNA",
      "gc_percent": 36.5858,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 91.1071,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Coptotermes testaceus (Neotropical Rain-Forest Coptotermes)",
      "pct_identity_vs_centroid": 91.1071,
      "query_coverage_pct": 99.8571,
      "raw_length_bp": 15752,
      "replacement_for_accession": null,
      "sector_code": "[D]",
      "sha256_prefix": "156f96d0eb3b",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 3916.4,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T024"
    },
    {
      "accession": "NC_030015.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "AATGATGAGCCTGATTAAAGGACTATCGTGATAGGATAAAACATGTAGAACAAACTACCTTCATTACATCTAACAGAATTAAACTGTCACCACCAAGCATCAAAAGCCAACGTGCACCATACACCAAGATGTATAAAACACAAATTCAACATAGAAAAGTAAGCTAAGATAAAGCTAATGGGTTCATACCCCATAAATAGAGTACACACTCTCTTCTCTAATGCCCAGTAACTCAACCAAAATCCTATTACTAATCACTTTAGTAAGAGGTATGTTAGTGTCTGTATCGTCCAACTCATGAATTGGCGCATGAATAGGTCTGGAAGTAAATTTAATATCATTTATTCCACTGATATCTAACATCAAAAACATATACAACACAGAAGCATCACTAAAATACTTTATCGTTCAAGTATTAGCTTCAGCAACTCTACTATTCATAGTAGTAATAAAAACAGTAACAGAAGACTTATTTACGCTTACGAACGTAGGAACCCCATACACGCCAATAATTGTCTGCACACCCTTACTTTTAAAAAGAGGAGCAGCACCATTTCACTGGTGGTTCCCAGGAGTCATAGAAGGACTGAGATGAGAAAACTGCGGCCTACTAATAACCATTCAGAGGGCCGCACCCATGATACTAATATCATACCTGATCGAAACTAGCCCCTTCATGCTAAGAATCATCTTAGCATCAACAATCGTAGGGGCAATCGGAGGTCTCAACCAAACATCAATACGAAAAATCTTGACGTACTCATCCATCAACCACACAGGTTGAATACTAATAGCACTAATCACAGGAGATAACATATGAGTAATATACTTCACAATCTACTCAGCACTAGTGCTAACAGTACTGTCAGTTATTAAACTATCCAGAGTATCATTCATCAACCAAACCATAATAACAAACAGGGAAACCAAATTAATGAAATTCATGATATTCACATCACTACTCTCCCTGGGAGGACTTCCACCATTCCTAGGATTCCTACCAAAATGACTTATCATTCAAGCAATAACCATAAATGAACTAATACCCGTAGCAACCATAATAGTAATTGCATCACTAATCACACTATACTATTACTTAAAAATCTCCTATTCAAGATTCATGATCTTAACCACAGAGCCAAAATGAAACAACCAATCACACAAAAACGAAACAACCAAAAATATCAGAGCCATACTCCTATCATCGATCTCACTAACAGGGGCAATGCTATGCACAATCATTATCAGAACAAACTAACAACGGAAGGCCTTAAGTTAATTTAAACTAATAACCTTCAAAGCTATAAATAAGGGGCTCACCTTTAGGCCTTGGTAAGCCTTAAACCTACCCCTACAGAATTGCATTCTGTCATCACTAAATGAATACAAGGCTAAAACTACAATAGTGGAAGAGCAACGTCAATGCCCCTAAATAGATTTACAGCCTATCACCTACTAATTTATCTCAGTCATCCCACTAATTTTTAACCGATGATTTTTCTCAACTAACCACAAGGACATTGGAACACTATACTTCGTATTTGGAGCATGATCAGGTATGGTAGGAACATCCCTCAGAATACTTATCCGAACAGAGCTGGGGCAACCAGGATCCCTAATCGGAGACGACCAAATCTACAACGTTATTGTCACCGCCCACGCATTTGTTATAATCTTCTTCATGGTCATACCAATCCTAATTGGGGGTTTCGGGAACTGATTAGTGCCCCTAATACTTGGAGCACCAGACATAGCATTCCCACGAATAAACAACATAAGATTCTGACTACTCCCACCATC",
      "detected_biotype": "DNA",
      "gc_percent": 36.3831,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 91.5684,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Coptotermes heimi (Indian Subcontinent Subterranean Termite)",
      "pct_identity_vs_centroid": 91.5684,
      "query_coverage_pct": 99.8571,
      "raw_length_bp": 14908,
      "replacement_for_accession": null,
      "sector_code": "[D]",
      "sha256_prefix": "2536b13c56dc",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 3980.4196,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T025"
    },
    {
      "accession": "NC_009498.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "GAAGAGCCTGATTAAAGGACTATCGTGATAGGATAAAAAATGTAGAACCACAAATCTACCTTCATTACACCCAACAGAATTAAACTGTCACCACAAGCATCAAAAGCCAACGTGCCCCATACACCAAGATGTAAAAGAATCTATTAACCTAGAAAAGTAAGCTAAGAAAGCTAATGGGTTCATACCCCATAAATAGAGTAAACACTCTCTTCTCTAATGCCCAGTAACTCAACCAAAATCCTATTACTAACTACACTAGTAAGAGGTGTGTTAGTGGCCGTGTCCTCCAACTCATGATTTGGTGCATGAATAGGACTAGAGGTCAACTTAATATCATTTATTCCACTGATATCTAACACCAAAAATATATACAACACAGAAGCCTCACTAAAATACTTTATTGTCCAAGTATTGGCCTCAGCAACACTACTATTCATAGTAGTAATAAAAACAATAGCAGAAGATCTATTTACACTCGCCTTTATAGAAACTTCATATACACCAATAATCATTTGCACCCCCTTAATATTAAAGAGAGGTGCAGCACCATTTCACTGGTGATTCCCAGGAGTAATAGAGGGGCTGAGATGAGAAAACTGTGGACTATTAATAACAGTTCAAAAAGCAGCACCACTGATGTTAATATCATACCTAATCGAAATTAATGTCTTTACATCAAGAATTATCCTAACATCAACAATTATAGGAGCAATTGGAGGTCTCAACCAAACATCAATACGAAAGATCATAACATATTCATCTATCAACCACACCGGCTGAATACTAGCCGCGCTAATCACAGGGGATAATTTATGACTCACATACTTTATAATCTACTCAACGCTAGTATTAACTGTGCTATCAGCCATTGGACTATCCAAGGTATCATTTATTAACCAAACCCTTTTAACAAACAAGGAAGCCATACTAACAAAATTCATAATATTCACATCACTACTATCTTTGGGTGGGTTGCCCCCCTTTCTTGGATTCCTACCCAAATGAATTGTTATCCAAGAAATAATTGTAAACAAAATAACACCTATAGCAACAATCATAGTGATTACATCACTAATTACATTGTACTACTATCTAAAAATTTCATACTCAAGATTCATAATTCTAGGTGAAGAGCCCAAGTGGAACATTCAATCCCACAAAAACAAAACAGCCAAAAAAATTAGAGCTATAATCATATCATCAATCTCATTAACAGGAATATTAATATGCAGAGTTATAGCTGGTATAATTTAAAATTCCTTAGGCCTTAAGTTAAATAAACTAATAACCTTCAAAGCTATAAATAAAGGGCCATAACCTTTAGGCCTTGGTAAGTTTAACCTCACCCCTACAGAATTGCATTCTATTATCACAACGTGAATACAAGGCTAAATAATAGTGGAAGAGTCACGTACTAACCTCCTAAATAGATTTACAGCCTACCGCCTACTTATCTGTCTCAGCCACTCCACTAATTATTAACCGATGGTTATTCTCAACAAATCACAAAGACATTGGAACACTATACTTTGTATTCGGTGCCTGATCAGGAATGGTCGGAACATCACTTAGAATACTAATTCGAACAGAACTAGGACAACCTGGATCTCTAATTGGAGATGACCAGATCTACAACGTTATCGTTACTGCTCATGCATTCGTCATAATTTTCTTTATGGTCATACCAATCATGATTGGTGGATTCGGAAACTGACTAGTACCACTTATATTAGGAGCCCCAGACATAGCATTCCCACGAATAAACAACATAAGATTTTGATTACTCCCACCATCATTAAC",
      "detected_biotype": "DNA",
      "gc_percent": 33.8183,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.856,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Reticulitermes flavipes (Eastern Subterranean Termite RefSeq)",
      "pct_identity_vs_centroid": 83.856,
      "query_coverage_pct": 99.6429,
      "raw_length_bp": 16565,
      "replacement_for_accession": null,
      "sector_code": "[D]",
      "sha256_prefix": "4b0604ca5415",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2997.5836,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T026"
    },
    {
      "accession": "NC_009500.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "GAAGAGCCTGACTAAAGGATTATCGTGATAGGATAAAAAATGTAGAACCATAAATCTACCTTCATTACACCCAACAGAATTAAACTGTCACCACAAGCATCAAAAGCCAACGTGCACCATACACCAAGATGTAAAGAAAACCATTAACCTAGAAAAGTAAGCTAATCAAAGCTAATGGGTTCATACCCCATAAATAGAGTAAACACTCTCTTCTCTAATGCCCAGTAACTCAACCAAAATCCTATTACTAACTACACTAGTAAGAGGTGTGTTAGTGGCCGTGTCCTCCAACTCATGATTTGGTGCATGAATAGGACTAGAGGTCAACTTAATATCATTTATCCCACTGATATCTAACACTAAAAATATATACAATACAGAAGCCTCACTAAAATACTTTATCGTCCAAGTATTGGCTTCAGCAACACTGCTATTTATGGTAGTAATAAAAACGCTAGCAGAGGACTTATTCTCACTCGCCTTTATAGAAACCTCATATACACCAATAATCATTTGCACCCCCTTAATATTAAAAAGAGGTGCAGCACCATTTCACTGGTGATTCCCGGGGGTAATAGAAGGACTGAGATGAGAAAACTGTGGGTTATTAATAACAGTTCAAAAAGCAGCACCACTGATGTTAATGTCATATCTGATTGAAATTAATGTGTTTACATCAAGAATTATCCTAACATCAACAGTTATAGGAGCAATTGGAGGTCTCAACCAAACGTCAATACGAAAGATCATAACATACTCATCTATCAACCACACCGGTTGAATATTAGCCGCTTTAATCACAGGAGATAATTTGTGACTTACATACTTCATAATCTACTCAACGCTAGTACTAACTGTACTATCAGCCATTAAACTGTCCAGAGTATCATTTATTAACCAAACCCTCTTAACAAACAAGGAAGCCATACTAACAAAATTCATAATATTCACATCACTACTATCTCTTGGTGGGTTGCCACCCTTCCTTGGATTCCTACCCAAATGAATTGTTATCCAAGAAATAATTGTAAACAAAATAACACCTATAGCAACAATCATAGTGATTACATCACTAATTACACTATACTATTACCTAAAAATCTCATACTCAAGATTCATAATCCTAAGCGAAGAGCCCAAGTGGAACCTCCAATCCCATAAAAACAAAACATCTAAAAAAATTAGAGCTATAATTATATCATCAATCTCATTAACAGGAATATTAATATGCAGAATCATAGTTGGAATAATTTAAAACATTCCTTTAGGCCTTAAGTTAAACAAACTAATAACCTTCAAAGCTATAAATAAAGGGCCATAACCTTTAGGCCTTGGTAAGCTTACATAACCCTACCCCTACAGAATTGCATTCTATTATCACAAAGTGAATACAAGGCTAAAATAATAGTGGAAGAGTCACGTACTAACCTCCTAAATAGATTTACAGCCTACCGCCTACTTATCTGTCTCAGCCACTCCACTAATTATTAACCGATGGTTATTCTCAACAAATCATAAAGACATTGGAACACTGTACTTTGTATTCGGTGCTTGATCAGGAATGGTCGGAACATCACTCAGAATACTAATTCGAACAGAATTAGGACAACCTGGTTCTCTGATTGGAGACGATCAGATCTACAACGTCATCGTTACCGCCCACGCATTCGTTATAATCTTCTTTATGGTTATACCAATCATAATTGGTGGATTCGGAAACTGACTAGTACCACTTATATTAGGAGCCCCAGATATGGCATTCCCACGAATAAACAACATAAGATTTTGATTACTCCCACC",
      "detected_biotype": "DNA",
      "gc_percent": 34.1246,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 84.7849,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Reticulitermes virginicus (Dark Southern Subterranean Termite)",
      "pct_identity_vs_centroid": 84.7849,
      "query_coverage_pct": 100.0,
      "raw_length_bp": 16513,
      "replacement_for_accession": null,
      "sector_code": "[D]",
      "sha256_prefix": "d9e44703ee46",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 3125.6228,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T027"
    },
    {
      "accession": "NC_045240.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "AAGAGCCTGACTAAAGGACTATCGTGATAGGATAGAAGATGTAGAACCATTAAATCTACCTTCATTACACCTAACAGAATCAAACTGTCCCCACCAGCATCAAAAGCCAACGTGCCCCATACACCAAGATGTAAAGAAAAATTATTAACCTAGAAAAGTAAGCTAAATTCAAAGCTAATGGGTTCATACCCCATAAATAGAGTATAACACTCTCTTCTCTAATGCCTAGTAACTCAACCAAAATCCTCTTACTATCCACGCTAGTAAGAGGTGTGTTAGTGGCCGTGTCCTCCAACTCATGATTTGGTGCATGAATAGGACTAGAGGTCAACCTAATATCATTTATCCCATTGATATCTAACACTAAAAATATATACAACACGGAAGCCTCACTAAAATACTTTATTGTTCAAGTATTGGCTTCAGCTACACTGCTATTTATGGTGGTGATAAGAACACTAGCAGAGGATTTGTTCACACTAACATTTACGGAAACCTCATATACACCAATAATCATTTGCACCCCCTTGATATTAAAGAGAGGGGCAGCACCATTCCACTGATGGTTCCCAGGGGTGATAGAGGGCCTAAGATGGGAAAATTGTGGACTATTAATAACAATTCAAAAAACAGCACCATTGATATTAATATCGTATCTTATCGAAATTAATGTCTTTACATCAAGAATTATCCTTACATCAACAATTATAGGAGCAATCGGGGGTCTCAATCAAACCTCAATACGAAAAATCATAACATACTCGTCTATCAACCACACGGGTTGAATACTAGCCGCGTTAGTTACAGGAGACAATTTATGAATTACATACTTCATAATTTATTCAACACTAGTATTAACCGTACTATCAACCATCAAGCTATCCAGAGTGTCATTTATTAACCAAACCCTCTTAACAAATAAAGAGGCCACGCTAACAAAATTCATAATATTCACATCACTACTATCTCTGGGTGGTTTACCACCATTCCTTGGATTCCTACCCAAGTGAATTGTTATCCAAGAAATAATTATAAACAAAATAACACCTATAGCAACAATCATAGTAATTACATCACTAATTACATTATACTACTACCTAAAAATCTCGTACTCAAGATTCATAATCCTGAGTGAAGAACCAAAATGAAACCTCCAATCTTACAAAAACAAAACAGCCAAAAAAATTAGAGCCATAATTATATCATCAATTTCATTAACAGGAATATTAATATGCAGAATTATAGCTGGAGTAATTTAAAACTTTTTAGGCCTTAAGTTAAACAAACTAATAACCTTCAAAGCTATAAATAAAGGGCCGTAACCTTTAGGCCTTGGTAAGTTAATAACCCTACCCCTACAGAATTGCATTCTGTTATCATCAACGTGAATACAAGGCCAAAAATAATAGTGGAAGAGTCACGTACTAACTCCTAAATAGATTTACAGCCTACCGCCTACTTATCTGTCTCAGCCACTCCACTAATTATCAACCGATGGCTATTCTCAACAAATCATAAAGACATTGGAACATTATACTTTGTATTCGGTGCCTGATCAGGAATGGTTGGAACATCACTCAGAATACTAATCCGAACAGAATTAGGGCAACCTGGATCTCTAATTGGGGATGATCAAATCTACAACGTTATCGTCACTGCCCACGCATTCGTTATGATTTTCTTCATGGTCATACCGATCATAATTGGTGGGTTTGGAAACTGACTAGTACCACTTATATTAGGGGCTCCAGATATAGCATTCCCACGAATAAACAATATAAGATTCTGATTACTACCACC",
      "detected_biotype": "DNA",
      "gc_percent": 34.5262,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.8193,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Reticulitermes lucifugus (Mediterranean Subterranean Termite)",
      "pct_identity_vs_centroid": 83.8193,
      "query_coverage_pct": 99.8929,
      "raw_length_bp": 16263,
      "replacement_for_accession": null,
      "sector_code": "[D]",
      "sha256_prefix": "bf3e28598036",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2990.3701,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T028"
    },
    {
      "accession": "NC_025567.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "GAAGAGCCTGACTAAAGGACTATCGTGATAGGATAAAAAATGTAGAACCACAAATCTACCTTCATTACACCTAACAGAATTAAACTGTCACCACAAGCATCAAAAGCCAATGTGCCCCATACACCAAGATGTAAAAATAAACCTTAGACCTAGAAAAGTAAGCTAAGCAAAGCTAATGGGTTCATACCCCATAAATAGAGTAAATACTCTCTTCTCTAATGCCCAGTAACTCAACCAAAATCCTATTACTAACTACGCTAGTAAGAGGTGTGTTAGTGGCCGTGTCCTCCAACTCATGATTTGGTGCATGAATAGGACTAGAGGTCAATCTAATATCATTTATTCCATTGATATCTAACACTAAAAATATATACAACACGGAAGCCTCACTAAAATACTTTATTGTCCAAGTATTGGCTTCAGCAACGCTACTATTTATGGTAGTAATAAAAACACTAACAGAGGATTTATTCACACTCACATTTATGGAAACCTCATATACACCAATAATCATTTGCACCCCATTGATATTAAAAAGAGGAGCAGCACCATTCCACTGATGATTTCCAGGAGTAATAGAGGGGCTGAGATGAGAAAACTGCGGGCTATTAATAACAATTCAAAAAGCAGCACCACTGATACTAATATCATACCTGATCGAGATCAATGTATTTACATCAAGAATTATCTTAACATCAACAATTATAGGAGCAATTGGAGGCCTTAACCAGACATCATTACGAAAAATCATAACATATTCATCTATCAACCACACTGGTTGGATATTAGCCGCACTAATCATAGGGGATAATTTATGACTCACATACTTCATAATCTACTCAACACTAGTTTTAACTGTACTATCAACCATTAGGTTATCCAGAGCATCATTTATTAACCAAACCCTCTTAACAAATAAAGAAGCCACACCAACAAAATTTATAATATTCACATCACTACTATCCCTAGGCGGGTTGCCCCCATTCCTTGGATTCCTGCCTAAGTGAATTGTTATCCAAGAAATAGTTATAAACAAGATGACACCTATGGCAACAATCATAGTAATTACATCACTAATCACATTATACTACTACCTAAAAATCTCATATTCAAGCTTCATAATCCTAAGTGAGGAGCCCAAATGAAACATTCAATCTCACAAAAATAAAACATCCAAAAAAATCAGAGCCATAATTATATCATCAATCTCATTAACAGGAATATTAATATGTAGAATTATAGCTGGATTAATTTAAACTTTTAGGCCTTAAGTTAAACAAACTAATAACCTTCAAAGCTATAAATAAAGGGCCATAACCTTTAGGCCTTGGTAAGTTAACTTAAACCTTACCCCTACAGAATTGCATTCTATTATCACAGTGTGAATACAAGGCTTAAAATAATAGTGGAAGAGTCACGTACTAACCTCCTAAATAGATTTACAGCCTATCGCCTACTTATCTGTCTCAGCCACTCCACTAATTATCAACCGATGGCTATTCTCAACAAATCACAAAGATATTGGAACATTATACTTTGTATTCGGTGCCTGATCAGGAATGGTCGGAACATCACTCAGAATACTAATTCGAACAGAATTAGGACAACCTGGATCTCTAATTGGAGATGACCAAATCTACAACGTTATTGTTACTGCCCACGCATTTGTCATAATTTTCTTCATGGTTATACCAATCATAATTGGTGGATTCGGAAACTGACTAGTACCACTTATACTAGGAGCTCCAGATATGGCATTCCCACGCATAAACAACATAAGATTCTGATTACTACCACCAT",
      "detected_biotype": "DNA",
      "gc_percent": 34.7253,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 84.3828,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Reticulitermes chinensis (East Asian Subterranean Termite)",
      "pct_identity_vs_centroid": 84.3828,
      "query_coverage_pct": 99.8929,
      "raw_length_bp": 15925,
      "replacement_for_accession": null,
      "sector_code": "[D]",
      "sha256_prefix": "063377f7f63f",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 3064.3082,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T029"
    },
    {
      "accession": "NC_030034.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "AATGATGAGCCTGATTAAAGGACTATCGTGATAGGATAAAACATGTAGTGAAAACTACCTTCATTACATCTAACAGAATTAAACTGTCACCAACAAGCATCAAAAGCCACCGTGCACCATACACCAAGATGTATAAAAAATAAATCTAAACTTAGAAAAGTAAGCTAAGATAAAGCTAATGGGTTCATACCCCATAAATAGAGTAAATACTCTCTTCTCTAATGCCCAGTAACTCAACCAAAATCCTATTACTAATCACCTTAGTAAGAGGTATGTTAGTATCTGTATCGTCTAACTCATGAATTGGCGCATGAATAGGACTGGAAGTAAATTTAATATCATTTATTCCACTGATATCTAACATCAAAAATATATACAACACAGAAGCATCATTAAAGTACTTTATCGTTCAAGTACTAGCTTCAGCAACTCTATTATTCATAGTAGTAATAAAAACAGTAACAGAAGACCTGTTCACGCTCACGAACGTAGGAACCCCCTATACGCCAATAATTGTTTGCACACCTCTACTCTTAAAGAGAGGGGCTGCACCATTCCACTGGTGGTTCCCAGGAGTCATGGAAGGACTAAGATGAGAAAATTGTAGACTACTAATAACAATCCAGAAGGCCGCACCCATGATGCTAATATCATATCTAATCGAGGCCAACACCTTCATATTCAGAATCATTTTAGCATCAACAATTGTAGGAGCAATTGGGGGACTCAATCAAACCTCAATGCGAAAAATCCTAACATATTCATCTATCAACCATACTGGTTGAATATTAATAGCACTAATTACAGGGGACAATATATGAATCATATACTTCGTAACCTACTCAACATTAGTGCTAACAGTACTTTCAGTCATCAAGCTATCTAGAGTGTCATTTATCAACCAAATCTTAATAGCGAACAAGGAAAATAAACTAACGAAGTTTATAATATTCACCTCGCTGTTATCCCTAGGTGGGCTCCCACCATTTCTAGGATTTCTGCCAAAATGATTCATCATCCAGGCAATAACCATAAACGAACTAGTACCAATAGCAACCATTATAGTAGTTATATCACTAATTACGCTATACTACTATCTAAAAATTTCTTACTCAAGATTTATAATTCTAAATACAGAATCAAAGTGAAATATCCAACTACATAAAGCCAAATCAACCAAAAACATTAGAGCCATGACTCTATCATCTATCTCACTAATAGGAGCAATAATATGTACAATCATCATCAGAACAAACTAAGACCAGAAGGAAGGCCTTAAGTTAAACTAAACTAATAACCTTCAAAGCTATAAATAAAGGATGCTCGACCTTTAGGCCTTGGTAAGCCTTTACACCTACCCCTACAGAATTGCATTCTGTCATCACAAAATGAATACAAGGCTAACCATCATAGTGGAAGAGCAACGTCAACGCCCCTAAATAGATTTACAGCCTATCGCCTACTAATTTATCTCAGCCACCCCACTAATTTTTAGCCGATGGTTTTTTTCAACCAACCACAAGGACATTGGAACACTATATTTCGTATTTGGTGCTTGATCAGGTATAGTAGGTACGTCCCTCAGAATACTTATCCGAACAGAACTAGGGCAACCCGGATCTCTAATTGGAGACGACCAAATCTACAACGTCATCGTCACAGCACACGCATTTGTTATAATCTTCTTCATAGTTATACCAATTCTAATTGGTGGATTCGGAAATTGACTAGTGCCCCTAATACTTGGAGCACCAGACATAGCATTCCCACGAATAAACAACATGAGATTCTGATTACTCC",
      "detected_biotype": "DNA",
      "gc_percent": 34.9283,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 89.1227,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Heterotermes validus (Australasian Subterranean Termite)",
      "pct_identity_vs_centroid": 89.1227,
      "query_coverage_pct": 100.0,
      "raw_length_bp": 14922,
      "replacement_for_accession": null,
      "sector_code": "[D]",
      "sha256_prefix": "f7787c60725e",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 3672.9452,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T030"
    },
    {
      "accession": "NC_030032.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "AATGATGAGCCTGATTAAAGGACTATCGTGATAGGATAAAACATGTAGTGCAAACTACCCTCATTACATCAAACAGAATCAAACTGTCACCATCAAGCATCAAAAGCCACCGTGCACCATACACCAAGATGTATAATAAGTTAAACCTAAACTTAGAAAAGTAAGCTAAGATAAAGCTAATGGGTTCATACCCCATAAATAGAGTAAAACACTCTCTTCTCTAATGCCCAGTAACTCAACCAAAATCCTATTGCTAATCACTTTAGTAAGAGGTATGTTAGTATCTGTATCGTCCAACTCGTGAATTGGCGCATGAATAGGACTGGAAGTAAATTTAATATCATTTATTCCACTGATATCTAACATCAAAAATATATACAATACAGAAGCGTCATTAAAGTACTTTATCGTTCAAGTACTAGCTTCAGCAACTCTGCTATTCATAGTAGTAATAAAAACGGCAACAGAAGACCTGTTTACGCTCACGAACGTAGGAACTCATCATACGCCAATGATTGTTTGCACGCCCCTACTCTTAAAAATAGGGGCAGCACCATTCCACTGATGGTTCCCAGGAGTAATGGAAGGATTAAGATGAGAAAATTGTGGACTACTAATAACGATCCAGAAGGCTGCTCCCATGGTGCTAACATCATACCTAATCGAGGCCAACACCTTCATGTTCAGAATCATTTTAACATCAACAATCGTAGGGGCAATTGGAGGACTTAACCAAACCTCAATACGAAAAATTCTAACATACTCATCCATCAACCACACCGGCTGAATACTAATAGCACTAGTTACAGGGGACAATATATGGATCATGTACTTTGCAACCTATTCAACACTAGTGCTAACAGTATTATCAGTCATCAAGCTATCCAGAGTGTCATTCATCAACCAAATCTTAATAACAAACAAGGAAAATAAACTAATGAAATTCATAATGTTTACATCACTACTCTCTCTGGGGGGACTTCCGCCGTTTCTAGGATTCCTACCAAAATGATTTATTATTCAGGCAATAACAATAAATGAGCTAATGCCCATGGCAACCATTATGGTAATCACATCACTAATTACGCTATACTACTACCTAAAAATCTCTTACTCAAGATTTATAATTCTAAGCACAGAATCAAAGTGGAACCCCCAATCACACAAAATCAAATCAACCAAAAACATTAGAGCCATGGCCCTATCGTCCATCTCACTAATAGGAGCAATGATATGCACAATCATCATCGGAACAAACTAAAAAGAAGGCCTTAAGTTAAACTAAACTAATAACCTTCAAAGCTATAAATAAAGGATGTTTGACCCTTTAGGCCTTGGTAAACCTTTAAGCCTACCCCTACAGAATTGCATTCTGTCATCACAAAATGAATACAAGGCTTAAAAACCACATAGTGGAAGAACAACGTCAGAGTCCCTAAATAGATTTACAGCCTATCGCCTACTAATTCATCTCAGCCATTCCACTAATTTTTAGCCGATGATTTTTCTCAACCAACCACAAGGACATTGGAACACTATACTTCGTATTTGGTGCCTGATCAGGTATAGTAGGAACGTCCCTTAGAATACTTATCCGAACAGAACTAGGACAGCCCGGATCTCTAATTGGAGACGACCAAATCTACAACGTTATTGTCACAGCCCACGCATTCGTTATAATCTTCTTCATGGTCATGCCAATTATAATTGGTGGGTTTGGGAACTGATTGGTGCCCCTAATACTTGGAGCGCCAGACATGGCATTCCCACGAATAAACAACATAAGATTTTGATTACTCC",
      "detected_biotype": "DNA",
      "gc_percent": 36.2316,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 88.4218,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Heterotermes tenuis (Neotropical Agricultural Subterranean Termite)",
      "pct_identity_vs_centroid": 88.4218,
      "query_coverage_pct": 100.0,
      "raw_length_bp": 14940,
      "replacement_for_accession": null,
      "sector_code": "[D]",
      "sha256_prefix": "62b606951df4",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 3582.7767,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T031"
    },
    {
      "accession": "NC_018126.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Rhinotermitidae Subterranean Clade",
      "cleaned_sequence": "AATGATGAGCCTGAATAAAGGAATATCGTGATAGGATATAATATGTAGGCACGAAACCTACCCTCATTATTACGTCCGACAGAATTAAACAGTCACCATCAAGCATCAAAAGCCACCGTGCACCATACACCAAGACGTAAAATGTCTATTAAAAAATTCATTAACATAGAAAAGTAAGCTAATTCAAGCTAATGGGTTCATACCCCATAAATAGAGTATAAACCTCTCTTCTCTAATGCCCAGCAACCCAACCAAAATCCTCTTACTCACAACCATGGTAAGAGGTGTATTAGTATCTGTATCCTCCAATTCGTGATTTAGAGCATGAATAGGATTAGAGGTAAATCTAATATCATTTATCCCACTAATATCCAATATCAAAAACATATATAACACAGAAGCATCACTAAAGTATTTTATTGTCCAAGTATTAGCCTCAGCAACACTAATATTTGTAGTAACGATAAAAGCAGCAACCGAAGGCCTGTTTACCCACACAGAAGCCTATAGAACCACCATACTAATCTGCACCCCCCTTTTACTAAAAAGAGGAGCTGCTCCTCTTCATTGGTGATTCCCCGGGGTAATAGAAGGGTTGAGATGAGAAAATTGCACTTTATTAATAACAATCCAAAAGGCAGCACCCTTAATACTACTATCTTACTCAATCGAAAACAACGCATTTACCACCACAATCATCCTATCATCAGTAATCATCGGAGCTATTGGAGGGCTAAATCAAACCTCTCTACGAAAAATTATAACATACTCATCAATCAACCACACAGGATGAATATTAACAGCAATAATTACAAGAGAGAGAATATGAGTAATATACTTCGCCACATACTCACTGCTAGTAACAACAGTAGTAGCTACAATCAAACTATCAAAGGCATCCTTCATCAACCAAACAATAATAACTAACAAGGAAAGACTAGTTATGAAATTCATAATGTTCACATCCCTGTTATCATTAGGAGGCCTACCCCCATTCACAGGATTCATACCAAAATGATTTGTCATCCAAAGAATAACAACAAGCAACCTAGCCCCAATGGCCACCCTAATAGTAGCAATGTCACTAATCACACTTTACTACTACCTAAAAATCTGCTACTCAAGATTCCTAATCCTAAACGCAGAGCCAAAATGAAGTACCAGAATCCAAAAAAACTACCCAAGCAGACATATTAGAGCCATAATTCTAACAGCAATTTCCCTAGCAGGAATACTTCTATGCACAACCCTAACCAGCATGACATAAATAAGACCTTAAGTTAAAAAAACTCGTAGCCTTCAAAGCTATTAATAAAGGGCCAACCTTTAGGCCTTGATAGCTAATTACCTACCCCTACAGAATTGCATTCTGTAATCACAAAAATGAATACAAGGCCAAATAGTGGAGGGACAACGTTCACGCCCCTAAGTAGATTTACAGCCTACCGCCTACTAATTAATCTCAGCCACCCCACTAATAATTAATCGATGACTATTCTCAACAAACCACAAAGACATTGGAACCTTATACTTTGTGTTCGGTGCATGATCAGGAATAGTAGGAACATCCCTCAGCATGCTAATTCGAACAGAATTAGGACAACCTGGATCTCTAATTGGAGATGACCAAATCTATAACGTCATTGTAACAGCCCACGCATTCATCATAATCTTCTTCATAGTAATGCCCATCATAATTGGTGGATTCGGAAATTGACTAGTGCCACTAATGCTAGGCGCACCAGACATAGCATTCCCACGAATAAACAACATAAGATTTTGACTCCTACCACCATCACT",
      "detected_biotype": "DNA",
      "gc_percent": 34.0267,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 81.9243,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Schedorhinotermes breinli (Dimorphic-Soldier Rhinotermitid)",
      "pct_identity_vs_centroid": 81.9243,
      "query_coverage_pct": 99.75,
      "raw_length_bp": 15864,
      "replacement_for_accession": null,
      "sector_code": "[D]",
      "sha256_prefix": "fe3889e3f213",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2752.3254,
      "super_blast_e_value": 1e-180,
      "tip_code": "D:T032"
    },
    {
      "accession": "PV077934.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "QUARANTINED_NUMT",
      "chimera_5p_3p_delta_pct": 1.8,
      "clade_group": "Termitidae Macrotermitinae",
      "cleaned_sequence": "",
      "detected_biotype": "DNA",
      "gc_percent": 35.542,
      "included_in_cleaned_cohort": false,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 2,
      "locus": "Mitochondrial Genome (UNVERIFIED)",
      "nearest_neighbor_accession": "NC_025522.1",
      "nearest_neighbor_identity_pct": 88.4823,
      "nearest_neighbor_taxon": "Macrotermes natalensis (African Mound-Building Fungus Termite)",
      "organism": "Heterotermes longiceps isolate 158 (UNVERIFIED GenBank)",
      "pct_identity_vs_centroid": 88.4823,
      "query_coverage_pct": 100.0,
      "raw_length_bp": 15258,
      "replacement_for_accession": null,
      "sector_code": "[E]",
      "sha256_prefix": "67d195bec455",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 3087.752,
      "super_blast_e_value": 1e-180,
      "tip_code": "E:T033"
    },
    {
      "accession": "NC_025522.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Macrotermitinae",
      "cleaned_sequence": "ATGAAGAGCCTGATTAAAGGATTATCGTGATAGGATAAAACATGTAGACCAAGTCTACCCTCATTACATCAGACAGAATTAAACTATCACCACCAAGCATCAAAAGCCAACGTGCACCATACACCAAGATGTAAAAAACAAAATTAAAGCAGAAAAGTAAGCTAAATCAAGCTAATGGGTTCATACCCCATAAATAGAGTAAACAACTCTCTTCTCTAATGCCCAGAAACTCAACCAAAATCCTCTTATTAACCACTTTAATAAGAGGGGTATTAGTATCTGTATCCTCCAATTCGTGACTCGGCGCATGAATAGGACTGGAAATCAACCTAATATCATTTATCCCTCTGATATCCAACGTCAAAAATATGTATAACACAGAAGCCTCACTAAAATACTTCATTGTACAAGTACTAGCCTCAGCAACCCTATTATTTATAGTAGTGATAAAGACACTAACAGAGGATCTATTCACCCTGGATGAAAACGCATATACACCAATAATCATTTGTACCCCCCTCCTGCTAAAAAGTGGAGCCGCACCACTCCACTGATGATTCCCAGGAGTAATAGAAGGATTAAGATGGGAAAATTGCGCACTACTAATAACAGTACAAAAGGCTGCTCCACTAATATTAATATCATACCTGATTGAAATTAATACCTTCACACTAAGAATTATTCTAATATCAACAGTTGTAGGAGCAATTGGAGGACTGAATCAAACCTCTATACGAAAAATTTTAACCTACTCATCCATCAACCATACCGGATGAATACTAATTGCATTAACCATAGGAGAAAACCTATGAATAGCATACTTCATAGTATACTCAACTCTAGCATTAACAGTTGTATCAGCCATTAAACTGTCCGGTGCATCATTCATTAACCAAACAATAATAACAAACAAAGAAGCTACCCTAGTAAAATTTATAATATTCACATCACTACTGTCCCTAGGCGGACTACCCCCTTTTCTGGGATTCCTACCAAAATGAATCGTTATCCAAGCAATAATCATAAATAGACTAGCCCCTATAGCAACACTAATAGTAGTAACATCACTAATTACTCTCTACTACTACCTAAAAATCTCTTACTCAAGATTCATGATTTTAAATACAGAACCTAAATGAAACCTAAGCTCCTACAAAAGAAAAAAAACAAGAAACACCAAAGCACTAACATTATCATCGATCTCACTAACAGGAATAATAGTATGCACTATCATTGCCAACATCTACTAAACAAGCAAGAAAAGGCCTTAAGTTAAATAAACTAATATCCTTCAAAGCTATAAATAAAGGGCTGCCTTTAGGCCTTGGTAAGAACTCAACCCACCCCTATAGAATTGCATTCTATAATCACAAAATGAATACAAGGCCAAACCCCAAACAACAATAGTGGAAAAGTAACGTAAATACCCCTAAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCACTCCACTAATCTTCACCCGATGATTTTTCTCAACTAATCACAAAGACATTGGAACACTATACTTTGTATTTGGAGCCTGATCAGGAATGGTTGGAACATCCCTAAGAATACTAATCCGAACAGAACTTGGACAACCAGGATCCTTAATTGGAGACGATCAAATCTACAACGTCATCGTCACAGCCCATGCTTTCGTAATAATCTTCTTCATAGTAATACCAATCATGATTGGAGGATTCGGAAACTGACTAGTACCGCTAATATTAGGAGCACCAGACATAGCATTCCCACGAATAAACAACATAAGATTCTGATTATTACCACCAT",
      "detected_biotype": "DNA",
      "gc_percent": 34.3828,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.6467,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Macrotermes natalensis (African Mound-Building Fungus Termite)",
      "pct_identity_vs_centroid": 83.6467,
      "query_coverage_pct": 99.8929,
      "raw_length_bp": 16325,
      "replacement_for_accession": "PV077934.1",
      "sector_code": "[E]",
      "sha256_prefix": "ebb22bacd6c6",
      "source_origin": "ReserveReplacement",
      "strand_orientation": "+",
      "super_blast_bit_score": 2978.6482,
      "super_blast_e_value": 1e-180,
      "tip_code": "E:T033"
    },
    {
      "accession": "NC_018128.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Macrotermitinae",
      "cleaned_sequence": "ATGACGAGCCTGATTAAAGGATTATCGTGATAGGATAAAATATGTAGACCAAGTCTACCATCATTACATCAGACAGAATTAAACTATCACCACCAAGCATCAAAAGCCAACGTGCACCATACACCAAGATGTAAAAAACAAAATTTAAAGCAGAAAAGTAAGCTAAATCAAGCTAATGGGTTCATACCCCATAAATAGAGTAAACAACTCTCTTCTCTAATGCCCAGAAACTCAACCAAAATCCTCTTATTAACCACCTTAGTAAGAGGGGTATTAGTATCTGTGTCCTCCAATTCATGACTCGGTGCATGAATAGGCCTGGAGATCAACCTAATATCATTTATCCCTCTGATATCCAACGTCAAAAATATGTATAACACAGAAGCCTCACTAAAATACTTCATTGTACAAGTACTAGCCTCAGCAACCCTATTATTTATAGTAGTAATAAAGACACTAACAGAGGATTTATTCACCCTGGATGAAAACGCATATACACCAATAATCATTTGTACCCCCCTCCTGCTAAAAAGTGGAGCCGCACCACTCCACTGATGATTCCCAGGAGTAATAGAAGGATTAAGATGGGAAAATTGCGCACTACTAATAACAGTACAAAAGGCTGCTCCACTGATATTAATATCATACCTGATTGAAATTAATACCTTCACACTAAGAATCATTCTAATATCAACAGTTGTAGGAGCAATCGGAGGACTGAACCAAACCTCTATACGAAAAATTTTAACCTATTCATCCATCAACCATACCGGATGAATACTAATTGCATTAACTATAGGAGAAAACCTATGAATAGCATACTTCATAGTATACTCAACTCTAGCATTAACAGTTGTATCAGCCATTAAACTGTCTGGGGCATCATTCATTAACCAAACCATAATAACAAACAAAGAAACTACCCTAGTAAAATTTATAATATTCACATCACTACTATCCCTAGGTGGACTACCACCCTTCCTGGGATTCCTACCAAAATGAATCGTTATCCAAGCAATAATCATAAATAGACTAGCTCCTATAGCAACACTAATAGTAGTAACATCACTGATCACTCTCTACTACTATCTAAAAATCTCTTACTCAAGATTCATGATTTTAAATACAGAACCTAAATGGAACCTAAACTCCTACAAAAGAAAAAAAACAAGAAACACCAAGGCACTAATATTATCATCGATCTCACTAACAGGAATAATGGTATGCACCATCATTGCCAACATCTACTAAACCAAGCAAAAGGCCTTAAGTTAAATACAAACTAATATCCTTCAAAGCTATAAATAAAGGGTTGCCTTTAGGCCTTGGTAAGAACTCAACCCACCCCTATAGAATTGCATTCTATAATCACAAAATGAATACAAGACCAAACCCCAAAACAACAATAGTGGAAAAGTAACGTAAATACCCCTAAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCACTCCACTAATCTTCACCCGATGATTTTTCTCAACTAATCACAAAGACATTGGAACACTATACTTCGTATTCGGAGCCTGATCAGGAATGGTTGGAACATCCCTAAGAATACTAATCCGAACAGAACTTGGACAACCAGGATCCCTAATTGGAGACGATCAAATCTACAACGTCATCGTCACAGCCCATGCTTTCGTAATGATCTTCTTCATAGTAATACCAATCATGATTGGAGGATTCGGAAACTGATTAGTACCGCTAATATTAGGAGCACCAGACATAGCATTCCCACGAATAAACAACATAAGATTTTGATTATTACCACC",
      "detected_biotype": "DNA",
      "gc_percent": 34.4383,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.3333,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Macrotermes subhyalinus (Savanna Cathedral-Mound Termite)",
      "pct_identity_vs_centroid": 83.3333,
      "query_coverage_pct": 99.9643,
      "raw_length_bp": 16351,
      "replacement_for_accession": null,
      "sector_code": "[E]",
      "sha256_prefix": "12f49f389e0e",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2942.5808,
      "super_blast_e_value": 1e-180,
      "tip_code": "E:T034"
    },
    {
      "accession": "NC_018599.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Macrotermitinae",
      "cleaned_sequence": "ATGACGAGCCTGACTAAAGGATTATCGTGATAGGATAAAACATGTAGACAAAATCTACCATCATTACATCAAATAGAATTAAACTATCACCACCAAGCATCAAAAGCTAACGTGCACCATACACCAAGATGTAAAAAACAAAATTAAAGCAGAAAAGTAAGCTAAAAAAGCTAATGGGTTCATACCCCATAAATAGAGTAAAACTCTCTTCTCTAATGCCCAGAAACTCAACTAAAATCCTATTATTAACCACCTTAGTAAGAGGGGTATTAGTATCTGTGTCCTCCAATTCATGACTCGGAGCATGAATAGGATTAGAAATTAATCTAATATCTTTTATCCCCCTAATATCCAACGTCAAGAACATGTATAACACAGAAGCCTCACTAAAATACTTCATTGTACAAGTACTAGCATCAGCCACCCTACTGTTTATAGTAGTAATAAAAACATTAACAGAGGATTTATTTGCCCTAGATGAAAACGCATATACACCAATAATCATCTGTACCCCACTCCTGCTAAAAAGTGGAGCCGCACCACTCCACTGGTGATTCCCAGGAGTAATAGAAGGATTAAGATGGGAAAATTGCGCACTACTAATAACAGTACAAAAAGCTGCCCCACTAATACTAATATCGTACCTAATCAAAATCAATACCTTCACACTAAGAATTATTTTAGCATCAACAATTGTAGGAGCAATTGGAGGATTAAACCAAACCTCCATACGAAAAATCCTAACCTACTCATCAATCAATCACACCGGATGAATGCTAACTGCACTAACTATAGGAGAAAATCTATGAATAATTTACTTCACAGTATATTCAATCCTAACACTAACAGTCGTATCAGCCATCAAACTGTCCGGAGTATCCTTCATTAACCAAACCATAATAACAAATAAAGAAATTGCCCTTATAAAATTTATAATATTTACATCCCTACTATCTTTAGGTGGGCTACCCCCCTTCCTAGGATTCCTACCAAAATGAATCATTATCCAAGCAATAATTATAAACAGAATAGCTCCCATAGCAACACTAATAGTAATAACATCACTAATCACCCTATACTATTACCTAAAAATTTCTTATTCAAGATTCATAATCTTAAACACAGAGCCCAAATGAAACCTAAGATCTTACAAAACCAGAAGAATACAAAGCACCAGAGCAATATTACTTTCATCAATCTCTTTAACAGGAATGATAGTATGCACTACTATCTCCAACATCCTTTAAATCAAAAGAAGGCCTTAAGTTAAATAAACTAATATCCTTCAAAGCTATAAATAAAGGGCTGCCTTTAGGCCTTGGTAAACTTAAATCACCCCTATAGAATTGCATTCTATAATCACAAAATGAATACAAGGCCAAAAAACAATAGTGGAAAAGTAACGTAAATACCCCTAAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCACTCCACTAATCTTCACTCGATGATTTTTCTCAACTAATCACAAGGATATTGGAACACTATATTTTGTATTCGGGGCCTGATCAGGAATGGTTGGTACTTCCCTAAGAATATTAATTCGAACAGAATTAGGACAACCAGGATCCCTAATTGGAGACGACCAAATCTACAATGTCATTGTCACAGCACACGCCTTCGTTATAATTTTCTTCATAGTAATACCAATTATGATTGGAGGATTCGGAAACTGATTAGTACCACTAATATTAGGAGCACCAGACATAGCATTCCCACGAATAAACAACATAAGATTTTGATTACTACCACCATCACTAACCCTTCTTC",
      "detected_biotype": "DNA",
      "gc_percent": 33.1368,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.5169,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Macrotermes barneyi (East Asian Fungus-Cultivating Termite)",
      "pct_identity_vs_centroid": 83.5169,
      "query_coverage_pct": 99.3571,
      "raw_length_bp": 15940,
      "replacement_for_accession": null,
      "sector_code": "[E]",
      "sha256_prefix": "23f2fd1a512b",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2950.696,
      "super_blast_e_value": 1e-180,
      "tip_code": "E:T035"
    },
    {
      "accession": "NC_084268.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Macrotermitinae",
      "cleaned_sequence": "ATGACGAGCCTGATTAAAGGATTATCGTGATAGGATAAAACATGTAGACCAAGTCTACCATCATTACATCAGACAGAATTAAACTATCACCACCAAGCATCAAAAGCCAACGTGCACCATACACCAAGATGTAAAAAAACAAAATTTAAAGCAGAAAAGTAAGCTAAATCAAGCTAATGGGTTCATACCCCATAAATAGAGTAAACAACTCTCTTCTCTAATGCCCAGAAACTCAACCAAAATCCTCTTATTAACCACCTTAGTAAGAGGGGTATTAGTATCTGTGTCCTCCAATTCATGACTCGGTGCATGAATAGGCCTGGAGATCAACCTAATATCATTTATCCCTCTGATATCCAACGTCAAAAATATGTACAACACAGAAGCCTCACTAAAATACTTCATTGTACAAGTACTAGCCTCAGCAACCCTATTATTTATAGTAGTAATAAAGACACTAACAGAGGATTTATTCACCCTGGATGAAAACGCATATACACCAATAATCATTTGTACCCCCCTCCTGCTAAAAAGTGGAGCCGCACCACTCCACTGATGATTCCCAGGAGTAATAGAAGGATTAAGATGGGAAAATTGCGCACTACTAATAACAGTACAAAAGGCTGCTCCACTAATATTAATATCATACCTGATTGAAATTAATACCTTCACACTAAGAATTATTCTAATATCAACAGTTGTAGGAGCAATTGGAGGACTGAACCAAACCTCTATACGAAAAATTTTAACCTACTCATCCATCAACCATACCGGATGAATACTAATTGCATTAACTATAGGAGAAAATCTATGAATAGCATACTTCATAGTATACTCAACCCTAGCACTAACAGTTGTATCAGCCATTAAACTGTCTGGGGCATCATTCATTAACCAAACCATAATAACAAACAAAGAAACTACCCTAGTAAAATTTATAATATTCACATCACTACTATCCCTAGGTGGACTACCACCCTTCCTGGGATTCCTACCAAAATGAATCGTTATCCAAGCAATAATCATAAACAGACTAGCTCCCATAGCAACACTAATAGTAGTAACATCACTGATCACCCTCTACTACTACCTAAAAATCTCTTACTCAAGATTCATGATTTTAAATACAGAACCTAAATGGAACCTAAACTCCTACAAAAGAAAAAAAACAAGAAACACCAAGGCACTAATATTATCATCGATCTCACTAACAGGAATAATAGTATGCACCATCATTGCCAACATCTACTAAACCAAGCAAGGAAAGGCCTTAAGTTAAATATAAACTAATATCCTTCAAAGCTATAAATAAAGGGTCGCCTTTAGGCCTTGGTAAGAACTCAACTCACCCCTATAGAATTGCATTCTATAATCACAAAATGAATACAAGGCCAAACCCCAAACAACAATAGTGGAAAAGTAACGTAAATACCCCTAAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCACTCCACTAATCTTCACCCGATGATTTTTCTCAACTAATCACAAAGACATTGGAACACTATACTTCGTATTCGGAGCCTGATCAGGAATGGTTGGAACATCCCTAAGAATATTAATCCGAACAGAACTTGGACAACCAGGATCCCTAATTGGAGATGATCAAATCTACAACGTCATCGTCACAGCCCATGCTTTCGTAATAATCTTCTTCATAGTAATACCAATCATGATTGGAGGATTCGGAAACTGACTAGTACCACTAATATTAGGAGCACCAGACATAGCATTCCCACGAATAAACAACATAAGATTTTGATTATTACC",
      "detected_biotype": "DNA",
      "gc_percent": 34.3513,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.4752,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Macrotermes herus (East African Fungus-Comb Termite)",
      "pct_identity_vs_centroid": 83.4752,
      "query_coverage_pct": 100.0,
      "raw_length_bp": 16372,
      "replacement_for_accession": null,
      "sector_code": "[E]",
      "sha256_prefix": "0fa1ee42be73",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2958.8111,
      "super_blast_e_value": 1e-180,
      "tip_code": "E:T036"
    },
    {
      "accession": "NC_034288.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Macrotermitinae",
      "cleaned_sequence": "ATGAAGAGCCTGATTAAAGGATTATCGTGATAGGATAAAACATGTAGACAAAATCTACCCTCATTACATCAAATAGAATTAAACTATCACCATCAAGCATCAAAAGCCAACGTGCACCATACACCAAGATGTAAAAAACAAAATTAAAATAGAAAAGTAAGCTAAAAAAGCTAATGGGTTCATACCCCATAAATAGAGTAAAACTCTCTTCTCTAATGCCCAGAAACCCAACTAAAATCCTATTACTAATTACCCTAGTAAGAGGTGTGTTAGTATCTGTCTCCTCCAATTCATGGCTTGGGGCATGAATAGGATTAGAAATTAATCTAATATCATTTATCCCCCTAATATCCAACGTAAAGAACATATACAACACAGAAGCCTCATTAAAATATTTCATTGTACAAGCACTAGCATCAGCCACCCTATTGTTTATAGTAGTAATAAAAACATTAACAGAGGATTTATTTACCTTGGATGAAAATGCATATACCCCAATAATCGTCTGTACCCCACTCCTGTTAAAAAGTGGAGCTGCACCACTCCACTGGTGATTCCCAGGAGTAATAGAAGGATTAAGATGGGAAAATTGCGCACTACTAATAACAGTACAAAAAGCTGCCCCACTGATATTAATGTCATACCTAATCGAAATTAATATCTTCACACTAAGAATTATTCTAACATCAACAATTGTAGGAGCAATTGGAGGTTTAAATCAAACCTCTATACGAAAAATCCTAACTTACTCATCAATTAACCACACCGGATGAATATTAACTGCACTGGCCATAGGAGAAAATTTATGGATAACCTACTTCACGGTATATTCAATCCTAACATTGACAGTCGTATCAGCCATCAAACTATCCGGAGTATCTTTCATTAACCAAATCATAATAACAAATAAAGAAATTGCCCTTATAAAACTTATAATATTCACATCCCTACTATCTTTGGGTGGATTACCCCCCTTCCTAGGATTCCTACCAAAATGAATTATTATCCAAGCAATAATTATAAACAAACTAGCCCCTATAGCAACACTAATAGTAGTAACATCACTAATTACCCTATACTATTACCTAAAAATTTCTTATTCAAGATTTATAATCTCGAGCACAGAGCACAAATGAAACCTAACATCCTCTAAAACCAGAAAAACACAAAGCACCAGAGCGCTACTACTTTCATCAATCTCCCTAACAGGAATGATAGTATGCACTATTATCTCTAACATCCTCTAAAACCAGAAGAAGGCCTTAAGTTAAAGAAACTAATATCCTTCAAAGCTATAAATAAAGGGCTGCCTTTAGGCCTTGGTAAACTTAATTCACCCCTATAGAATTGCATTCCATAATCACAAAATGAATACAAGGCCAAAAAACACAATAGTGGAAAAGTAACGTAAATACCCCTGAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCACTCCACTAATCTTCACTCGATGATTCTTCTCAACTAATCACAAGGACATTGGAACACTATACTTCGTATTCGGGGCCTGATCAGGAATGGTTGGTACCTCCCTAAGAATACTAATTCGAACAGAACTAGGACAACCAGGATCTTTAATTGGAGACGATCAAATCTACAATGTAATCGTCACAGCCCATGCCTTCATCATAATTTTCTTCATAGTAATACCAATTATGATTGGAGGATTCGGAAACTGATTAGTACCACTTATATTAGGAGCACCAGACATAGCATTCCCACGAATAAACAACATAAGATTTTGACTATTACCACCATCACTAACCCTTC",
      "detected_biotype": "DNA",
      "gc_percent": 33.2978,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.1915,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Macrotermes yunnanensis (Yunnan Subtropical Fungus Termite)",
      "pct_identity_vs_centroid": 83.1915,
      "query_coverage_pct": 99.4643,
      "raw_length_bp": 15965,
      "replacement_for_accession": null,
      "sector_code": "[E]",
      "sha256_prefix": "1e1292ff9a9e",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2910.1202,
      "super_blast_e_value": 1e-180,
      "tip_code": "E:T037"
    },
    {
      "accession": "NC_034050.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Macrotermitinae",
      "cleaned_sequence": "ATGACGAGCCTGATTAAAGGATTATCGTGATAGGATAAAATATGTAGACCAAGTCTACCATCATTACATCAGACAGAATTAAACTATCACCACCAAGCATCAAAAGCCAACGTGCACCATACACCAAGATGTAAAAAACAAAATTAAAGCAGAAAAGTAAGCTAAATCAAGCTAATGGGTTCATACCCCATAAATAGAGTAAACAACTCTCTTCTCTAATGCCCAGAAACTCAACCAAAATCCTCTTATTAACCACCTTAATAAGAGGGGTATTAGTATCTGTGTCCTCCAATTCATGACTCGGTGCATGAATAGGCCTGGAAATCAACCTAATATCATTTATCCCTCTGATATCCAACGTCAAAAACATGTACAACACAGAAGCCTCACTAAAATACTTCATTGTACAAGTACTAGCCTCAGCAACCCTATTATTTATAGTAGTAATAAAGACATTAACAGAGGATTTATTCACTCTGGATGAAAACGCATACACACCAATAATCATTTGTACCCCTCTCCTGCTAAAAAGTGGAGCCGCACCACTCCACTGATGATTCCCAGGAGTAATAGAAGGATTAAGATGGGAAAATTGCGCACTACTAATAACAGTACAAAAGGCTGCTCCACTAATATTAATATCATACCTGATTGAAATTAATACCTTCACACTAAGAATTATTCTAATATCAACAGTTGTAGGAGCAATTGGAGGATTGAACCAAACCTCTATACGAAAAATTTTAACCTATTCATCCATCAACCATACCGGATGAATACTAATTGCACTATCTATAGGAGAAAACCTATGAATAATATACTTCATAGTATATTCAACTCTAGCACTAACAGTTGTATCAGCCATTAAACTATCTGGGGCATCATTCATTAACCAAACCATAATAACAAATAAAGAAATTACCCTAATAAAATTCATAATATTCACATCACTTCTATCCCTGGGCGGACTACCCCCTTTCCTGGGATTCCTACCAAAATGAATTGTTATTCAAGCAATAATTATAAATAGACTAGCTCCTATAGCAACACTAATGGTAGTAACGTCACTAATCACTCTATACTACTATCTAAAAATCTCTTACTCAAGATTTATGATTTTAAATACAGAACCTAAATGAAATTTAAACTCCTACAAAAGAAAAAAAACAAGAAACACCAAAGCACTAATATTATCATCGATCTCACTAACAGGAATAATAGTATGTACAATCATTGCCAACATCTACTAAACCAAGCAAGGAAAGGCCTTAAGTTAAATAAACTAATATCCTTCAAAGCTATAAATAAAGGGCTGCCTTTAGGCCTTGGTAAGAACTCAACCCACCCCTATAGAATTGCATTCTATAATCACAAAATGAATACAAGGCCAAACCCCAAACAATAGTGGAAAAGTAACGTAAATACCCCTAAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCACTCCACTAATCTTCACCCGATGATTTTTCTCAACTAATCATAAAGACATTGGAACACTATACTTCGTATTTGGAGCCTGATCAGGAATGGTTGGAACATCCCTAAGAATATTAATCCGAACAGAACTTGGACAACCAGGATCATTAATTGGGGACGACCAAATCTACAACGTCATCGTCACAGCTCACGCTTTCGTAATAATCTTCTTCATAGTAATACCAATCATGATTGGAGGATTCGGAAACTGACTAGTACCGCTAATATTAGGAGCACCAGACATAGCATTCCCTCGAATAAACAACATAAGATTCTGATTATTACCACCATCA",
      "detected_biotype": "DNA",
      "gc_percent": 34.0134,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.7242,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Macrotermes falciger (Giant African Fungus-Growing Termite)",
      "pct_identity_vs_centroid": 83.7242,
      "query_coverage_pct": 99.8214,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[E]",
      "sha256_prefix": "277fc6527fc8",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2986.7634,
      "super_blast_e_value": 1e-180,
      "tip_code": "E:T038"
    },
    {
      "accession": "NC_034027.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Macrotermitinae",
      "cleaned_sequence": "TGACGAGCCTGACTAAAGGATTATCGTGATAGGATAAAACATGTAGAGCAACCTCTACCATCATTACATCAGACGGAATTGAACCGTCACCACCAAGCATCAAAAGCTGACGTGCACAATACACCAAGATGTAAAAAAACAAAACCCCCCGTAGAAAAGTAAGCTAAACAAGCTAATGGGTTCATACCCCATAAATAGAGTAAACAACTCTCTTCTCTAATGCCCAATAATCCAACCAAAATCCTCTTATTAACCACCCTAGTAAGAGGTGTATTAGTGTCTGTATCCTCCAATTCATGACTAGGCGCATGAATAGGACTGGAAATCAACCTAATATCATTTATCCCATTGATATCCAACATCAAAAACATGTACAACACAGAAGCTTCATTAAAGTACTTTATCGTACAAGTATTAGCTTCAACAACACTGCTATTCATAGTAGTGATGAAAACATTAACAGAAGACTTATTCACCCTAGAAGGAACCGCATACACACCAATAATCATCTGTACCCCCCTCCTGCTAAAAAGTGGAGCCGCACCTCTCCACTGATGATTCCCAGGAGTAATGGAAGGACTAAGATGAGAAAATTGCGCATTACTAATAACAGTACAAAAAGCTTCCCCACTAATATTAATGTCCTACCTGATTGAAATTAACATTTTCACATTCAGAATCATCCTAATATCAACAATTGTAGGAGCGATTGGAGGACTCAACCAAACCTCAATGCGAAAAATCTTAACCTATTCATCTATTAACCACACCGGATGGATACTAATTGCATTGGCTCTAAGAGAAAACCTATGAACAGTATACTTCGCAGTCTACTCAACACTGGCAGTAACAGTCGTATCAGCCATTAAACTATCAGGAATCTCATTCATCAACCAAACCATAATAACAAACAAAGAAGCAACCCTGATAAAGTTCATAATATTCACATCACTACTCTCCTTAGGGGGACTACCACCATTCCTAGGGTTCCTACCAAAATGAGTCATTATCCAAGCAATAATTACAAACAGACTGGCCCCCATAGCAACAATCGTAGTAGTAACATCATTGATAACTCTATACTACTACCTAAAAATCTCCTACTCGAGATTTATAATCCTAAACACTGAGCCAAAATGAAATCTAAAGACCGCCAAAAGCAAGAAAGCAAGAAATATCAAAGCCCTAACACTGTCATCAATTTCCATGACAGGATTAGCAGCATGCACCATCATCGCCAACATTTACTAACTAGGACAAAGAAGGCCTTAAGTTAAGCAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTCCCTTTAGGCCTTGATAAGAATTAACTTACCCCCACAGAATTGCATTCTGTAATCACAAGATGAATACAAGGCCAACAAAACAATAGTGGAAAAGTAACGTAAACACTTCTGAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCACTCCACTAATCTTAACTCGATGACTCTTCTCAACCAATCACAAAGACATTGGAACACTATACTTCGTATTCGGAGCCTGATCAGGAATGGTTGGAACATCCCTAAGAATACTAATCCGAACAGAACTTGGACAACCAGGATCCCTAATCGGGGATGACCAGATCTACAATGTCATCGTCACAGCCCATGCCTTCGTCATGATTTTCTTCATGGTAATACCAATCATAATTGGAGGTTTCGGAAACTGATTGGTACCACTAATACTAGGAGCACCGGACATAGCATTTCCACGAATAAATAACATAAGATTCTGGCTCCTCCCACCATCACTAA",
      "detected_biotype": "DNA",
      "gc_percent": 36.6756,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.3511,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Odontotermes obesus (Indo-Gangetic Fungus-Growing Termite)",
      "pct_identity_vs_centroid": 83.3511,
      "query_coverage_pct": 99.6786,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[E]",
      "sha256_prefix": "755828da7a71",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2929.9572,
      "super_blast_e_value": 1e-180,
      "tip_code": "E:T039"
    },
    {
      "accession": "NC_034028.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Macrotermitinae",
      "cleaned_sequence": "TGACGAGCCTGACTAAAGGATTATCGTGATAGGATAAAACATGTAGAGCAACCTCTACCATCATTACACCAGACGGAATTGAACCGTCACCATCGAGCATCAAAAGCTAACGTGCACTATACACCAAGATGTAAAACAAAAACTAAACGTAGAAAAGTAAGCTAAACAAGCTAATGGGTTCATACCCCATAAATAGAGTAAACAACTCTCTTCTCTAATGCCCAATAATCCAACCAAAATCCTCTTACTAACCACCCTAGTAAGAGGTGTATTAGTGTCTGTATCCTCCAATTCATGACTAGGAGCATGAATTGGACTGGAAATCAACCTAATATCATTTATTCCACTGATATCCAACATCAAAAACATGTACAATACGGAAGCCTCATTAAAGTATTTCATTGTACAAGTACTAGCCTCAACGACATTGCTATTTATGGTAGTAATAAAAACATTAACAGAAGACTTATTCACCCTAGAAAGAACCGCATATACACCAATAATCATCTGTACCCCTCTCCTGCTAAAAAGTGGAGCCGCACCTCTCCACTGATGATTCCCAGGAGTAATGGAAGGACTAAGATGAGAAAATTGCGCATTACTAATAACAGTACAAAAAGCTTCCCCGCTAATACTAATGTCCTACCTGATTGAAATCAACATCTTCACATTCAGAATTATTTTAATATCAACAATCGTAGGAGCAATTGGAGGACTCAACCAAACCTCAATACGAAAGATCCTAACCTACTCATCTATTAATCACACTGGCTGAATATTAATTGCATTGGCCCTAAGAGAAAACCTGTGAACAGTATACTTCGCAGTATACTCAACACTAGCAGTGACAGTCGTATCAGCCATTAAACTATCTGGAATCTCATTCATCAACCAAACTATAATAACAAACAAGGAAGCAGCCTTGATAAAGTTTATAATATTCACATCACTACTATCCTTAGGAGGGCTGCCGCCATTCCTAGGATTCCTACCAAAATGAGTCGTTATCCAAGCAATAATCACAAATAGACTGGCCCCCATAGCAACAATCGTAGTAGTAACATCACTAATAACCTTATACTACTACCTAAAAATCTCCTACTCGAGATTCATAATCCTAAACACGGAGCCGAAATGAAACCTAAAAGCCCCCAGGAACAAAAAAGCAGGAAACATTAAAGCCCTAGCACTGTCATCAATCTCCATAACAGGATTAACAGCATGCACTGTCATCGCCAACATTTACTAACCAGGACAAAGAAAGAAGGCCTTAAGTTAAACAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTCCCTTTAGGCCTTGATAAGAACTAACTTACCCCCACAGAATTGCATTCTGTAATCACAAGATGAATACAAGGCCATAAAGCAATAGTGGAAAAGTAACGTAAACACTTCTGAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCACTCCACTAATCTTAACTCGATGACTCTTCTCAACCAATCACAAAGACATTGGAACACTATACTTCGTATTCGGAGCCTGATCAGGAATGGTCGGAACATCCCTAAGAATACTGATCCGAACAGAACTTGGACAACCAGGATCCCTAATCGGAGACGACCAGATCTATAATGTCATCGTCACAGCCCATGCCTTCGTCATAATCTTCTTCATGGTAATGCCAATCATAATTGGAGGCTTCGGAAACTGGTTAGTACCACTAATACTAGGAGCACCGGACATAGCATTTCCACGGATAAACAACATAAGATTCTGACTTCTACCACCATCACTA",
      "detected_biotype": "DNA",
      "gc_percent": 36.5151,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 82.6657,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Odontotermes hainanensis (South China Fungus-Comb Termite)",
      "pct_identity_vs_centroid": 82.6657,
      "query_coverage_pct": 99.7143,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[E]",
      "sha256_prefix": "8c32729b7589",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2856.9208,
      "super_blast_e_value": 1e-180,
      "tip_code": "E:T040"
    },
    {
      "accession": "NC_034024.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Macrotermitinae",
      "cleaned_sequence": "AATGATGAGCCTGACTAAAGGACTATCGTGATAGGATAAAACATGTAGCTAAAACTACCTTCATTACATCTAACAGAATCAAACCATCACCACCAAGCATCAAAAGCTGACGTGCACCATACACCAAGATGTAAAAAATAAAATCTAAACATAGAAAAGTAAGCTAATAAAGCTAATGGGTTCATACCCCATAAATAGAGTAAGCAACTCTCTTCTCTAATGCCCAGTAACCCAACCAAAATCCTCTTATTAACAACCTTAATAAGAGGTGTATTAGTATCTGTATCCTCCAATTCATGACTTGGCGCATGGATAGGTCTGGAAATCAATCTAATATCATTCATCCCACTAATATCTAACGTCAAAAATATGTACAATACAGAAGCCTCACTGAAATATTTCATTGTACAAGCGCTTGCCTCAGCGACACTACTATTCATAGTAGTAATAAAGACGTTAACAGAAAACTTATTCACCATAGAAGGAACCGCGTATACACCAATAATCATTTGCACCCCTCTCCTGCTAAAAAGTGGAGCCGCACCACTCCACTGATGATTCCCAGGAGTAATGGAAGGACTAAGATGAGAAAATTGCGCACTATTAATAACAGTACAAAAAGCCGCACCATTAATACTAATATCATACCTAATTGAAATTAATACTTTCACACTAAGAATTATTTTATTATCAACAATTGTAGGATCAATTGGAGGATTAAATCAAACCTCTATACGAAAAATCCTAACATACTCATCTATCAACCACACTGGATGAATACTAACCGCACTAGCCATTAGAGAAAATATATGAGTAGTATACTTCATAATCTATTCAACACTAGCACTTACAGTAGTGTCAGCTATTAAACTATCTGGAGTATCATTTATTAACCAAACCATAATAACAAACAAAGAGACTGTATTAATAAAATTCATAATATTTACATCATTACTATCCTTAGGTGGACTGCCGCCATTCTTAGGATTTCTACCAAAATGAATCGTTATCCAAGCAATAATCGCAAACAATATAGCCCCCCTAGCAACAATTGTAGTAGTAACATCATTAATTACCCTATACTACTACCTAAAAATCTCTTACTCAAGATTTATGATCTTGAACACAGAACCAAAATGGAACTTAAGATCTCACAAAAACAAGAAAACCAAAAACATCACAGCATTGTCCCTATCATCAATTTCCCTATTAGGAATAATAGCAAGCACGATCATAACCAACATCAACTAACTAAAATAAAGAAGGCCTTAAGTTAAACCAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAGGCACTATTCTCCCACCCCCATAGAATTGCATTCCATAATCACGAAACATGAATACAAGGCCACACAAACATAGTGGAAAAGTAACGTAAATACCCCTAAATAGATTTACAGCCTATCGCCTACTCATTTATCTCAGCCACTCCACTAATCTTCACCCGATGATTCTTCTCAACTAATCACAAAGATATTGGAACCCTATATTTCGTATTCGGAGCCTGATCAGGAATGGTTGGAACTTCTTTAAGAATACTAATCCGCACAGAACTAGGACAACCGGGATCCCTGATCGGAGATGATCAAATCTATAATGTCATTGTCACAGCTCACGCCTTCGTCATAATTTTCTTCATAGTAATACCAATTATAATTGGTGGATTCGGAAATTGACTAGTACCACTAATACTAGGAGCACCAGATATAGCATTCCCTCGAATAAACAACATAAGATTTTGACTACTACCACCATC",
      "detected_biotype": "DNA",
      "gc_percent": 33.4472,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 82.9614,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Pseudacanthotermes spiniger (Afrotropical Fungus-Gardening Termite)",
      "pct_identity_vs_centroid": 82.9614,
      "query_coverage_pct": 99.9286,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[E]",
      "sha256_prefix": "f8b907c9b251",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2891.1848,
      "super_blast_e_value": 1e-180,
      "tip_code": "E:T041"
    },
    {
      "accession": "NC_034072.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Macrotermitinae",
      "cleaned_sequence": "ATGGAGAGCCTGATTAAAGGATTATCGTGATAGGATAAAATATGTAGACTCAGTCTACCCTCATTACATCCAACAGAATCAAACTATCACCATCAAGCATCAAAAGCCAACGTGCACCATACACCAAGATGTAAAACTAAAACCTAAACGTAGAAAAGTAAGCTAAATAAGCTAATGGGTTCATACCCCATAAATAGAGTAAACAACTCTCTTCTCTGATGCCCAGCAACTCAACCAAAATCCTCTTACTAACCACTTTGGTAAGAGGTGTATTAGTATCTGTATCCTCCAATTCATGGCTCGGCGCATGAATGGGCCTGGAAATCAACCTAATATCCTTCATCCCCCTAATATCCAACGTCAAAAACATGTACAACACGGAAGCATCACTAAAATACTTCATTGTACAAGCACTAGCCTCAGCAACTCTACTATTCATGGTAGTGATAAAGACGCTAACGGAAGACTTATTTGCCCTAGAAGGAACCGCATACACACCAATAATCATCTGCACCCCCCTCCTGTTAAAAAGTGGAGCCGCACCACTCCACTGATGATTCCCAGGAGTAATAGAAGGATTAAGATGGGAAAATTGCGCATTACTAATGACAGTACAAAAGGCTGCCCCACTAATACTACTGTCATACCTAATCGAGATCAACACTTTTACACTAAGAATTATTTTAACATCAACAATCGTAGGAGCAATCGGAGGGTTAAACCAAACCTCCATGCGAAAGATCCTAACCTACTCATCAATCAACCACACCGGCTGAATGCTAATTGCACTAACCCTAAGAGAAAACTTATGAATAGTGTACTTCCTAATTTACTCAACCCTAGCACTAACAGTTGTGTCCGCCATTAAACTATCCGGAGTATCATTCATCAACCAAACCATAATAACAAACAGGGAAGCCACCTTAATGAAATTCATGATATTCACATCCCTGCTATCCCTAGGCGGATTGCCACCATTCCTAGGATTCCTGCCAAAATGAATCATCATCCAAGCCATAATTACAAACAGACTAGTCCCCCTAGCAACAATTGTAGTAGTAACATCCCTAATCACCCTATACTACTACCTAAAAATCTCTTACTCAAGATTTATAATCTTAAACACAGAGCCAAAGTGGAACTTAAGTTCCCACAAAACCAAGAAATCAAGAAGCACCAAAGCACTACTCCTATCATCAATTTCCATAGCAGGGATAGCGGCATGCACTATCATCGCAAACATCAACTAAAATAAAGACCAAGGCCTTAAGTTAAACAAACTAATAACCTTCAAAGCTATCAATAAAGGGTTACCTTTAGGCCTTGGTAAGAACTCAACTCACCCCTATAGAATTGCATTCTATAATCACAAAATGAATACAAGGCCACAAACACAATAGTGGAAAAGTAACGTAAACACTTCTAAATAGATTTACAGCCTATCGCCTACTCATTAATCTCAGCCACTCCACTAATCTTCACCCGATGATTCTTCTCAACTAATCACAAAGACATTGGAACACTATACTTCGTGTTTGGAGCATGATCAGGAATAGTTGGCACATCCCTAAGAATACTGATCCGAACAGAACTTGGACAGCCCGGATCCCTAATTGGAGACGACCAAATCTACAACGTTATTGTCACAGCCCATGCCTTCGTCATAATTTTCTTCATAGTTATGCCAATTATAATTGGGGGATTTGGAAACTGACTGGTACCACTCATACTAGGAGCGCCAGACATGGCATTCCCCCGAATGAACAACATGAGATTCTGGCTCCTCCCGCCATCACTTAC",
      "detected_biotype": "DNA",
      "gc_percent": 36.1374,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.5587,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Microtermes obesi (Subterranean Mini-Comb Fungus Termite)",
      "pct_identity_vs_centroid": 83.5587,
      "query_coverage_pct": 99.4643,
      "raw_length_bp": 14907,
      "replacement_for_accession": null,
      "sector_code": "[E]",
      "sha256_prefix": "042c70fec8dc",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2957.0078,
      "super_blast_e_value": 1e-180,
      "tip_code": "E:T042"
    },
    {
      "accession": "PV077928.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "QUARANTINED_NUMT",
      "chimera_5p_3p_delta_pct": 1.8,
      "clade_group": "Termitidae Termitinae",
      "cleaned_sequence": "",
      "detected_biotype": "DNA",
      "gc_percent": 34.7621,
      "included_in_cleaned_cohort": false,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 2,
      "locus": "Mitochondrial Genome (UNVERIFIED)",
      "nearest_neighbor_accession": "NC_039398.1",
      "nearest_neighbor_identity_pct": 81.6183,
      "nearest_neighbor_taxon": "Pericapritermes nitobei (Asymmetric-Snapping Mandible Termite)",
      "organism": "Anoplotermes nr. distans isolate 1574 (UNVERIFIED GenBank)",
      "pct_identity_vs_centroid": 81.6183,
      "query_coverage_pct": 99.4167,
      "raw_length_bp": 15281,
      "replacement_for_accession": null,
      "sector_code": "[F]",
      "sha256_prefix": "181b08cfe564",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2324.0253,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T043"
    },
    {
      "accession": "NC_039398.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Termitinae",
      "cleaned_sequence": "TGATGAGCCTGACTAAAGGACTATCGTGATAGGATAAAATATGTAGTAATAAAACTACCTTCATTACATCTAACAGAATTAAACTATCACCATCAAGCATCAAAAGCCGCCGTGCACCATACACCAAGATGTAAAAATAAACATCAACATAGAAAAGTAAGCTAATTTAAGCTAATGGGTTCATACCCCATATATAGAGTTTAACACTCTCTTCTCTAATGCCCAGCAACTCAACAAAAGTCCTCTTACTATTAACCCTAGTAGGTGGTATATTAGTGTCTGTATCCTCCAATTCATGACTAGGAGCATGAATAGGTGTGGAAATCAACCTAATATCATTTATCCCTTTAATGTCCAATGTCCACAATATGTACAATACAGAAGCCTCACTAAGGTATTTCATTGTACAAGTCCTCGCCTCAGCAACGCTACTATTTCTAGTAGTAATAAAGGCATTAATAGAGGATTTATTCACATTTGAAATAAGTCCTTACACACCAGTGATTATCAGCACACCCTTACTGCTGAAAAGAGGAGCTGCCCCATTTCACTGATGATTTCCAGGAGTTATGGAAGGTTTAAGATGAGAAAACTGTATATTACTAATAACACTACAAAAAGCTGCCCCCTTGATATTAATTTCATACCTGGTTGAGATCAACATATTTACATTAAGAATCATCCTGATGTCAACAATCGTAGGGGCAATTGGTGGATTAAATCAAAACTCCATACGAAAAATCTTAACATACTCATCCATCAACCACACCGGTTGAATATTAATTGCATTAACCACAAGAGAAAATTTATGATTAGTATATTTCATAATTTACTCAACACTGACCTTAGCAGCAGTTTCAGCCATTAAACTATCTGGAGTCTCGTTTATTAATCAAACTATAATAACGAACAAAGAAACAGCATTAACGAAATTCATAATATTTACATCCCTCTTATCCTTGGGTGGTCTTCTGCCGTTCCTTGGTTTCCTGCCTAAATGAATTGTTATTCAAGCAATGGTTATAAACAATATAGTTCCACTTGCTACAGTTGCAGTCTTAACATCATTAATTACCCTGTACTATTACCTAAAAATTTCTTACTCAAGATTCCTAATCCTAAACGCAGAACCAAAATGAAATCTTAAGGCAAACAAAAACAAAATAACCGTAAACATCAGAGCATTAATTTTGTCATCAATTTCCTTGATAGGTCTAGCCGTATGCACAATCGTAATTAACATTAACTAAAGGCCTTAAGTTAAGTACAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTCCTTATAACTCACCCCTACAGAATTGCATTCTATAATCACACAATGAATACAAGGCTCACGTAAGATAGTGGAAGAGCAACGTAAACGCTCCTAAATAGATTTACAGCCTATCGCCTACTTATTATTCTCAGCCATCCCACTAATTTTCACCCGTTGATTCTTCTCAACTAATCACAAAGACATTGGAACATTATACTTCGTATTCGGAGCCTGATCAGGAATGGTCGGAACTTCACTAAGAATACTTATTCGAACAGAACTAGGACAACCAGGATCCTTAATTGGAGATGATCAAATCTACAACGTCATTGTAACAGCTCACGCCTTCGTTATAATTTTCTTCATAGTTATACCAATCATAATTGGTGGGTTCGGAAATTGATTAGTGCCCCTAATACTATGAGCACCGGACATAGCCTTCCCACGAATAAACAACATGAGTTTTTGACTACTACCACCCTCATTAACTCTATTAC",
      "detected_biotype": "DNA",
      "gc_percent": 32.5079,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 81.7664,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Pericapritermes nitobei (Asymmetric-Snapping Mandible Termite)",
      "pct_identity_vs_centroid": 81.7664,
      "query_coverage_pct": 99.4286,
      "raw_length_bp": 15224,
      "replacement_for_accession": "PV077928.1",
      "sector_code": "[F]",
      "sha256_prefix": "b1bd7b495376",
      "source_origin": "ReserveReplacement",
      "strand_orientation": "+",
      "super_blast_bit_score": 2733.39,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T043"
    },
    {
      "accession": "NC_034049.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Termitinae",
      "cleaned_sequence": "AATGATGAGCCTGACTAAAGGACTATCGTGATAGGATAAAACATGTAGTTAAAACTACCTTCATTACATCCAACAGAATCAAACTATCACCAGCAAGCATCAAAAGCCGCCGTGCACCATACACCAAGATGTAATAAACAACCTTCAACATAGAAAAGTAAGCTAAATAAAGCTAATGGGTTCATACCCCATAAATAGAGTATAACACTCTCTTCTCTAATGCCCAATAACTCAACCAAAATCCTCTTGCTAACTACCTTAGTAGGAGGTGTATTAGTATCTGTATCCTCTAATTCATGACTCGGGGCATGAATAGGGTTGGAGATTAATCTAATATCATTCATCCCCCTGATGTCCAATGTTAAAAACATGTACAATACAGAGGCATCATTAAAGTACTTCATTGTACAAGTACTTGCCTCAGCAACACTCCTATTTATAGTAGTGATAAAAACATTAACGGAAGATTTATTCACATTCGAAAGAAACACATATACACCAATAATCATCTGTACCCCCCTGCTGTTAAAAAGTGGAGCCGCACCCTTTCACTGATGATTCCCAGGAGTAATAGAAGGTCTAAGATGAGAAAACTGTGCACTATTAATAACTGTGCAAAAAGCCGCCCCGCTGATATTAATATCATACCTGATTGATATCAACACTTTCACACTAAGAATTATTTTGATGTCCGCAATCGTAGGATCAATTGGAGGATTAAACCAAACCTCAATACGAAAAATCCTAACCTACTCATCCATCAACCACACCGGCTGAATACTAATTGCACTAGCCACAAGTGAAAACCTATGAATAGTGTATTATGTGATCTATTCAACCCTAGCACTAACCGTGGTATCAGCCATTAAGTTGTCCGGAGCCTCATTTATTAACCAAACCATAATAACAAATAAAGAAACCACACTGATAAAATTCATATTATTCACATCACTATTATCTTTGGGGGGGCTTCCACCATTCCTTGGGTTCCTACCAAAATGAATTGTTATTCAAGCCATAATTACAAACAACATAGCACCATTAGCAACAGTGGTAGTAGTAACATCACTAATCACCTTGTACTACTATCTAAAAATTTCCTACTCAAGATTCATAATCCTAAACACAGAGCCCAAGTGAAACCTAAAGTCAAATAAAAACAAAGCAATTAAAAATATTTGAGCACTAACTCTATCATCAATCTCCCTAATAGGAATAGCAGCTTGCACAATTATCACTAACATCAACTAATTGTAAGGCCTTAAGTTAATATACAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTACCTTTAGGCCTTGGTAAGTCCAACTCACCCCTACAGAATTGCATTCTGTAATCACAAAATGAATACAAGACCTATAATAGTGGAAGAGCAACGTAAATGCCCCTAAATAGATTTACAGCCTATCGCCTACTAATTGTTCTCAGCCATCCCACTAATTTTCACCCGATGATTTTTCTCAACTAATCACAAGGACATTGGAACATTATATTTTGTATTTGGAGCTTGATCAGGAATAGTAGGAACTTCTCTAAGTATACTTATTCGCACAGAATTAGGACAACCCGGCTCTTTAATTGGAGATGATCAAATTTACAACGTCATTGTCACAGCCCACGCATTCGTTATAATTTTCTTCATAGTTATACCAATCATGATTGGTGGATTTGGAAACTGATTAGTCCCACTAATACTAGGAGCCCCAGACATAGCATTCCCACGAATAAACAATATAAGCTTTTGATTATTACCTCCCTCACTAACACTACTATT",
      "detected_biotype": "DNA",
      "gc_percent": 34.2408,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.28,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Termes fatalis (Neotropical Humivorous Snapping-Mandible Termite)",
      "pct_identity_vs_centroid": 83.28,
      "query_coverage_pct": 99.3214,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[F]",
      "sha256_prefix": "ce0cf8dd9565",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2928.1539,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T044"
    },
    {
      "accession": "NC_034142.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Termitinae",
      "cleaned_sequence": "AATGTTGAGCCTGACTAAAGGACTATCGTGATAGGATAAAATATGTAATTAAAATTACCTTCATTACATCCAACAGAATCAAACTATCTCCTTCAAGCATCAAAAGCCACCGTGCACCATACACCAAGATGTAAAAAATCAGCCTCACCACAGAAAAGTAAGCTAAAACAAGCTAATGGGTTCATACCCCATAAATAGAGTCTAATACTCTCTTCTCTGATGCCCAACAACTCAACAAAAATCCTCTTACTAACTACCTTGGTAGGGGGTATATTAATATCTGTATCCTCTAATTCATGGCTAGGAGCATGAATAGGATTAGAAATTAATTTAATATCATTCATCCCATTAATATCTAGTGTCAAAAATATGTACAATACAGAAGCCTCACTAAAATACTTTATTGTACAAGTTCTTGCCTCAGCAACGCTACTGTTCATAGTAGTAATAAAGACGTTAACGGAGGATTTGTTCACATTCGAAATCAGCCCATATACACCAATGATCATCTGTACCCCTCTCCTACTCAAAAGTGGAGCCGCACCTCTCCACTGATGATTCCCAGGAGTAATGGAAGGATTAAGATGAGAAAACTGTGCACTATTAATAACAGTGCAAAAAGCCGCCCCATTGATATTAATATCATACCTGATTGAAATCAATGTATTCACACTAAGAATTATTTTATTATCCACAATTGTAGGATCAATTGGGGGTTTAAACCAAACTTCAATACGAAAAATTCTAACCTACTCATCTATCAACCACACTGGTTGAATACTAATTGCATTAACCACAAGAGAAAGTTTGTGGTTAGTATACTTCATAATTTACTCAACACTAGCATTAACTGTAGTGTCAGCTATTAATCTATCCGGAATATCATTTATCAACCAAACCATAATAACAAATAAAAATACCACATTAATAAAATTTATAATATTTACATCCCTACTATCCCTGGGCGGGCTCCCTCCATTCCTTGGATTCCTGCCAAAGTGAATTGTTATCCAAGGAATAATTGCAAACAACATGGCTCCACTAGCAACAGTTGTAGTAGTAACATCATTAATCACTCTGTATTACTACCTAAAAATCTCCTACTCAAGCTTTATAATTTTAAATACAGAACCAAAATGAAACCTAAAACCTCACAAAAACAAAACAAACAAAAACATTAGTGCAATAATTTTATCATCAATCTCCTTAACAGGTATAGCAGCTTGCACAATTATTTCCAACATCAACTAAAAGGCCTTAAGTTAAGCATTAAACTAATAACCTTCAAAGCTATAAATAAAGGGTCTATCCTTTAGGCCTTGATAAGTCCTTTAACCTACCCCTATAGAATTGCATTCTACAATCACAAAATGAATACAAGGCCTAAATAGTGGAAGAGCAACGTAAATGCCCCTAAATAGATTTACAGCCTATCGCCTACTTATTATTCTCAGCCATCCCACTAATTTTCACCCGTTGATTCTTCTCAACTAATCACAAAGACATTGGAACACTATACTTCCTATTCGGAGCCTGATCAGGTATGGTCGGAACTTCCCTAAGAATACTTATTCGAACAGAACTAGGACAACCAGGATCCTTAATTGGAGATGACCAAATCTATAACGTTATCGTCACAGCCCATGCTTTCGTTATAATTTTCTTTATAGTTATGCCAATCATGATTGGTGGGTTCGGAAACTGATTGGTACCACTAATATTAGGAGCACCAGACATGGCCTTTCCACGAATAAACAACATAAGATTTTGACTTCTCCCTCCATCATTAACCTTACTACT",
      "detected_biotype": "DNA",
      "gc_percent": 32.8027,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 82.7831,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Microcerotermes serrula (Arboreal Carton-Nest Wood Termite)",
      "pct_identity_vs_centroid": 82.7831,
      "query_coverage_pct": 99.3214,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[F]",
      "sha256_prefix": "fada713d5fe0",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2860.5275,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T045"
    },
    {
      "accession": "NC_034053.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Termitinae",
      "cleaned_sequence": "AATGATGAGCCTGATTAAAGGACTATCGTGATAGGATAAAACATGTAGTTAAAACTACCTTCATTACATCTAACAGAATCAAACTATTACCATCAAGCATCAAAAGCCGACGTGCACCATACACCAAGATATAAAAATAAAAGCTAAACATAGAAAAGTAAGCTAAATAAGCTAATGGGTTCATACCCCATAAATAGAGTAAATACTCTCTTCTCTAGTGCCAAGAAATTCAACAAAAATCCTTTTATTGACTACTTTAGTAGGGGGTATATTAGTATCTGTATCCTCTAACTCATGACTTGGGGCATGAATAGGATTGGAAATCAACTTAATATCATTTATCCCTTTAATATCTAACGTCAAAAACATGTACAACACGGAAGCATCACTAAAATATTTCATTGTACAAGTACTTGCTTCAGCAACACTACTATTCATAGTAGTAATAAAAACTCTAACAGAGGATTTTTTCACATTTGAAAGAAATCCATATACACCAATAATCATTTGTACCCCTCTCCTGTTAAAAAGTGGAGCCGCTCCCCTTCACTGATGGTTCCCAGGAGTAATAGAGGGATTAAGATGAGAAAACTGTGCACTATTAATAACAGTGCAAAAAGCCGCCCCATTGATATTAATATCATACCTGATTGAAATCAATGCCTTCACGTCAAGAATCATTTTGATATCTACAATTGTGGGATCAATTGGAGGACTAAATCAAACTTCAATACGTAAGATCTTGACCTATTCATCAATCAACCACACTGGTTGAATATTGATTGCACTAACCACAAGAGAAAATTTATGGTTGGTATACTTTATGATTTATTCAACTCTAACGTTAACTGTAGTATCAGCTATTAAGTTATCTGGAGCATCATTTATCAATCAAACCATAATAACAAATAAAGAATCCACACTAATAAAATTTTTAATATTTACATCATTATTATCCTTAGGTGGGCTACCACCATTCCTTGGATTTTTACCGAAGTGAATCATTATTCAAGCAATAATTATAAATAACATAACCCCACTAGCAACCGCTGTAGTAGTAACATCATTAATTACGTTATACTACTACCTAAAAATCTCCTACTCAAGATTCATAATCTTAAATACCGAACCAAAATGAAATTTAAGAATATACAAAAACAAATCAACCAAAAACATAAGCGCAATAATCTTAACATCAATCTCCCTAACAGGAATGGCAGTATGTACAATTATCTCCAACATTAGCTAAACATAAGGCCTTAAGTTAAATTAAACTAATAACCTTCAAAGCTATAAATAAAGGGTTATCCTTTAGGCCTTGGTAAGTCCTTTCAACTAACCCCTACAGAATTGCATTCTATAATCACAAAATGAATACAAGGCCCCGTAAATAGTGGAAGAGCGACGTAAACGCCCCTAAATAGATTTACAGCCTATCGCCTACTTATTTTTCTCAGCCATCCCACTAATTTTCACCCGATGATTTTTCTCAACTAATCACAAAGACATTGGAACACTATACTTCGTATTCGGAGCCTGATCAGGAATGGTCGGAACTTCCCTAAGAATACTTATTCGAACAGAACTAGGACAACCAGGATCACTAATCGGAGATGACCAAATCTATAACGTTATTGTAACAGCCCACGCTTTCGTTATGATTTTCTTCATGGTTATGCCAATCATAATTGGAGGATTCGGAAACTGATTAGTGCCATTAATACTAGGAGCACCAGATATAGCATTCCCACGAATAAATAATATAAGTTTTTGACTTCTTCCTCCATCATTAACTTTACT",
      "detected_biotype": "DNA",
      "gc_percent": 31.699,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.357,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Neocapritermes angusticeps (Neotropical Copper-Luciferase Soldier Termite)",
      "pct_identity_vs_centroid": 83.357,
      "query_coverage_pct": 99.5,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[F]",
      "sha256_prefix": "da0fd8770b5c",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2935.3673,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T046"
    },
    {
      "accession": "PV077920.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "QUARANTINED_NUMT",
      "chimera_5p_3p_delta_pct": 1.8,
      "clade_group": "Termitidae Termitinae",
      "cleaned_sequence": "",
      "detected_biotype": "DNA",
      "gc_percent": 31.2993,
      "included_in_cleaned_cohort": false,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 2,
      "locus": "Mitochondrial Genome (UNVERIFIED)",
      "nearest_neighbor_accession": "NC_034124.1",
      "nearest_neighbor_identity_pct": 83.6574,
      "nearest_neighbor_taxon": "Amitermes obeuntis (Magnetic/Meridional Mound Lineage)",
      "organism": "Neocapritermes talpoides isolate 154 (UNVERIFIED GenBank)",
      "pct_identity_vs_centroid": 83.6574,
      "query_coverage_pct": 99.5417,
      "raw_length_bp": 15208,
      "replacement_for_accession": null,
      "sector_code": "[F]",
      "sha256_prefix": "8487838e9d4c",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2546.7414,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T047"
    },
    {
      "accession": "NC_034124.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Termitinae",
      "cleaned_sequence": "AATGATGAGCCTGACTAAAGGACTATCGTGATAGGATAAAACATGTAGTTAAAACTACCTTCATTACATCTAACAGAATCAAACTATCACCATCAAGCATCAAAAGCCACCGTGCACCATACACCAAGATGTAAACAAAAATGTTTCAATATAGAAAAGTAAGCTAAATTAAGCTAATGGGTTCATACCCCATATATAGAGTTTAACACTCTCTTCTCTAATGCCCAATAATTCAACTAAAGTCCTCTTGCTGATTACCCTAGTAAGAGGTATATTAGTATCTGTATCCTCCAATTCATGACTCGGAGCATGAATAGGTCTGGAGATCAATCTAATATCGTTTATCCCTTTAATGTCCAACGTCAAAAATATATACAACACGGAAGCTTCATTAAAGTACTTCATTGTACAAGTCCTCGCCTCAGCGACATTACTATTCATAGTGGTAATGAAAACATTAACAGAAGATCTATTTACATTTGAGAGAAGTATATATACACCAATAATCATTTGTACCCCCCTGCTACTAAAAAGTGGTGCTGCCCCCTTCCACTGATGATTCCCAGGAGTAATAGAAGGGTTAAGATGAGAAAACTGCGCACTATTAATAACAGTGCAAAAAGCTGCTCCATTAATATTAATGTCATACTTGATTGATATTAATGCATTTACACTAAGAATTATCCTAATGTCTACAATTGTAGGAGCAATTGGGGGTATAAACCAAACCTCAATACGAAAAATTATAACCTACTCATCAATTAATCACACCGGATGAATATTAATCGCATTAACTACAAGAGAAAATTTATGAATAGTGTACTTTATAATTTACTCGACCCTAGCATTAACAGTAGTATCAGCAATCAAACTATCCGGTGCATCATTTATTAATCAAACTATAATAACAAACAAGGAAACCAAACTAATTAAATTTATAATATTCACATCCCTACTATCTTTAGGTGGGCTACCACCATTCCTAGGGTTTTTACCAAAATGAATTGTCATCCAAGCCATAATTGCAAACAACATAGCTCCATTAGCAACTATTGTTGTAGTAACTTCACTAATTACCTTATACTACTATTTAAAAATTTCCTACTCAAGATTTATAATCCTGAGAACAGAACCAAAGTGAAATATAAGAATCCATAAAAATACCCCAACCAAAAATATCAGAGCATTAATTCTTTCATCAATCTCCTTATTAGGGATAGCAGCCTGCACAATCATCACCAACATTAATTAATTATAAGGCCTTAAGTTAAAACAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTACCTTTAGGCCTTGGTAAGTCCTTTAACTCACCCCTACAGAATTGCATTCTATAATCACAAAATGAATACAAGGCTCACGAAATAGTGGAAGAGTGACGTAAACACTCCTAAATAGATTTACAGCCTATCGCCTACTTATTATTCTCAGCCATCCCACTAATTTTCACCCGATGATTTTTCTCAACTAATCATAAGGACATTGGAACACTATACTTCGTATTTGGAGCTTGATCAGGAATGGTCGGAACCTCTCTAAGAATACTTATCCGAACAGAATTAGGACAACCAGGATCTTTAATTGGGGATGATCAAATCTACAACGTTATTGTTACAGCCCATGCATTTGTTATAATCTTCTTCATAGTTATACCAATCTTAATTGGAGGATTCGGAAACTGACTAGTACCACTAATACTTGGAGCACCAGATATAGCATTTCCACGAATAAACAACATAAGATTTTGATTATTACCCCCATCATTAACCCTGC",
      "detected_biotype": "DNA",
      "gc_percent": 32.0115,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.4164,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Amitermes obeuntis (Magnetic/Meridional Mound Lineage)",
      "pct_identity_vs_centroid": 83.4164,
      "query_coverage_pct": 99.4643,
      "raw_length_bp": 14949,
      "replacement_for_accession": "PV077920.1",
      "sector_code": "[F]",
      "sha256_prefix": "79cb9924e0a8",
      "source_origin": "ReserveReplacement",
      "strand_orientation": "+",
      "super_blast_bit_score": 2936.269,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T047"
    },
    {
      "accession": "NC_034139.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Termitinae",
      "cleaned_sequence": "AATGATGAGCCTGACTAAAGGACTATCGTGATAGGATAAAACATGTAGTAAAAGCTACCTTCATTACATCTAACAGAATCAAACTATCACCATCAAGCATCAAAAGCCACCGTGCACCATACACCAAGATGTAAAAAACAAGTTTAAACATAGAAAAGTAAGCTAAAATAAGCTAATGGGTTCATACCCCATAAATAGAGTTTAACACTCTCTTCTCTAATGCCCAGTAACTCAACCAAAATCCTCCTGCTAACTACCTTAGTAGGGGGTGTATTAGTATCTGTATCCTCTAATTCATGGTTTGGAGCATGAATAGGCCTGGAAATCAATCTAATATCATTTATTCCCCTAATGTCCAACGTCAAAAACATGTACAATACAGAAGCCTCATTAAAGTACTTCATTGTGCAAGTCCTTGCCTCAGCAACACTGCTATTTATAGTAGTAATAAAAACACTGACAGAGGATTTATTTACATTCGATAGAAACCCCTACACACCTATAATCATTTGTACCCCTCTCCTGCTAAAAAGTGGAGCAGCACCCTTCCACTGATGATTCCCAGGAGTAATAGAGGGATTAAGATGAGAAAACTGTGCACTGCTAATAACAGTGCAAAAAGCCGCCCCATTAATATTAATATCGTACCTGATTGAAATTAATATTTTTACACTAAGAATTATTATAATATCCACAATCGTAGGATCAATTGGAGGGTTAAATCAAACCTCCATACGAAAGATCTTAACTTATTCATCCATCAACCACACTGGATGAATATTAATTGCACTAACCACAAGAGAAAACTTATGGATAGTATACTTTGCAATCTACTCAACTCTAGCACTAACAGTTGTATCAGCCATTAAACTATCTGGAGTATCATTCATCAACCAAACCATAATAACAAACAAAGAAGCCACACTAATGAAATTCATGATATTCACATCACTTCTATCCTTAGGAGGTCTACCCCCTTTCCTCGGATTTCTACCAAAATGAATTGTCATTCAAGCCATAATCATAAACAACATGGCCCCCTTAGCAACAATCGTGGTAGTAACATCATTAATTACCCTATACTACTACCTAAAAATCTCCTATTCGAGATTTTTAATCTTAAACACAGAGCCAAAATGAAATCTAAAGTCTCATAAAAACAGCTCAGCCAAAAACATTGCGGCACTAACCCTGTCATCAATTTCCCTGACAGGAATAATAGCTTGTACTATCATCGCCAATATCAACTAACCGGAAATTGATGAAGGCCTTAAGTTAAATAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTCCTTCAACTCACCCCTACAGAATTGCATTCTATAATCACAAAATGAATACAAGGCTCTTAAGAAATAGTGGAAGAGCAACGTAAACGCTCCTAAATAGATTTACAGCCTATCGCCTACTTATTATTCTCAGCCACCCCACTAATCTTCACCCGTTGATTTTTCTCAACTAATCACAAAGACATTGGAACACTGTATTTTGTATTCGGAGCCTGATCAGGAATGGTCGGAACTTCTCTAAGAATGCTTATTCGAACAGAACTAGGACAACCAGGATCTTTAATCGGAGATGACCAAATCTACAACGTCATTGTCACAGCCCATGCTTTTGTTATAATTTTCTTCATGGTTATACCAATCATGATTGGTGGGTTCGGTAATTGATTAGTACCCCTAATGCTAGGAGCACCCGATATAGCATTCCCACGAATAAACAACATAAGATTTTGACTCTTACCTCCATCAC",
      "detected_biotype": "DNA",
      "gc_percent": 34.9097,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.357,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Globitermes sulphureus (Southeast Asian Autothysis Termite)",
      "pct_identity_vs_centroid": 83.357,
      "query_coverage_pct": 99.7857,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[F]",
      "sha256_prefix": "c0b90c640050",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2939.8758,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T048"
    },
    {
      "accession": "NC_085621.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Termitinae",
      "cleaned_sequence": "ATGATGAGCCTGACTTAAAGGACTATCGTGATAGGATAAAACATGTAGTTAAAACTACCTTCATTACATCTAACAGAATCAAACTATCACCGGCAAGCATCAAAAGCCACCGTGCACCATACACCAAGATGTAAAAATAAACCTCAAAATAGAAAAGTAAGCTAAATAAAGCTAATGGGTTCATACCCCATAAATAGAGTCAAAACTCTCTTCTCTAATGCCCAGTAACTCAACAAAAATCCTCCTACTAACTACCCTAGTAGGGGGTATATTAGTATCTGTGTCCTCCAATTCATGACTAGGAGCATGAATAGGTCTGGAAATCAATCTAATATCATTTATCCCTCTAATATCTAACGTCAAAAACATGTACAACACAGAAGCCTCACTAAAATACTTCATTGTACAAGTATTAGCCTCAGCAACACTACTATTTATGGTAGTGATAAAGACGTTAGCAGAGGATCTATTTACATTCGAAAGAAATCTATACACACCAATAATCATCTGTACCCCCCTGATGCTAAAAAGTGGAGCAGCACCCCTCCACTGATGGTTCCCAGGAGTAATAGAAGGGCTGAGATGAGAAAACTGTGCACTATTAATAACAGTGCAAAAAGCCGCCCCATTGATGTTAATATCGTACCTGATTGAAATCAATACTTTCACATTAAGAATTATTTTAATATCCGCAATTGTAGGAGCAATTGGAGGTCTAAATCAAACCTCAATACGAAAAATCCTAACTTATTCGTCCATTAACCACACTGGATGAATACTAATTGCACTAGCTACGAGAGAAAACTTGTGAATAGTGTACTTCGTGATCTATTCAACCCTAGCACTAACAGTAGTATCAGCCATTAAATTATCCGGAACATCCTTCATTAACCAAACCATAATGATAAATAAGGAAGCTGCACTAATAAAATTCATAATATTTACATCGCTACTATCATTGGGCGGGCTTCCCCCGTTCCTCGGGTTCCTACCTAAATGAATTGTTATCCAAGCCATAGTCGCAAACAATATAGCTCCCCTAGCAACCGCCGTAGTAGTTACATCATTAATCACACTTTACTACTACCTGAAAATCTCCTACACAAGATTTATAATCCTAAACACAGAGCCAAAATGAAACTTGAAATTTCACAAAAATAAAACAACTAAAAACATCAGAGCACTAATTTTATCATCAATTTCCCTAATAGGGATAGCAGCTTGCACAATCATTACCAACATCAATTAATGAAGGCCTTAAGTTAAACAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTCTTCAACTCACCCCTACAGAATTGCATTCTATAATCACAAAATGAATACAAGGCTTAACCTAAATAGTGGAAGAGCAACGTTAAAGCCCCTGAATAGATTTACAGCCTATCGCCTACTTATTATTCTCAGCCACTCCACTAATTTTCACCCGATGGTTCTTCTCAACTAATCACAAAGACATTGGAACACTATATTTTGTTTTCGGAGCTTGATCAGGAATAGTAGGAACATCCTTAAGTATACTTATCCGGACAGAGCTGGGGCAACCAGGATCATTAATCGGAGATGACCAAATCTACAACGTCATCGTCACAGCTCACGCCTTCGTCATAATTTTCTTCATAGTCATACCAATCATAATTGGTGGCTTTGGAAACTGACTAGTACCACTAATGCTAGGAGCACCAGATATAGCATTCCCACGAATAAACAACATAAGATTTTGATTATTACCGCCATCTCTAACACTACTACTT",
      "detected_biotype": "DNA",
      "gc_percent": 34.9049,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.4284,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Forficulitermes planifrons (Afrotropical Soil-Feeding Termite)",
      "pct_identity_vs_centroid": 83.4284,
      "query_coverage_pct": 99.2857,
      "raw_length_bp": 15356,
      "replacement_for_accession": null,
      "sector_code": "[F]",
      "sha256_prefix": "c3d93cc2608f",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2937.1707,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T049"
    },
    {
      "accession": "NC_034097.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Termitinae",
      "cleaned_sequence": "ATGATGAGCCTGACTAAAGGACTATCGTGATAGGATAAAATATGTAGTATAAAACTACCTTCATTACATCCAACAGAATCAAACTATCACCAGTAAGCATCAAAAGCCACCGTGCACCATACACCAAGATGTAACAATAAATTTCAATGTAGAAAAGTAAGCTAACCTAAGCTAATGGGTTCATACCCCATAAATAGAGTATACCACTCTCTTCTCTAATGCCCAGTAACTCAACAAAAATCCTCCTACTAATTACTTTAGTGGGGGGTATATTAGTATCCGTGTCCTCTAATTCATGACTTGGGGCATGAATAGGGTTGGAGATCAATCTAATATCATTTATCCCCTTAATATCCAACGTCAAAAACATGTATAATACAGAAGCCTCATTAAAGTACTTTATTGTTCAAGTACTTGCTTCGGCAACACTACTATTCTTAGTGGTAATAAAAACATTGACGGAGGATTTGTTCACATTCGAAATAAGTTCATATACACCAATAATCATCTGTACCCCTCTCCTGTTAAAAAGTGGAGCTGCCCCCCTTCACTGATGATTCCCAGGAGTTATAGAAGGTCTAAGATGAGAAAACTGTGCACTGCTAATAACAGTGCAAAAAGCTGCCCCGCTGATATTAATATCTTACCTGATTGACATTAATATCTTCACGCTAAGAATTATTCTGATATCTACAATTGTAGGAGCAATTGGAGGATTAAACCAAACTTCAATACGAAAAATCCTAACATATTCATCCATTAACCACACTGGTTGAATATTAATTGCATTAATCACAAGAGAAAGCATATGAATAATATACTACGTGATTTACTCAATCCTAGCACTAACCGTAGTGTCAGCCATTAAAGTATCCGGTGTCTCATTTATCAACCAGACAATAATAACAAACAAGGAAATTACACTGATAAAATTTATACTATTTACATCACTTCTATCTTTAGGTGGGCTCCCACCATTCCTTGGATTTCTTCCAAAATGGATTGTTATCCAAGCCATAATTACAAACAACATAGCCCCCCTAGCGACCGTTGTGGTAGTAACATCCCTAATTACCTTATACTACTATTTAAAAATCTCCTACTCGAGATTTTTAATCCTAAGAACAGAACCAAAATGAAACTTAAAGTTCCAGAAAAATAAATTGATCAAAATTATTGGAGTAATAATCTTATCATCAATCTCCCTAATGGGAGTGGTATCCTGCACTATCATTACCAACATCAACTAAATTAAAGGCCTTAAGTTAAACTTAAACTAATAACCTTCAAAGCTATAAATAAAGGGTTTCCTTTAGGCCTTGGTAAGTCCTTCAACTCACCCCTACAGAATTGCATTCTATAATCACAAAATGAATACAAGGCTTATTAAATAGTGGAAGAGCAACGTAAATGCCCCTAAATAGATTTACAGCCTATCACCTACTTATTATTCTCAGCCACCCCACTAATCTTCACCCGATGGTTTTTCTCAACTAATCACAAAGACATTGGAACACTATACTTTGTATTCGGAGCCTGATCTGGAATGGTTGGAACCTCATTAAGAATACTTATCCGAACGGAATTAGGACAACCAGGCTCCTTAATTGGAGATGACCAAATCTACAACGTCATCGTTACAGCCCACGCCTTTGTTATAATTTTCTTCATGGTTATACCAATCATAATTGGTGGATTCGGAAACTGATTAGTGCCACTAATATTAGGAGCACCAGACATAGCATTCCCACGAATAAACAATATAAGCTTTTGACTACTACCTCCGTCCTTAACCTTACT",
      "detected_biotype": "DNA",
      "gc_percent": 34.214,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 82.7586,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Cavitermes tuberosus (Inquiline Mound-Sharing Termite)",
      "pct_identity_vs_centroid": 82.7586,
      "query_coverage_pct": 99.5,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[F]",
      "sha256_prefix": "2d332fc12205",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2859.6259,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T050"
    },
    {
      "accession": "NC_034123.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Apicotermitinae",
      "cleaned_sequence": "AATGATGAGCCTGACTAAAGGACTATCGTGATAGGATAAAACATGTAGATAAATCTACCTTCATTACATCTAACAGAATCAAACTGTCACCTGCAAGCATCAAAAGCTGTCGTGCACCACACACCAAGATGTAAAATTAAAACCTTATAATAGAAAAGTAAGCTAAAATAAGCTAATGGGTTCATACCCCATAAATAGAGTAAACACTCTCTTCTCTAATGCCTAGTAACTCAACAAAAATCCTACTACTAATCACATTAGTAAGAGGTATATTAGTGTCAGTGTCCTCAAATTCATGACTTGGAGCATGAATAGGATTAGAGATTAACCTAATATCATTTATCCCTCTGATATCCAACGTAAAAAACATGTACAATACAGAGGCCTCACTAAAATATTTTATTGTACAAGTACTTGCCTCAGCCACCTTACTATTCATAGTAGTAATGAAAACGTTAACGGAAGACTTATTCTCATTCGATAGAAACATATATACGCCAATGATCATCTGTACCCCTCTCCTGCTCAAAAGTGGAGCTGCACCTCTTCACTGATGATTCCCAGGAGTAATGGAAGGACTAAGATGAGAAAATTGTGCATTACTAATAACCGTCCAAAAAGCCGCACCACTAATACTAATATCATACCTGATTGAAATAAATACTTTTACACTAAGAATCATTGTAACATCGACAGTCGTTGGAGGAATTGGGGGCCTAAACCAAACCTCTATGCGAAAGATCTTAACCTATTCATCAATTAACCACACTGGATGGATGCTGATCGCACTAACCACAAGAGAAAGCCTGTGATTAACATACTTCGTAATCTATTCCACTCTGGCACTAACAGTAGTGTCAGCCATTAAACTCTCGGGGGTTTCGTTTATTAATCAAACCATATTAACAAACAAGGAGGCTACACTAATAAAGTTCATAATATTTACATCACTATTATCCCTGGGTGGGCTACCACCATTCTTAGGATTTCTACCAAAATGAATTGTTATCCAAGCAATAATTATGAATAACATAATCCCATTAGCAACAGTCGTGGTAGTAACATCACTAATTACACTTTATTACTACCTAAAGATTTCATACTCAAGCTTTTTAATCCTAAACACAGAGCCAAAATGAAACATGAAATCTAATAAAAATAAGACCGGCAGAAACATTAGAGCAGTGGCTTTGTCTTCTATTTCCCTGATAGGGATACTAGTATGCACACTAATCACCAACATTAACTAAGCCTTTGAAGGCCTTAAGTTAAACAAACTAATATCCTTCAAAGCTATAAATAAAGGGTTTCCTTTAGGCCTTGATAAGTCCTTCAACTTACCCCTACAGAATTGCATTCTATAATCACAACATGAATACAAGGCCAAATAATAGTGGAAGAGCAACGTAAATGCCCCTAAATAGATTTACAGCCTATCGCCTACTTATTTGTCTCAGCCATCCCACTAATTTTCACCCGATGATTCTTCTCAACAAATCACAAAGACATTGGAACACTATATTTCGTATTTGGAGCATGATCAGGAATAGTTGGAACATCACTAAGAATACTAATCCGAACAGAGCTGGGACAACCAGGATCTCTAATTGGAGACGATCAAATCTACAACGTCATTGTTACAGCACATGCCTTCGTTATGATTTTCTTCATGGTTATGCCAATCATAATTGGTGGATTTGGAAATTGACTCGTACCACTAATACTAGGAGCACCAGACATGGCCTTCCCACGAATAAACAACATGAGATTTTGACTATTACCACCATCCCTAACACTTCT",
      "detected_biotype": "DNA",
      "gc_percent": 34.9001,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 82.1454,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Anoplotermes parvus (Soldierless Humivorous Soil-Feeding Termite)",
      "pct_identity_vs_centroid": 82.1454,
      "query_coverage_pct": 99.4286,
      "raw_length_bp": 14914,
      "replacement_for_accession": null,
      "sector_code": "[F]",
      "sha256_prefix": "2c12c6df2f73",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2781.1793,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T051"
    },
    {
      "accession": "NC_034143.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Cubitermitinae",
      "cleaned_sequence": "TGTTGAGCCTGAACTAAAGGACTATCGTGATAGGATAAAATATGTAGTTAAACACTACCTTCATTACATCTAACAGAATCAAACTATCCCCGGCAAGTATCAAAAACCACCGTGCACCATACACCAAGATGTAATCAAAACAAGCATTCAAAATAGAAAAGTAAGCTAATATCAAGCTAATGGGTTCATACCCCATAAATAGAGTATAAACTCTCTTCTCTAATGCCCAGTAACTCAACAAAAGTCCTCCTATTAATCACCTTAATAGGGGGTATATTAGTATCTGTATCCTCCAATTCATGACTCGGAGCATGGATTGGATTGGAAATCAATCTAATATCGTTTATCCCTTTAATGTCCAATGTCAAAAATATGTACAATACAGAAGCCTCATTGAGGTATTTCATTGTACAAGTGTTAGCCTCGGCAACACTATTATTTATAGTAGCAATAAAAACGCTAACAGAAGATTTATTCACATTTGATAGAAACCCATATGCACCTATGGTAATTTCTACCCCTCTCCTGCTAAAAAGTGGAGCAGCACCGCTCCACTGATGATTCCCAGGAGTAATAGAGGGGTTAAGATGAGAAAATTGCGCACTACTAATAACAGTGCAAAAAGCCGCTCCATTAATGTTAATATCATATTTAATCGAAATTAACATTTTTACACTAATAATTATTTTGATATCCACAATCGTAGGATCAATTGGAGGATTAAACCAAACCTCAATGCGAAAAATCCTAACCTATTCTTCAATCAACCATACCGGATGAATATTAATTGCCTTATCCACAAGAGAAAACATGTGGATAATATACTTCATAATCTATTCAACTCTGGCAGTAACAGTAGTATTAACCATCAAACTATCCGGAACATCATTTATTAACCAAACCATAATAACAAACAGGGACATCACAATAACTAAATTTATAATATTCACTTCATTGCTTTCTCTTGGAGGACTGCCCCCCTTCCTAGGGTTTCTACCAAAGTGAATTATTATTCAAGCCATAATTATAAATAACCTAGCCCCTCTAGCAACAATTGTAGTAATGACATCCCTAATCACACTATACTACTACCTGAAAATTTCCTATTCAAGATTTATAATTCTGAGATCAGAACCAAAATGAAATTTAAAATCCCATAAAAGCAAATCAGTCAAAAATACAAGAGCACTAATTCTATCCTCAATTTCCCTTATAGGACTAATAATTTGCACAATAATTACTAACATTAATTAGCTAAGGCCTTAAGTTAAGCACTTTAAAACTAATAACCTTCAAAGCTATAAATAAAGGGGTCTCCTTTAGGCCTTGATAAGTTCTGACTCACCCCTATAGAATTGCATTCTATAATCACACAATGAATACAAGACCTTAAATAGTGGAAGAGCAACATAAATACTCCTAAATAGATTTACAGCCTACCGCCTAATTACTCAGCCATCCCACTAATTTTCACCCGATGATTCTTCTCAACTAATCACAAAGACATTGGAACACTATACTTTGTATTTGGAGCCTGATCCGGAATGGTAGGAACCTCCCTAAGCATACTTATTCGAACAGAACTAGGACAACCAGGATCCCTAATTGGAGACGATCAAATTTATAATGTTATTGTAACAGCACATGCCTTCGTCATAATCTTCTTCATAGTTATACCAATTATAATCGGAGGATTTGGAAACTGATTAGTACCACTAATACTAGGAGCACCAGACATAGCATTTCCACGAATAAACAACATGAGTTTCTGGCTACTGCCCCCATCACTAACCCTTCTTC",
      "detected_biotype": "DNA",
      "gc_percent": 32.2542,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 81.3879,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Thoracotermes macrothorax (Afrotropical Alkaline-Gut Soil Termite)",
      "pct_identity_vs_centroid": 81.3879,
      "query_coverage_pct": 99.3571,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[F]",
      "sha256_prefix": "b09df6d7b6df",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2691.9126,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T052"
    },
    {
      "accession": "NC_034076.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Cubitermitinae",
      "cleaned_sequence": "AATGATGAGCCTGATTAAAGGACTATCGTGATAGGATAAAACATGTAGCTAAACCTACCTTCATTACATCTAACAGAATCAAACTATCACCATACAGCATCAAAAGCTACCGTGCACCATACACCAAGATGTAAAAAATGAATTTCAACTTAGAAAAGTAAGCTAAATAAGCTAATGGGTTCATACCCCATAAATAGAGTATAACACTCTCTTCTCTAATGCCCAGTAACTCAACAAAAGTCCTCCTACTAACAACCTTAGTAGGGGGCGTATTAGTATCTGTGTCATCCAATTCATGGTTAGGAGCATGAATAGGATTGGAGATCAACCTAATATCATTTATCCCCCTAATATCCAACGTCAAAAATATGTACAATACGGAAGCCTCACTAAAATATTTTATTGTACAGGTGTTAGCCTCGGCAACACTCCTATTCATGGTAGTAATAAAGACGTTGACGGAAGACCTATTTACATTTGATAGAAGCCCATATACACCAATAATCATCTGTACCCCCCTCCTGTTAAAAAGTGGAGCTGCACCCTTCCACTGATGATTCCCAGGAGTAATAGAGGGACTAAGATGAGAAAACTGCGCACTATTAATAACAGTGCAAAAAGCCGCCCCATTGATATTAATATCATACCTGATTGAAATCAATGCCTTCACACTAAGAATTATTTTAGCCTCCACAATTGTGGGGTCAATCGGGGGATTAAACCAAACTTCGATGCGAAAAATCCTAACCTACTCCTCCATTAATCATACTGGGTGGATGTTAATTGCACTAACCACGGGAGAAAGCTTATGGATAGTATACTTTGCAATCTACTCAACCTTGACGCTAACAGTGGTGTCAGCCATTAACTTATCCGGAGTATCCTTCATCAACCAAACTATGGTAACAAACAAAGAAATCACATTAATCAAATTCATAATATTTACATCCCTGCTATCTCTAGGCGGTTTGCCCCCCTTCCTGGGGTTCCTTCCGAAATGAATTGTTATTCAAGCCATAATCGTAAACAATCTAACCCCACTAGCAACAATTGTTGTCGTAACATCACTAATCACCCTGTACTACTACCTAAAAATCTCTTACTCGAGATTTTTAATTTTAAACACGGAACCAAAATGAAATTTAAAGCCCCACAAAACCAAATCGGCTAAAAACACTTGAACTCTAATTCTATCGTCAATCTCCTTAACAGGGCTGACTGCCTGCACAATCATCACCAACATTAACTAAGACGCAAGGCCTTAAGTTAAACATCAAACTAATAACCTTCAAAGCTATAAATAAAGGGTCTTCCTTTAGGCCTTGGTAAGTCATCTAAACTTACCCCTATAGAATTGCATTCTATAATCACAAAATGAATACAAGGCTCCATAGTAGCGGAAGAGCAATATAACGCTCCTAAATAGATTTACAGCCTATCGCCTATCTTACTCTCAGCCATCCCGCTAATCTTCACCCGATGGTTTTTCTCAACTAATCACAAGGACATTGGAACATTATACTTTGTATTCGGAGCCTGATCAGGAATAGTCGGAACCTCCCTAAGAATACTCATTCGAACAGAACTGGGGCAACCAGGATCTTTAATTGGGGATGATCAAATCTACAACGTCATCGTCACAGCCCATGCCTTCGTTATAATCTTCTTTATAGTTATGCCAATCATAATCGGTGGCTTTGGAAATTGACTAGTGCCACTAATGCTAGGGGCACCAGACATAGCCTTTCCACGAATAAACAACATAAGTTTCTGATTATTACCACCCTCATTAACCCTTTT",
      "detected_biotype": "DNA",
      "gc_percent": 36.0535,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 81.5368,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Ophiotermes grandilabius (Central African Humivorous Termite)",
      "pct_identity_vs_centroid": 81.5368,
      "query_coverage_pct": 99.4286,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[F]",
      "sha256_prefix": "8cffeb7812b0",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2688.3058,
      "super_blast_e_value": 1e-180,
      "tip_code": "F:T053"
    },
    {
      "accession": "PV077933.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "QUARANTINED_NUMT",
      "chimera_5p_3p_delta_pct": 1.8,
      "clade_group": "Termitidae Nasutitermitinae",
      "cleaned_sequence": "",
      "detected_biotype": "DNA",
      "gc_percent": 35.0756,
      "included_in_cleaned_cohort": false,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 2,
      "locus": "Mitochondrial Genome (UNVERIFIED)",
      "nearest_neighbor_accession": "NC_026115.1",
      "nearest_neighbor_identity_pct": 82.6573,
      "nearest_neighbor_taxon": "Nasutitermes corniger (Neotropical Arboreal Polygynous Nasute)",
      "organism": "Nasutitermes surinamensis isolate 1585 (UNVERIFIED GenBank)",
      "pct_identity_vs_centroid": 82.6573,
      "query_coverage_pct": 99.375,
      "raw_length_bp": 15287,
      "replacement_for_accession": null,
      "sector_code": "[G]",
      "sha256_prefix": "cde4919c4bb3",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2433.1291,
      "super_blast_e_value": 1e-180,
      "tip_code": "G:T054"
    },
    {
      "accession": "NC_026115.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Nasutitermitinae",
      "cleaned_sequence": "CTTATAATTATCGAAACCTCTAACAACGGAACAAACCCGACCATAACTAATAGAAAACATATGGAACCCACAAACTTAAGCAACACCCCACTATCTACGCACGAACCTCTCCAACCCCGCATTTTTACACCCAACCAAATAATAAACAAACAGTAACCAAAATCCCTGGTCTAGTAACAATAAAAGTCACATATAAAAATGATGAGCCTGAGTAAAGGACTATCGTGATAGGATAAAACATGTAGTATAAATTAAACTACCTTCATTATATCTAACAGAATCAAACTATCACCTTCAAGCATCAAAAGCCGCCGTGCACCATACACCAAGATATAAAAAGTAAACCTCAACACAGAAAAGTAAGCTAAAACAAGCTAATGGGTTCATACCCCATAAATAGAGCATAAACTCTCTTCTCTGATGCCCAGAAACTCAACCAAAATCCTTTTACTATCTACCCTAGTAGGTGGTGTACTAGTATCTGTATCCTCCAACTCATGGTTAGGAGCATGAATAGGCCTGGAAATCAATTTAATATCATTCATCCCCTTGATATCCAACGTCAAAAACATATATAATACAGAAGCATCACTGAAATACTTTATTGTACAAGTTCTTGCCTCAGCAACACTACTCTTCATGGTAGTAATAAAGACATTAACAGAAGACTTATTCACATTTGAAAGAAGAACCTACACGCCCATAATCATTTGTACCCCCCTCCTGCTAAAAAGTGGAGCAGCCCCCCTTCACTGATGATTCCCAGGAGTAATAGAGGGATTAAGATGAGAAAACTGTGCACTACTAATAACAGTGCAAAAAGCAGCCCCATTGATATTAATATCATACCTGATTGAAATCAATGCATTCACACTAAGAATTATTCTACTATCAACAATTGTAGGATCAATCGGAGGACTAAACCAAACCTCTATACGAAAGATCCTAACCTATTCATCTATCAACCACACAGGATGAATACTAATTGCATTAACCACAAGCGAAAACTTATGAATAGTGTACTTCGCAATCTACTCAACGCTAGCACTCACAGTAGTGTCCGCCATCAAACTATCTGGAGTATCTTTTATCAATCAAACCATATTAACGAATAAAGAGACCACCCTAATAAAATTCATAATATTCACATCATTACTGTCGCTGGGGGGGCTTCCCCCGTTCCTGGGATTCTTGCCAAAATGAATTGTTATTCAAGCCATAATTACAAACAACATGGCCCCACTAGCAACAATTGTAGTAGTGACCTCACTAATCACCCTATACTACTATCTGAAAATCTCCTACTCGAGATTCATGATTTTAAATACAGAACCAAAGTGGAATTTCAAATCCCACAAAACCGAAGCAACAAAAAACATAACAGCAGTAATCCTATCATCAATCTCCCTAACCGGTATGGTAGTCTGCACAGTAATTACCAACATTAACTAAACGAAGGCCTTAAGTTAAAAGCAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTTCTTAACTCACCCCTACAGAATTGCATTCTGTAATCACAAAATGAATACAAGGCTCCCAAGAAGAAATATAGTGGAAGAGCAACGTAATCGCCCCTAAATAGATTTACAGCCTATCGCCTACTTATTTGTCTCAGCCATCCCACTAATGTTCACCCGATGATTCTTCTCAACTAATCACAAAGACATTGGAACTTTATATTTCGTATTTGGAGCTTGATCAGGAATAGTGGGAACGTCCCTAAGAATGCTCATCCGAACAGAGCTAGGACA",
      "detected_biotype": "DNA",
      "gc_percent": 35.0143,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 82.8321,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Nasutitermes corniger (Neotropical Arboreal Polygynous Nasute)",
      "pct_identity_vs_centroid": 82.8321,
      "query_coverage_pct": 92.9643,
      "raw_length_bp": 16122,
      "replacement_for_accession": "PV077933.1",
      "sector_code": "[G]",
      "sha256_prefix": "cd05ec24590c",
      "source_origin": "ReserveReplacement",
      "strand_orientation": "+",
      "super_blast_bit_score": 2666.6654,
      "super_blast_e_value": 1e-180,
      "tip_code": "G:T054"
    },
    {
      "accession": "NC_018131.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Nasutitermitinae",
      "cleaned_sequence": "AATGATGAGCCTGAGTTAAAGGACTATCGTGATAGGATAAAATATGTAGTACAAATTAAACTACCTTCATTACATCTAACAGAATCAAACTATCACCGTCAAGCATCAAAAGCCGCCGTGCACCATACACCAAGATATAATAAACAACCCTCAACATAGAAAAGTAAGCTAAATCAAGCTAATGGGTTCATACCCCATAAATAGAGCATTAACCTCTCTTCTCTGATGCCTAGAAACTCAACCAAAATCCTTTTACTAATTACTCTAGTGGGAGGTATATTAGTATCTGTATCCTCCAACTCGTGATTAGGAGCCTGAATAGGCCTGGAAATCAATCTAATATCATTTATCCCCCTGATATCCAACGTCAAAAACATGTATAATACAGAAGCCTCACTAAAATACTTCATTGTACAAGTTCTTGCCTCAGCAACATTACTCTTCATAGTAGTAATGAAGACCTTAATAGAAGACTTATTCACATTTGAAAGAAGAACATATACATCAATAATCATTTGTACCCCTCTCCTGTTAAAAAGTGGAGCAGCCCCCCTTCACTGATGATTCCCAGGAGTAATAGAGGGATTAAGATGAGAAAATTGTGCATTGCTAATAACAGTGCAAAAAGCAGCCCCATTGATACTAATATCATACCTGATTGAAATCAATGCATTCACACTAAGAATTATTCTACTATCAACAGTTGTTGGATCGATTGGAGGATTAAACCAAACCTCAATACGAAAAATCCTAACCTATTCATCCATTAATCACACTGGATGAATATTAATTGCACTAACCACAAGCGAAAACTTATGAATAGTATACTTCACAATTTACTCAATGCTAGCGCTTACAGTAGTATCCGCCATTAGGTTATCCGGAGTATCTTTTATCAACCAAACCATATTAACAAATAAAGAAACCACGCTAATAAAATTCATAATATTCACATCACTACTATCATTAGGGGGGCTGCCTCCATTCCTAGGATTCCTACCAAAATGAATCGTCATTCAAGCCATAATTATAAATAACATAGCCCCACTAGCAACAATTGTAGTAGTAACCTCACTGATCACTCTGTACTACTACCTAAAGATTTCCTACTCGAGATTTATGATCTTGAATACTGAACCAAAATGAAATTTTAAATCACATAAACCCGAAACAACAAAAAATATAACAGCGGTGGTTCTATCATCCATCTCCTTAACAGGAATGGTAATCTGCACAATCATCACCAATATCAATTAAACGAAGGCCTTAAGTTAAAAGCAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTCTCTAACCCACCCCTATAGAATTGCATTCTATAATCACAAAATGAATACAAGGCTCCCGAAAAAAGAAACATAGTGGAAGAGCAACGTAAACGCCCCTAAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCATCCCACTAATCTTCACCCGATGGTTCTTCTCAACTAATCACAAAGACATTGGAACTTTATATTTTGTATTTGGAGCTTGATCAGGAATAGTAGGAACCTCACTAAGAATACTTATTCGAACAGAACTAGGACAGCCAGGGTCCCTAATTGGAGATGATCAAATCTACAACGTCATTGTCACAGCCCACGCCTTTGTTATAATTTTCTTTATAGTCATGCCAATTATAATTGGTGGCTTTGGAAACTGATTGGTACCTCTAATACTAGGAGCACCAGATATAGCATTCCCACGAATAAACAACATAAGATTCTGACTACTTCCTCCA",
      "detected_biotype": "DNA",
      "gc_percent": 34.223,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.0442,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Nasutitermes triodiae (Australian Cathedral-Mound Nasute)",
      "pct_identity_vs_centroid": 83.0442,
      "query_coverage_pct": 99.9286,
      "raw_length_bp": 15849,
      "replacement_for_accession": null,
      "sector_code": "[G]",
      "sha256_prefix": "4c2b5f264f79",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2906.5134,
      "super_blast_e_value": 1e-180,
      "tip_code": "G:T055"
    },
    {
      "accession": "NC_062440.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Nasutitermitinae",
      "cleaned_sequence": "TGAGCCTGAATAAAGGACTATCGTGATAGGATAAAATATGTAGTACAACCCAAACTACCTTCATTACATCTAACAGAATCAAACTATCACCATCAAGCATCAAAAGCTAACGTGCACCATACACCAAGATGTAACAATTAAATTTCAACATAGAAAAGTAAGCTAAATAAAGCTAATGGGTTCATACCCCATAAATAGAGCATAAACTCTCTTCTCTGATGCCCAGAAACTCAACCAAAATCCTCTTACTAATCACTTTAGTGGGAGGAATATTAGTATCAGTATCCTCCAATTCATGATTAGGAGCATGGATAGGTCTGGAAATCAATCTAATATCATTTATCCCCTTAATATCCAACGTCAAAAACATGTACAATACTGAAGCCTCATTAAAATACTTTATTGTACAAGTTTTAGCCTCAGCAACATTACTCTTCATAGTAGTAATGAAAACTTTGGTAGAAGATTTATTCACATTCGAAAGAAACACATATACATCTATAATCATTTGTACCCCTCTCCTGTTAAAAAGTGGAGCAGCCCCCCTTCACTGATGATTCCCAGGAGTAATAGAGGGATTAAGATGAGAAAATTGTGCACTACTAATAACAGTGCAAAAAGCAGCCCCATTGATGTTACTATCATACCTGATTGAAATCAATGCCTTTACATTAAGAATTATTCTACTATCAACAATTGTAGGATCAATCGGAGGATTAAATCAAACCTCAATACGAAAGATCTTAACATATTCATCTATTAACCACACAGGATGAATATTAATTGCCCTAACCACAAGTGAAAATTTATGAATAATATACTTCATAATCTACTCTATACTAGCGTTAACTGTAGTATCAGCCATCAAGTTATCAGGAACATCTTTTATCAACCAAACCCTATTAACACATAAAGAAACCACACTAATAAAATTCATAATATTTACATCGCTACTCTCCTTAGGAGGACTCCCTCCATTTCTTGGGTTTCTACCTAAATGGATTATCATTCAAGCTATAATTACAAACAATATAGCCCCATTAGCAACAATTGTAGTAGTAACCTCACTAATTACATTATACTACTACTTAAAAATCTCCTACTCAAGATTCATAATTTTGAATATAGAACCAAAATGAAACTTAAAATTCCACAAAAATGAAACAACAAAAAACATTACAGCAGTAATTCTATCCTCAATCTCCCTGACAGGACTAATGATCTGCACAGTAATCACTAACATTAATTAAATGAAGGCCTTAAGTTAAAAGAAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTCTTTAACTCACCCCTACAGAATTGCATTCTGTAATCACATAAATGAATACAAGGCTACAAAAAAAATTATAGTGGAAGAGCAACGTAAATACTCCTAAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCATCCCACTAATCACCCGATGGTTCTTCTCAACAAATCACAAAGATATTGGAACTTTATATTTTGTATTTGGAGCTTGATCAGGTATAGTCGGAACTTCTCTAAGAATACTCATTCGAACAGAACTAGGACAACCAGGATCTCTAATTGGAGATGATCAAATCTACAACGTCATTGTCACAGCCCACGCCTTTGTTATAATTTTCTTCATAGTTATACCAATTATAATTGGTGGCTTCGGAAACTGATTAGTACCTCTAATGCTAGGAGCACCAGATATAGCATTCCCTCGAATGAATAACATAAGATTTTGACTACTCCCTCCATCTCTAACTCTG",
      "detected_biotype": "DNA",
      "gc_percent": 32.0862,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 82.9372,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Nasutitermes tiantongensis (East Asian Subtropical Nasute)",
      "pct_identity_vs_centroid": 82.9372,
      "query_coverage_pct": 99.5,
      "raw_length_bp": 15824,
      "replacement_for_accession": null,
      "sector_code": "[G]",
      "sha256_prefix": "c88610b05e52",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2874.9545,
      "super_blast_e_value": 1e-180,
      "tip_code": "G:T056"
    },
    {
      "accession": "NC_034115.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Nasutitermitinae",
      "cleaned_sequence": "AATGATGAGCCTGAGTAAAGGACTATCGTGATAGGATAAAATATGTAGTAAAAATCAACTACCTTCATTACATCTAACAGAATCAAACTATCACCGTCAAGCATCAAAAGCCGCCGTGCACCATACACCAAGATATAATAAACAAACCTCAACATAGAAAAGTAAGCTAAATCAAGCTAATGGGCTCATACCCCATAAATAGAGCATTAACCTCTCTTCTCTGATGCCTAGAAACTCAACCAAAATCCTTTTACTAATTACTCTAGTAGGAGGTGTATTAGTATCTGTATCCTCCAACTCGTGATTAGGGGCCTGAATAGGCCTGGAAATCAACCTAATATCATTTATCCCTCTGATATCCAACGTCAAAAACATGTATAATACAGAAGCCTCACTAAAATACTTCATTGTACAAGTTCTCGCCTCAGCAACATTACTCTTCATAGTAGTAATGAAGACCTTAATGGAAGACTTATTCACATTTGAAAGAAGAACCTATACGTCCATAATCATTTGTACCCCCCTCCTGTTAAAAAGTGGAGCAGCCCCCCTTCACTGATGATTCCCAGGAGTAATAGAGGGACTAAGATGAGAAAATTGTGCACTGCTAATAACAGTGCAAAAAGCAGCCCCATTGATATTAATGTCATACCTGATTGAAATCAATGCATTCACACTAAGAATTATTCTACTATCAACAATTGTTGGATCGATTGGAGGATTAAACCAAACCTCAATACGAAAAATCCTAACCTATTCATCCATCAATCACACTGGATGAATACTAATCGCATTAACCACAAGCGAAAACTTATGAATAGTATACTTCACAATTTACTCAACGCTAGCACTTACAGTAGTATCCGCCATCAGGCTATCCGGAGTATCCTTTATCAACCAAACCATACTAACAAATAAAGAAACCACGCTAATAAAGTTCATAATATTCACATCACTACTATCATTAGGAGGGCTTCCCCCATTCCTAGGGTTCCTACCAAAATGGATCGTCATCCAAGCCATAATTATAAACAACATAGCCCCACTAGCAACAATTGTAGTAGTAACCTCACTAATCACTCTGTACTACTACCTAAGGATCTCCTACTCGAGATTTATGATCTTAAATACTGAACCAAAATGAAACTTTAAATCGCATAAACCCGAAACAATAAAAAATATAACAGCGGTGGTCCTATCATCCATCTCCCTAACAGGGATGGTAATCTGCACAATCATCACCAACATTAATTAAATGAAGGCCTTAAGTTAAAAGCAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTCTCTTAACCCACCCCTACAGAATTGCATTCTATAATCACAAAATGAATACAAGGCTCCCAAAAAAGAGATATATAGTGGAAGAGCAACGTAAATGCCCCTAAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCATCCCACTAATCTTCACCCGATGGTTCTTCTCAACTAATCACAAAGACATTGGAACTTTATATTTCGTATTTGGAGCTTGATCAGGAATAGTAGGAACCTCGCTAAGAATGCTTATTCGAACAGAGCTAGGACAGCCAGGATCCCTAATTGGAGATGATCAAATCTACAACGTCATTGTCACAGCCCACGCCTTTGTTATAATTTTCTTCATAGTCATGCCAATCATAATTGGTGGCTTTGGAAACTGATTGGTACCCTTAATATTAGGGGCACCAGATATAGCATTCCCACGAATAAACAACATAAGATTCTGGCTGCTTCCCCCA",
      "detected_biotype": "DNA",
      "gc_percent": 35.0033,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 82.9795,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Nasutitermes exitiosus (Southern Australian Mound Nasute)",
      "pct_identity_vs_centroid": 82.9795,
      "query_coverage_pct": 100.0,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[G]",
      "sha256_prefix": "d9cfa98f0b47",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2897.4966,
      "super_blast_e_value": 1e-180,
      "tip_code": "G:T057"
    },
    {
      "accession": "NC_034146.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Nasutitermitinae",
      "cleaned_sequence": "AATGATGAGCCTGAGTTAAAGGACTATCGTGATAGGATAAAATATGTAGTACAAATTAAACTACCTTCATTACATCTAACAGAATCAAACTATCACCGTCAAGCATCAAAAGCCGCCGTGCACCATACACCAAGATATAACAAACAAACTTAACCCAGAAAAGTAAGCTAAATTAAGCTAATGGGTTCATACCCCATAAATAGAGCATACCTCTCTTCTCTGATGCCCAGAAACTCAACCAAAATCCTTTTACTAACTACTTTAGTGGGAGGTATATTAGTATCTGTATCCTCCAATTCATGGTTAGGAGCATGAATAGGCCTGGAAATCAACCTAATATCATTTATTCCTCTGATATCCAACGTCAAAAACATATACAACACAGAAGCCTCACTAAAGTACTTTATTGTACAAGTTCTTGCCTCAGCAACATTACTCTTCATAGTAGTAATGAAAACCCTAACGGAAGATTTATTCACATTTGAAAGAAGAACCTATGCACCCATAATCATTTGTACCCCCCTCCTGTTAAAAAGTGGAGCAGCCCCCCTTCACTGATGATTCCCAGGAGTAATAGAGGGATTAAGATGAGAAAACTGTGCACTGCTAATAACAGTGCAGAAAGCAGCCCCATTGATATTAATATCATACCTGATTGAAATCAATGCATTCACATTAAGAATTATTCTACTATCAACAATTGTAGGATCAATCGGAGGATTAAACCAAACCTCAATACGAAAGATCCTAACCTACTCATCTATCAACCACACTGGATGAATATTAATTGCACTAACCACAAGCGAAAACTTATGAATAGTATACTTCGCAATCTACTCAACGCTAGCACTTACAGTAGTATCTGCCATTAAGTTATCCGGAGTATCTTTCATTAACCAAACCATAATAACAAACAAGGAAACTGCACTAATAAAATTCATAATATTCACATCATTACTATCATTAGGAGGGTTGCCCCCATTCCTAGGGTTCCTACCCAAGTGAATCGTCATTCAAGCCATAATTACAAACAACATAGCCCCACTAGCAACAATCGTAGTGGTAACCTCACTAATCACTCTATATTACTACCTAAAAATCTCCTACTCAAGATTTATAATTTTGAACACCGAACCAAAATGAAATTTCAAATCCCATAAACCCGAAACGACAAAAAATATAACGGCAGTGATTCTATCATCCATTTCCCTAACAGGAATGATAATCTGCACAATCATCACCAACATTAATTAAACGAAGGCCTTAAGTTAAAAGCAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTTCTAACTCACCCCTACAGAATTGCATTCTATAATCACAAAATGAATACAAGGCTCCCAAAAAGAATTATAGTGGAAGAGCAACGTAAACGCCCCTAAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCACCCCACTAATCTTCGCCCGATGATTCTTCTCAACTAATCACAAAGACATTGGAACTTTATATTTTGTATTTGGAGCTTGATCAGGAATAGTCGGAACCTCGCTAAGAATGCTTATTCGAACGGAACTAGGACAGCCGGGATCTCTAATTGGGGACGATCAAATCTACAACGTCATTGTCACAGCCCACGCCTTTGTTATAATTTTCTTTATAGTCATGCCAATCATAATTGGTGGCTTCGGAAACTGGTTAGTGCCTTTAATATTGGGAGCACCAGATATAGCATTCCCACGAATAAACAACATAAGATTCTGACTACTTCCCCCGTCCCTA",
      "detected_biotype": "DNA",
      "gc_percent": 35.5251,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 83.1325,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Nasutitermes macrocephalus (Amazonian Canopy Carton Nasute)",
      "pct_identity_vs_centroid": 83.1325,
      "query_coverage_pct": 99.7143,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[G]",
      "sha256_prefix": "46d8b1095ce0",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2901.1033,
      "super_blast_e_value": 1e-180,
      "tip_code": "G:T058"
    },
    {
      "accession": "NC_034034.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Nasutitermitinae",
      "cleaned_sequence": "AATGATGAGCCTGACTAAAGGACTATCGTGATAGGATAAAACATGTAGCACAAACTACCTTCATTACATCTAACAGAATTAAACTATCACCTTCAAGCATCAAAAGCCGCCGTGCACCATACACCAAGATATAAAATAAAACTCAACGCAGAAAAGTAAGCTAAAATAAGCTAATGGGTTCATACCCCATAAATAGAGCATAAACTCTCTTCTCTGATGCCCAGAAACTCAACCAAAATCCTTTTACTAACTACCCTAGTAGGAGGTGTATTAGTATCTGTATCCTCCAATTCATGGCTAGGAGCATGGATAGGCCTGGAAATTAACCTAATATCATTCATTCCCCTGATATCCAACGTCAAAAACATATACAATACAGAAGCATCACTAAAATACTTTATTGTACAAGTTCTTGCCTCAGCAACATTACTCTTCATGGTAGCAATGAAGACGTTAACGGAAGACTTATTCACATTTGAAAGAAGAACCTATATGCCCATAATCATTTGTACCCCTCTCCTGTTAAAAAGTGGAGCAGCCCCCCTCCACTGATGATTCCCAGGAGTAATAGAGGGATTAAGATGAGAAAACTGTGCACTGCTAATAACAGTGCAAAAAGCAGCCCCATTGATATTAATATCATACCTGATTGAAATCAATGTATTCACAATAAGAATTATTCTACTATCAACAATTGTAGGGTCAATTGGAGGGTTAAACCAAACCTCAATACGAAAGATCCTAACCTATTCATCCATCAACCACACAGGATGAATATTAATCGCACTAACCACAAGTGAAAACCTGTGAATAGTGTACTTCATAATCTACTCAACACTAGCTCTCACGGTAGTATCCGCCATCAAGCTATCCGGAGTATCTTTTATCAATCAAACTATATTAACGAATAAAGAGACTACCTTAATAAAATTCATAATATTCACATCACTACTGTCACTGGGAGGGCTCCCCCCATTCCTGGGATTCTTACCAAAATGAATCGTCATTCAAGCTATAATTACAAATAACATAGCACCCCTAGCAACAATCGTAGTAGTGACCTCCCTAATTACCCTATACTACTACCTAAAAATCTCCTACTCGAGATTTATAATTTTAAATACAGAGCCAAAATGAAACTTTAAACCTCACAAAACCGAAACAACAAAAAACACGGCAGCAGTAATCCTATCATCAATCTCCCTAACCGGTATAGTAGTCTGCACAGTAATTACTAACATTAACTAAACGAAGGCCTTAAGTTAAAAGCAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTTCTTAGCTCACCCCTGCAGAATTGCATTCCGCAATCACAAAATGAATACAAGGCTTCCAAAAAGAACTATAGTGGAAGAGCAACGTAATCGCCCCTAAATAGATTTACAGCCTATCGCCTACTCATTTATCTCAGCCACCCCACTAATCTTCGCCCGATGATTCTTCTCAACAAATCACAAAGACATTGGAACTTTATATTTTGTGTTTGGAGCCTGATCAGGGATAGTAGGAACCTCCCTAAGAATACTTATTCGAACGGAATTAGGACAGCCGGGATCCCTAATTGGAGATGATCAAATCTACAACGTCATTGTCACGGCCCACGCCTTTGTTATAATTTTCTTCATAGTTATGCCAATTATAATCGGCGGATTCGGAAACTGATTAGTACCCTTAATGCTAGGAGCACCAGATATGGCATTCCCACGAATAAACAACATGAGATTCTGACTTCTTCCCCCGTCCTTAACTCT",
      "detected_biotype": "DNA",
      "gc_percent": 36.1204,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 82.5053,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Nasutitermes matangensis (Sundaland Arboreal Nasute)",
      "pct_identity_vs_centroid": 82.5053,
      "query_coverage_pct": 99.6071,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[G]",
      "sha256_prefix": "33d6f91ce672",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2832.5753,
      "super_blast_e_value": 1e-180,
      "tip_code": "G:T059"
    },
    {
      "accession": "NC_036047.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Nasutitermitinae",
      "cleaned_sequence": "GAGCCTGACTAAAGGGCTATCGTGATAGGATAAAATATGTAGTACAAACTTAAACTACCTTCATTACATCTAACAGAATCAAACTATCCCCCTCAAGCATCAAAAGCTACCGTGCACCATACACCAAGATGTAAACACTAAACCCTAACCATAGAAAAGTAAGCTAAATCAAGCTAATGGGTTCATACCCCATAAATAGAGCATTAACCTCTCTTCTCTGATGCCCAGAAACTCAACCAAAATCCTCCTACTAACCACTCTAACAGGGGGTATATTAATATCTGTGTCCTCCAATTCATGACTAGGAGCATGGATAGGCTTGGAAATCAATTTGATATCATTTATTCCACTGATATCCAACGTTAAAAATATATATAACACAGAAGCCTCACTAAAATATTTCATTGTACAAGTACTAGCCTCAGCAACATTACTCTTCATAGTTGTAATGAAAACCTTAACAGAAGAATTATTCACGTTAGAAAGAAGCACATATACGTCTATAATCATTTGTACCCCCCTCCTGTTAAAAAGTGGAGCAGCCCCCCTTCACTGATGATTCCCAGGAGTAATGGAAGGATTAAGATGAGAAAATTGTGCACTACTAATAACGATTCAAAAAGCAGCCCCATTGATGTTACTGTCATACCTGATTGAAATCAATGCCTTCACATTAAGAATTATCCTGCTATCAACAATAGTGGGATCAATTGGAGGATTAAACCAAACCTCAATACGAAAGATTCTAACTTATTCCTCCATTAATCACACTGGATGAATATTAATTGCATTAACTACAAGCGAGTCCTTATGAATAGTATACTTTATAGTTTATTCTACCCTGGTACTAACAGTAGTATCGGCCATCAAGCTGTCCGGAACATCTTTTATTAACCAAACCATGTTAACAAACAAAGAAACCACACTAACAAAATTTATAATATTCACATCCTTGCTATCCTTAGGTGGGCTCCCACCATTCTTAGGATTTCTGCCTAAGTGAATTGTCATTCAAGCTATAATCACAAATAATATAGCCCCACTAGCAACAATCGTAGTGGTAACCTCACTAATCACTTTATATTACTACCTAAAAATCTCATACTCAAGATTCATAATCCTAAGCGTGGAGCCAAAGTGAAACTTGAAATCCCACAAAAACGAAACAATAAAAAACATTACAGCAGTAGGTTTATCATCAATCTCCTTAACAGGGATGGCAATCTGCACAGTCATCATCAACGTTAACTAAATTGAAGGCCTTAAGTTAAAAGCAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTATTTTAACCCACCCCTACAGAATTGCATTCTGTAATCACAAAATGAATACAAGGCTCCCAAAAAGAACTTGTAGTGGAAGAGCAACGTAAATGCCCCTAAATAGATTTACAGCCTATCGCCTACTTATTTATCTCAGCCACCCCACTAATTTTCACCCGATGATTCTTCTCAACTAATCACAAAGACATTGGAACTTTATACTTCGTATTCGGAGCTTGATCAGGAATAGTTGGAACATCGCTGAGAATACTTATTCGGACAGAACTAGGACAACCAGGATCTCTAATTGGAGACGATCAAATCTACAATGTAATCGTTACAGCCCATGCCTTTGTTATAATTTTCTTCATAGTTATACCAATCATGATTGGTGGTTTCGGAAACTGACTAGTACCCTTAATATTAGGAGCACCAGACATAGCATTCCCACGGATAAACAACATAAGATTCTGACTGCTCCCACCATCTC",
      "detected_biotype": "DNA",
      "gc_percent": 34.9498,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 82.4947,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Hospitalitermes medioflavus (Open-Air Processional Lichen-Grazing Nasute)",
      "pct_identity_vs_centroid": 82.4947,
      "query_coverage_pct": 99.7857,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[G]",
      "sha256_prefix": "1302a1bd308a",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2818.1484,
      "super_blast_e_value": 1e-180,
      "tip_code": "G:T060"
    },
    {
      "accession": "NC_034044.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Nasutitermitinae",
      "cleaned_sequence": "AATGATGAGCCTGATTAAAGGACTATCGTGATAGGATAAAATATGTAGTAAAGCATAAAACTACCTTCATTACACCTAACAGAATTAAACTATCACCAGTAAGCATCAAAAGCCACCGTGCACCATACACCAAGGTGTAACAATCAACCCTCAACCCAGAAAAGTAAGCTAAATAAAGCTAATGGGTTCATACCCCATAAATAGAGTAAAACTCTCTTCTCTAATGCCCAGAAACTCTACTAAAATCCTTTTATTAACTACTCTAGTAGGCGGAATATTAATATCTGTATCCTCCAATTCGTGACTAGGAGCATGGATAGGTTTGGAAATCAATTTAATATCTTTTATCCCCCTAATGTCCAACGTCAAAAATATATATAACACAGAAGCCTCATTAAAATATTTCATTGTACAAGTACTAGCCTCAGCAACACTACTCTTCATAGTAGTAATGAAAACCCTAGCAGAGGACCTATTTACATTCGAAAGAAATAACTACACACCAATAATCATTTGTACCCCTCTCCTGTTAAAAAGTGGAGCCGCCCCCCTTCACTGATGATTCCCAGGAGTAATAGAGGGATTAAGATGAGAAAACTGCGCACTACTAATAACAGTGCAAAAAGCAGCCCCATTGATATTAATATCGTACCTGATTGAAATCAATGCCTTCACATTAAGAGTTATTTTGCTATCAACAATTGTAGGATCAATTGGAGGTTTAAACCAAACCTCAATACGAAAAATCCTGACCTATTCGTCTATCAACCACACAGGATGAATATTGATTGCACTAACCACCAGTGAAAATCTATGAATAGTATACTTCATAATCTATTCAACATTGGCATTAACAGCGGTATCTGCAATCAAACTGTCCGGAACATCTTTTATCAACCAAATTATACTAACAAACAAAGAAACCACACTAATAAAATTCATAATATTTACATCCCTACTTTCTTTAGGAGGGCTGCCCCCCTTTCTTGGATTCCTACCCAAATGAATTATTATTCAAGCAATAGTTATAAACAATATGGCCCCATTAGCAGTAATTGTAGTAGTGACCTCACTAATCACTTTATACTACTACCTAAAAATTTCTTACTCAAGATTTATGATTTTGAATACAGAGCCAAAATGAAACTTAAAATCCCACAAAAATGAATTAACAAAAACCATGACAGCAGTAATATTATCATCAATCTCCTTAGCAGGAATAGTAATCTGCACAGTTATTACCAACATTAATTAAAAGTGAAGGCCTTAAGTTAAAAGCAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTCTTAACTCTCACCCCTACAGAATTGCATTCTGTAATCACAAAATGAATACAAGGCTCATCAGAACTAGTGGAAGAGCAACGTGAATGCTCCTAAATAGATTTACAGCCTATCGCCTACTTATTAATCTCAGCCATCCCACTAATCTTCACCCGATGATTCTTCTCAACTAATCACAAAGACATTGGAACTTTATATTTCGTATTTGGAGCCTGATCAGGAATAGTTGGAACTTCATTAAGAATACTTATTCGAACAGAACTAGGACAACCAGGATCCCTAATTGGAGATGATCAAATCTACAACGTCATTGTCACAGCCCACGCCTTTGTTATAATTTTCTTCATAGTTATACCAATCATAATTGGAGGCTTTGGAAACTGACTAGTACCTCTAATACTTGGAGCCCCAGACATAGCTTTCCCACGAATAAACAACATAAGATTCTGATTACTTCCCCCATCCCTA",
      "detected_biotype": "DNA",
      "gc_percent": 33.8729,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 82.5239,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Constrictotermes cyphergaster (Cerrado Rock-Nesting Terpenoid Nasute)",
      "pct_identity_vs_centroid": 82.5239,
      "query_coverage_pct": 99.7857,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[G]",
      "sha256_prefix": "003f5cabda9c",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2828.0669,
      "super_blast_e_value": 1e-180,
      "tip_code": "G:T061"
    },
    {
      "accession": "NC_034929.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Syntermitinae",
      "cleaned_sequence": "AATGATGAGCCTGATTAAAGGATTATCGTGATAGGATAAAACATGTAGATAATACTACCTTCATTACATCTAACAGAATCAAACTATCACCATCAAGCATCAAAAGCCACCGTGCATCATACACCAAGATGTAAAAAAATAATTTTAATATAGAAAAGTAAGCTAAATCAAGCTAATGGGTTCATACCCCGTAAATAGAGTTTAACACTCTCTTCTCTAATGCCCAGTAACTCAACAAAAATCCTCCTGCTAATTATTTTAGTAGGGGGTGTATTAGTATCTGTGTCGTCCAATTCATGATTGGGAGCATGAATAGGACTGGAGATTAATCTAATATCATTTATCCCTTTAATGTCCAACGTCAAAAATATATATAATACAGAAGCCTCACTAAAATATTTCATTGTACAAGTGCTTGCCTCGGCAACACTTCTATTTATGGTAGTAATAAAGACGTTAACAGAGGACTTATTCACATTTGAAATAAACCCATATACACCAATAATCATCTGTACCCCTCTCCTGCTAAAAAGTGGAGCAGCACCTCTCCACTGATGGTTCCCGGGAGTAATGGAAGGATTGAGATGAGAAAATTGTGCACTATTAATAACAGTGCAAAAAGCCGCCCCATTGATGTTAATATCATACCTGATTGAAATCAATGCCTTCACACTAACAATTATTTTGATATCCACTATTGTAGGAGCTATTGGAGGATTAAACCAAACCTCAATACGAAAGATTATAACATACTCATCAATTAATCACACTGGATGAATGTTAATTGCACTTACCACAAGTGAAAATTTGTGAATAGTATACTTCACTATTTACTCAACACTAGCACTAACCGTAGTTTCAGCTATTAAATTATCAGGGGTTTCATTTATCAACCAAACTATAATAACAAACAAAGAGGCTACACTAATAAAATTTATAATATTCACATCATTGTTGTCATTAGGTGGTCTTCCCCCATTCCTCGGATTCCTACCAAAATGAATTGTTATTCAAGCCATAATTACAAATAATTTAACCCCGCTGGCAACAGTTGTAGTAGTGATATCACTAATCACTTTATATTACTACCTAAAAATCTCCTACTCAAGATTCTTAATCTTGAACACAGAACCAAAATGAAACCTGAAGTTTTACAAAAATAAATCAACCAAAAACATTAGAGCTATAATCCTATCTTCAATCTCCCTAACAGGAATGGTAGCCTGCACAATTCTTACTAACATCAACTAATAATCAATGAAGGCCTTAAGTTAAAATTTAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTTAAAGACTTACCCCTATAGAATTGCATTCTATAATCACAAAATGAATACAAGGCTTTAATTAAATAGTGGAAGAGCAACGTAAACGCCCCTAAATAGATTTACAGCCTATCGCCTACTTATTATTCTCAGCCATCCCACTAATCTTCACCCGATGATTTTTCTCAACTAATCACAAGGACATTGGAACTTTATATTTTGTATTCGGAGCCTGATCAGGAATGGTTGGAACCTCTTTAAGAATACTTATTCGAACAGAACTTGGACAACCAGGATCCCTAATTGGAGATGATCAAATCTACAACGTTATTGTCACAGCCCACGCTTTCGTTATAATTTTCTTTATAGTTATACCAATTATAATTGGTGGGTTTGGAAACTGATTAGTTCCACTAATACTCGGAGCCCCAGATATAGCATTCCCCCGAATAAATAATATAAGTTTTTGACTTCTCCCACCTTCACTA",
      "detected_biotype": "DNA",
      "gc_percent": 30.6839,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 81.9085,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Labiotermes labralis (Neotropical Soil-Feeding Labral-Gland Termite)",
      "pct_identity_vs_centroid": 81.9085,
      "query_coverage_pct": 99.7857,
      "raw_length_bp": 15953,
      "replacement_for_accession": null,
      "sector_code": "[G]",
      "sha256_prefix": "745db1e94659",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2755.0305,
      "super_blast_e_value": 1e-180,
      "tip_code": "G:T062"
    },
    {
      "accession": "NC_034930.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Syntermitinae",
      "cleaned_sequence": "GCCTGATTAAAGGATTATCGTGATAGGATAAAACATGTAGTTAAAACTACCATCATTACATCTTTACATCTAACAGAATCAAACTATCACCATCAAGCATCAAAAGCCACCGTGCACCATACACCAAGATGTAATCCATAAATTTCAACATAGAAAAGTAAGCTAATACAAGCTAATGGGTTCATACCCCGTAAATAGAGTTTGACACTCTCTTCTCTAATGCCCAGTAACTCAACAAAAATCCTCTTACTAATTACCTTAGTAGGAGGTGTATTAGTATCTGTGTCCTCTAACTCATGAATGGGGGCATGAATAGGCCTAGAGATTAATCTAATATCATTTATCCCCCTAATATCCAACACTAAAAACATATACAACACAGAAGCCTCGCTAAAATACTTTATTGTACAAGTGCTTGCTTCGGCAACACTACTATTCATAGTGGTAATAAAAACGTTAATAGAGGACTTATTTACATTTGAAGGAAATCTATACACATCAATAATCATCTGTACACCCCTGTTGCTAAAAAGTGGAGCAGCGCCCCTCCACTGATGGTTCCCGGGGGTAATAGAAGGATTAAGATGAGAAAACTGTGCCCTATTAATAACAGTACAAAAAGCCGCCCCACTGATATTAATATCATACCTGATTGAAATTAATATTTTCACACTAATAATTATTTTAATGTCCACAATTGTAGGATCGATTGGAGGGTTAAATCAAACCTCAATACGAAAAATCCTAACTTACTCATCGATTAACCATACCGGATGAATATTAATCGCATTAGCCACAAGTGAAAACTTATGATTAGTATACTTCACAATTTATTCAACATTAGCACTAACTGTAGTGTCAGCCATCAAGTTATCAGGGGTATCTTTTATTAATCAAACCCTGATAACAAATAAGGAAGCCACACTAATAAAATTCATAATATTTACATCGCTCCTATCCCTAGGAGGGCTGCCCCCATTCCTGGGCTTCCTACCAAAATGAATTATTATCCAAGCCATAATTATAAACAACATAGCCCCCCTGGCAACAATTGTAGTAATTACATCACTAATCACCCTGTATTATTACCTGAAAATTTCATACTCGAGTTTCATAATCCTAAATACAGAGCCAAAATGAAATTTAAAATTCCACAAAAATAAACCACTTAAAAATATCAGAGCGCTAATCCTATCAACAATCTCCTTAACGGGGATAGCAATTTGCACAATCATCACCAACCTTAATTAACAACTAAGAAGGCCTTAAGTTAAAACATTAAACTAATAACCTTCAAAGCTATAAATAAAGGGCTTCCTTTAGGCCTTGGTAAGTTCCAACTCACCCCTATAGAATTGCATTCTATAATCACACAATGAATACAAGGCTTACAAAACAACATAGTGGAAGAGCAACGTAAGCGCCCCTAAATAGATTTACAGCCTATCGCCTACTTATTTATCTCAGCCATCCCACTAATTTTCACCCGATGATTCTTCTCAACTAATCACAAAGATATTGGAACACTATACTTCGTATTTGGAGCTTGATCAGGAATGGTCGGAACTTCATTAAGAATACTTATTCGAACAGAACTTGGGCAACCAGGATCCTTAATTGGAGATGACCAAATTTACAACGTTATTGTTACAGCCCACGCTTTCGTTATAATTTTCTTCATAGTTATACCAATTATAATTGGTGGATTCGGAAATTGATTAGTACCACTAATATTGGGAGCACCGGATATAGCATTCCCACGAATAAACAACATAAGATTCTGATTGCTCCCTCCCTCAT",
      "detected_biotype": "DNA",
      "gc_percent": 33.6841,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 82.5239,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Embiratermes neotenicus (Asexual Queen-Succession Syntermitine)",
      "pct_identity_vs_centroid": 82.5239,
      "query_coverage_pct": 99.8571,
      "raw_length_bp": 15868,
      "replacement_for_accession": null,
      "sector_code": "[G]",
      "sha256_prefix": "8931232c94f8",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2830.772,
      "super_blast_e_value": 1e-180,
      "tip_code": "G:T063"
    },
    {
      "accession": "NC_034086.1",
      "adna_terminal_masked_sites": 0,
      "audit_verdict": "PASS_DIRECT",
      "chimera_5p_3p_delta_pct": 0.4,
      "clade_group": "Termitidae Syntermitinae",
      "cleaned_sequence": "AATGATGAGCCTGACTAAAGGACTATCGTGATAGGATAAAATATGTAGTTAAAACTACCTTCATTACATCTAACAGAATCAAACTATTACCATCAAGCATCAAAAGCTACCGTGCACCATACACCAAGATGTAATCAAAAGAGTTCAACATAGAAAAGTAAGCTAAACTAAGCTAATGGGTTCATACCCCATAAATAGAGTATAACACTCTCTTCTCTAATGCCCAGTAACTCAACAAAAATCCTCCTGCTAATTACTTTAGTAGGGGGTGTATTAGTATCTGTATCCTCCAATTCATGATTGGGAGCATGAATTGGCCTAGAGATTAATCTAATATCATTTATCCCTTTGATGTCCAACGTCAAAAATATATACAACACAGAAGCTTCATTAAAATATTTCATTATCCAAGTACTTGCCTCAGCAACATTATTGTTTTTAGTAACAATAAAAACATTAACAGAAGATCTATTCTCATTTGAAAGAAATCTATACACATCAATAATCATCTGTACACCCCTACTGCTAAAAAGTGGAGCTGCACCACTCCACTGATGGTTCCCAGGGGTAATAGAAGGACTAAGATGAGAAAATTGTGCACTATTAATAACAGTACAAAAAGCTGCCCCATTAATGTTAATATCATACCTGATTGAAATTAATGCCTTCACACTAAGAATTATTTTAATATCAACAATTGTAGGATCAATTGGAGGATTAAATCAAACCTCAATGCGAAAAATTTTAACCTATTCATCAATTAACCACACAGGATGAATATTAATTGCATTAACCACAAGCGAAAACTTGTGGTTAGTATACTTCACAATCTACTCAATACTAGCATTGACTGTAGTATCAGCCATTAAATTATCCGGGGTATCTTTCATCAACCAAACCATAATGACTAATAAAGAAGCCACACTAATAAAATTCATAATATTCACATCACTTCTATCCTTGGGTGGTCTTCCACCATTCCTTGGCTTCCTACCAAAATGAATTGTTATCCAAGCCATAATTACAAACAACATGGCCCCACTGGCAACAGTTGTAGTAGTAACATCTTTAATTACCTTATACTACTACTTGAAAATTTCCTACTCAAGTTTCATAATCTTAAATACAGAACCCAAATGAAACCTGAAATTCCATAAAAATAAAACTACTAAAAACATGAGAGCCCTAACTCTATCAACTATTTCCCTAACAGGGATAGCAGCTTGCACAATCATCTCCAACATCAACTAAACAAGGTAATTAAGGCCTTAAGTTAAATACTAAACTAATAACCTTCAAAGCTATAAATAAGGGGTTTCCTTTAGGCCTTGGTAAGTCTTTAACTCACCCCTGTAGAATTGCATTCTACAATCACAAAATGAATACAAGGCCACACTAATAGTGAAAGAGCAACGTAAACGCCCCTAAATAGATTTACAGCCTATCGCCTACTTATTATTCTCAGCCACTCCACTAATTTTCACCCGATGATTTTTCTCAACTAATCACAAAGACATTGGAACATTATATTTTGTGTTTGGAGCCTGATCAGGAATGGTTGGAACTTCATTAAGAATACTTATTCGAACAGAGCTTGGACAACCAGGATCCCTGATTGGAGATGATCAAATTTACAACGTTATTGTTACAGCACATGCTTTCGTCATAATTTTCTTCATAGTTATGCCAATCATAATTGGTGGTTTCGGTAATTGACTAGTACCACTAATACTAGGAGCACCTGACATAGCATTTCCACGAATAAACAATATAAGATTTTGACTACTTCCACCATCACTA",
      "detected_biotype": "DNA",
      "gc_percent": 31.8662,
      "included_in_cleaned_cohort": true,
      "included_in_zero_beaker_control": true,
      "internal_stop_codons": 0,
      "locus": "Complete Mitochondrial Genome (13 PCG + 2 rRNA)",
      "nearest_neighbor_accession": "NC_015800.1",
      "nearest_neighbor_identity_pct": 81.5734,
      "nearest_neighbor_taxon": "Coptotermes formosanus",
      "organism": "Cornitermes cumulans (South American Savanna Mound Syntermitine)",
      "pct_identity_vs_centroid": 81.5734,
      "query_coverage_pct": 99.7857,
      "raw_length_bp": 14950,
      "replacement_for_accession": null,
      "sector_code": "[G]",
      "sha256_prefix": "23a30d3ea38b",
      "source_origin": "NcbiEntrez",
      "strand_orientation": "+",
      "super_blast_bit_score": 2712.6513,
      "super_blast_e_value": 1e-180,
      "tip_code": "G:T064"
    }
  ],
  "core_species_count": 64,
  "execution_policy": "100% Native Rust (bio-suite-supervisor Only — Constrained RuNIE Combinatorial Optimization Across 32 Chains, Dual-Pass SHA-256 Blinded Dry-Lab Validation, Zero External Binaries)",
  "functional_families": [
    {
      "aligned_bp": 1140,
      "aligned_codons": 380,
      "family_code": "FAM-01",
      "family_title": "Endogenous Wood-Lignocellulose Digestion GH9 Cellulases & Laccases (Endoglucanase A / E-4 / Laccase)",
      "motif_rows": [
        [
          "FAM01_N01",
          "MRVFVCILAALALCQAYDYKEVLRDSLLFYEAQRSGKLPADQ"
        ],
        [
          "FAM01_N02",
          "MRVFVCLLSALALCQAYDYKEVLRDSLLFYEAQRSGKLPADQ"
        ],
        [
          "FAM01_N03",
          "MRGFVYLLSALTVCRAYDYAQALRDSLLFYEAQRSGKLPPDQ"
        ],
        [
          "FAM01_N04",
          "MRGFVYLLSALTVCRAYDYAQALRDSLLFYEAQRSGKLPPDQ"
        ],
        [
          "FAM01_N05",
          "MLAMVTTLGVVVAASDYNYSHVLELSLLFYEAQRSGKLPTDN"
        ],
        [
          "FAM01_N06",
          "MLAMVTTLGVVVAASDYNYSHVLELSLLFYEAQRSGKLPTDN"
        ]
      ],
      "msa_cpu_ms": 148,
      "num_records": 12,
      "physiological_role": "Salivary-gland and midgut beta-1,4-endoglucanase cellulose hydrolysis and phenoloxidase lignin modification across xylophagous termites",
      "records_meta": [
        {
          "accession": "XM_023849161.2",
          "family_code": "FAM-01",
          "gc_percent": 52.0212,
          "gene_label": "XM_023849161.2 PREDICTED: Cryptotermes secundus endoglucanase A (LOC1118",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 1509,
          "record_id": "FAM01_N01",
          "sha256_prefix": "49b8966c638f"
        },
        {
          "accession": "XM_023849162.2",
          "family_code": "FAM-01",
          "gc_percent": 50.5984,
          "gene_label": "XM_023849162.2 PREDICTED: Cryptotermes secundus endoglucanase A (LOC1118",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 1504,
          "record_id": "FAM01_N02",
          "sha256_prefix": "3e569b1b692b"
        },
        {
          "accession": "XM_023862710.2",
          "family_code": "FAM-01",
          "gc_percent": 38.7708,
          "gene_label": "XM_023862710.2 PREDICTED: Cryptotermes secundus endoglucanase A (LOC1118",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 2587,
          "record_id": "FAM01_N03",
          "sha256_prefix": "9c6fdd730d90"
        },
        {
          "accession": "XM_023862708.2",
          "family_code": "FAM-01",
          "gc_percent": 45.3714,
          "gene_label": "XM_023862708.2 PREDICTED: Cryptotermes secundus endoglucanase A (LOC1118",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 1750,
          "record_id": "FAM01_N04",
          "sha256_prefix": "a236e864d388"
        },
        {
          "accession": "XM_023860829.2",
          "family_code": "FAM-01",
          "gc_percent": 50.9027,
          "gene_label": "XM_023860829.2 PREDICTED: Cryptotermes secundus endoglucanase E-4 (LOC11",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 2271,
          "record_id": "FAM01_N05",
          "sha256_prefix": "2adc5908ec2b"
        },
        {
          "accession": "XM_023860828.2",
          "family_code": "FAM-01",
          "gc_percent": 49.3878,
          "gene_label": "XM_023860828.2 PREDICTED: Cryptotermes secundus endoglucanase E-4 (LOC11",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 2450,
          "record_id": "FAM01_N06",
          "sha256_prefix": "c33104b06eef"
        },
        {
          "accession": "XM_023871259.1",
          "family_code": "FAM-01",
          "gc_percent": 51.6539,
          "gene_label": "XM_023871259.1 PREDICTED: Cryptotermes secundus endoglucanase A (LOC1118",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 1179,
          "record_id": "FAM01_N07",
          "sha256_prefix": "2224cf9c4296"
        },
        {
          "accession": "XM_023862711.1",
          "family_code": "FAM-01",
          "gc_percent": 45.3451,
          "gene_label": "XM_023862711.1 PREDICTED: Cryptotermes secundus endoglucanase A (LOC1118",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 1246,
          "record_id": "FAM01_N08",
          "sha256_prefix": "1b50a1d9b867"
        },
        {
          "accession": "XM_023862709.1",
          "family_code": "FAM-01",
          "gc_percent": 46.9231,
          "gene_label": "XM_023862709.1 PREDICTED: Cryptotermes secundus endoglucanase A (LOC1118",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 1430,
          "record_id": "FAM01_N09",
          "sha256_prefix": "7a97042cf725"
        },
        {
          "accession": "XM_023851714.2",
          "family_code": "FAM-01",
          "gc_percent": 43.1597,
          "gene_label": "XM_023851714.2 PREDICTED: Cryptotermes secundus laccase (LOC111864458), ",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 3494,
          "record_id": "FAM01_N10",
          "sha256_prefix": "8fca4f7320fc"
        },
        {
          "accession": "XM_023866498.1",
          "family_code": "FAM-01",
          "gc_percent": 52.5045,
          "gene_label": "XM_023866498.1 PREDICTED: Cryptotermes secundus laccase (LOC111872508), ",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 2236,
          "record_id": "FAM01_N11",
          "sha256_prefix": "c9eee2d887c4"
        },
        {
          "accession": "XM_022078377.2",
          "family_code": "FAM-01",
          "gc_percent": 43.6523,
          "gene_label": "XM_022078377.2 PREDICTED: Zootermopsis nevadensis laccase (stw), mRNA",
          "organism": "Zootermopsis nevadensis",
          "raw_length_bp": 4222,
          "record_id": "FAM01_N12",
          "sha256_prefix": "849a522aa907"
        }
      ],
      "selection_result": {
        "beb_sites_p95_count": 0,
        "beb_sites_p99_count": 0,
        "branch_2ratio_lnl": -8156.1643,
        "branch_bg_omega0": 0.1992,
        "branch_fg_omega1": 1.5893,
        "branch_lrt_vs_m0_stat": 2.0929,
        "candidate_sites": [],
        "codon_sites": 380,
        "engine_mode": "SelectionMode::Native",
        "engine_name": "bio-suite Native 61-State Goldman-Yang Codon CTMC + 4D Grid BEB Engine",
        "expected_nonsyn_sites_n": 862.9345,
        "expected_syn_sites_s": 277.0655,
        "genetic_code_icode": 0,
        "lrt_m2a_vs_m1a_pvalue": 1.0,
        "lrt_m2a_vs_m1a_stat": 0.0,
        "m0_kappa": 1.3225,
        "m0_lnl": -8157.2107,
        "m0_omega": 0.2088,
        "m0_tree_length_codon": 15.8423,
        "m0_tree_length_dn": 2.7488,
        "m0_tree_length_ds": 13.1666,
        "m1a_kappa": 1.3313,
        "m1a_lnl": -8132.4595,
        "m1a_omega0": 0.1672,
        "m1a_p0": 0.9075,
        "m1a_p1": 0.0925,
        "m2a_kappa": 1.3313,
        "m2a_lnl": -8132.4595,
        "m2a_omega0": 0.1672,
        "m2a_omega2": 1.0,
        "m2a_p0": 0.9075,
        "m2a_p1": 0.0925,
        "m2a_p2": 0.0,
        "mean_ng86_dn": 1.3485,
        "mean_ng86_ds": 2.1984,
        "mean_ng86_omega": 0.6134,
        "neb_sites_p95_count": 0,
        "relax_intensity_k": 0.2871,
        "sense_codon_states": 61,
        "taxa_count": 12,
        "wall_clock_ms": 14708.3932
      },
      "tree_cpu_ms": 14
    },
    {
      "aligned_bp": 1020,
      "aligned_codons": 340,
      "family_code": "FAM-02",
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        },
        {
          "accession": "XM_022066327.2",
          "family_code": "FAM-04",
          "gc_percent": 44.2376,
          "gene_label": "XM_022066327.2 PREDICTED: Zootermopsis nevadensis Cytochrome P450 4c3 (C",
          "organism": "Zootermopsis nevadensis",
          "raw_length_bp": 2256,
          "record_id": "FAM04_N05",
          "sha256_prefix": "2388fa01aac9"
        },
        {
          "accession": "XM_022066328.2",
          "family_code": "FAM-04",
          "gc_percent": 44.5309,
          "gene_label": "XM_022066328.2 PREDICTED: Zootermopsis nevadensis Cytochrome P450 4c3 (C",
          "organism": "Zootermopsis nevadensis",
          "raw_length_bp": 2185,
          "record_id": "FAM04_N06",
          "sha256_prefix": "713c5a1d20df"
        },
        {
          "accession": "XM_022074460.2",
          "family_code": "FAM-04",
          "gc_percent": 44.4793,
          "gene_label": "XM_022074460.2 PREDICTED: Zootermopsis nevadensis cytochrome P450 6j1-li",
          "organism": "Zootermopsis nevadensis",
          "raw_length_bp": 1911,
          "record_id": "FAM04_N07",
          "sha256_prefix": "1eb7654e0d13"
        },
        {
          "accession": "XM_022074461.2",
          "family_code": "FAM-04",
          "gc_percent": 40.1572,
          "gene_label": "XM_022074461.2 PREDICTED: Zootermopsis nevadensis cytochrome P450 6k1-li",
          "organism": "Zootermopsis nevadensis",
          "raw_length_bp": 3053,
          "record_id": "FAM04_N08",
          "sha256_prefix": "2440f64f43c6"
        },
        {
          "accession": "XM_022074463.2",
          "family_code": "FAM-04",
          "gc_percent": 40.0,
          "gene_label": "XM_022074463.2 PREDICTED: Zootermopsis nevadensis cytochrome P450 6k1-li",
          "organism": "Zootermopsis nevadensis",
          "raw_length_bp": 3170,
          "record_id": "FAM04_N09",
          "sha256_prefix": "3bb5ce9be967"
        },
        {
          "accession": "XM_087340117.1",
          "family_code": "FAM-04",
          "gc_percent": 40.7055,
          "gene_label": "XM_087340117.1 PREDICTED: Zootermopsis nevadensis cytochrome P450 6j1-li",
          "organism": "Zootermopsis nevadensis",
          "raw_length_bp": 2835,
          "record_id": "FAM04_N10",
          "sha256_prefix": "f4d7a3a2fe27"
        },
        {
          "accession": "XM_022068383.2",
          "family_code": "FAM-04",
          "gc_percent": 36.7679,
          "gene_label": "XM_022068383.2 PREDICTED: Zootermopsis nevadensis cytochrome P450 6k1 (L",
          "organism": "Zootermopsis nevadensis",
          "raw_length_bp": 3193,
          "record_id": "FAM04_N11",
          "sha256_prefix": "2824a4fba533"
        },
        {
          "accession": "XM_022074695.2",
          "family_code": "FAM-04",
          "gc_percent": 38.9023,
          "gene_label": "XM_022074695.2 PREDICTED: Zootermopsis nevadensis putative cytochrome P4",
          "organism": "Zootermopsis nevadensis",
          "raw_length_bp": 2478,
          "record_id": "FAM04_N12",
          "sha256_prefix": "61968500eca0"
        }
      ],
      "selection_result": {
        "beb_sites_p95_count": 0,
        "beb_sites_p99_count": 0,
        "branch_2ratio_lnl": -14284.5759,
        "branch_bg_omega0": 0.25,
        "branch_fg_omega1": 1.5,
        "branch_lrt_vs_m0_stat": 0.0,
        "candidate_sites": [],
        "codon_sites": 420,
        "engine_mode": "SelectionMode::Native",
        "engine_name": "bio-suite Native 61-State Goldman-Yang Codon CTMC + 4D Grid BEB Engine",
        "expected_nonsyn_sites_n": 943.3242,
        "expected_syn_sites_s": 316.6758,
        "genetic_code_icode": 0,
        "lrt_m2a_vs_m1a_pvalue": 1.0,
        "lrt_m2a_vs_m1a_stat": 0.0,
        "m0_kappa": 1.5,
        "m0_lnl": -14284.5759,
        "m0_omega": 0.25,
        "m0_tree_length_codon": 30.4128,
        "m0_tree_length_dn": 5.7797,
        "m0_tree_length_ds": 23.119,
        "m1a_kappa": 1.1462,
        "m1a_lnl": -14385.8079,
        "m1a_omega0": 0.2408,
        "m1a_p0": 0.8295,
        "m1a_p1": 0.1705,
        "m2a_kappa": 1.1462,
        "m2a_lnl": -14385.8079,
        "m2a_omega0": 0.2408,
        "m2a_omega2": 1.0,
        "m2a_p0": 0.8295,
        "m2a_p1": 0.1705,
        "m2a_p2": 0.0,
        "mean_ng86_dn": 1.61,
        "mean_ng86_ds": 3.6864,
        "mean_ng86_omega": 0.4367,
        "neb_sites_p95_count": 0,
        "relax_intensity_k": 0.2925,
        "sense_codon_states": 61,
        "taxa_count": 12,
        "wall_clock_ms": 15688.8536
      },
      "tree_cpu_ms": 15
    }
  ],
  "loop_back_iterations": [
    {
      "excluded_fragments": 0,
      "failed_entrez_fetches": 0,
      "iteration": 1,
      "passed_direct": 56,
      "quarantined_numts": 6,
      "quarantined_sample_swaps": 0,
      "replacement_sequences_requested": 6,
      "replacement_sequences_verified": 0,
      "rescued_reverse_complement": 2,
      "sequences_evaluated": 64,
      "summary_note": "Iteration 1 screened 64 initial termite/wood-roach mitogenome slots; quarantined 6 GenBank UNVERIFIED records and auto-oriented 2 antisense records."
    },
    {
      "excluded_fragments": 0,
      "failed_entrez_fetches": 0,
      "iteration": 2,
      "passed_direct": 6,
      "quarantined_numts": 0,
      "quarantined_sample_swaps": 0,
      "replacement_sequences_requested": 0,
      "replacement_sequences_verified": 6,
      "rescued_reverse_complement": 0,
      "sequences_evaluated": 6,
      "summary_note": "Iteration 2 verified all 6 congeneric replacement termite mitogenomes -> 64/64 cleaned full-length organelle records."
    }
  ],
  "mcmc_burnin_discarded": 5000,
  "mcmc_generations": 25000,
  "mcmc_post_burnin_retained": 20000,
  "mito_aligned_cols": 38195,
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    "engine_name": "bio-suite Native Quartet MSC v1 (Exact Tripartition DP + Quartet NNI + LPP)",
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        "f2_quartet_weight": 4.9583,
        "f3_quartet_weight": 1.9583,
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        "local_posterior_pp1": 0.9763,
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        "q3_alt2_freq": 0.1088,
        "subset_size": 2,
        "total_taxa": 64
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        "branch_length_cu": 0.1687,
        "clade_label": "F_T049 + F_T053",
        "coalescent_regime": "Severe ILS / Rapid Radiation Zone (< 0.20 CU)",
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        "f3_quartet_weight": 4.6815,
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        "q3_alt2_freq": 0.2601,
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        "total_taxa": 64
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        "subset_size": 3,
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        "branch_id": "BR-19",
        "branch_length_cu": 0.1677,
        "clade_label": "E_T041 + E_T042 + E_T039 + E_T040",
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        "effective_loci_en": 18.0,
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      {
        "branch_id": "BR-20",
        "branch_length_cu": 0.6448,
        "clade_label": "E_T035 + E_T037",
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        "subset_size": 2,
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      {
        "branch_id": "BR-21",
        "branch_length_cu": 0.6796,
        "clade_label": "E_T034 + E_T036",
        "coalescent_regime": "Moderate Incomplete Lineage Sorting (0.20–1.00 CU)",
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      "target_protein": "Zootermopsis nevadensis Cytochrome P450 CYP4G15 (XM_022073614.2) + Heme IX Active Site",
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        {
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        {
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      ],
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      "evolutionary_context": "Coptotermes formosanus (Formosan Subterranean Termite) — East Asian Native & Trans-Pacific Invasive Subterranean Corridor (Coptotermes formosanus)",
      "isolates": [
        {
          "accession": "OP594248.1",
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          "collection_year": "2020",
          "host_associate": "Field foliage collection",
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          "locality": "Germany: BAM Federal Institute for Materials Research and Testing, Berlin",
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          "raw_length_bp": 685
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        {
          "accession": "MZ501772.1",
          "cohort_code": "R1",
          "collection_year": "24-May-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I02",
          "locality": "China: Huizhou,Guangdong",
          "marker_locus": "mtDNA COX1/COII",
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          "raw_length_bp": 521
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        {
          "accession": "MZ501771.1",
          "cohort_code": "R1",
          "collection_year": "29-Apr-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I03",
          "locality": "China: Guangzhou,Guangdong",
          "marker_locus": "mtDNA COX1/COII",
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          "raw_length_bp": 521
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        {
          "accession": "MZ501770.1",
          "cohort_code": "R1",
          "collection_year": "25-May-2016",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I04",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 500
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        {
          "accession": "MZ501769.1",
          "cohort_code": "R1",
          "collection_year": "10-Jul-2010",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I05",
          "locality": "China: Qingyuan,Guangdong",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 521
        },
        {
          "accession": "MZ501768.1",
          "cohort_code": "R1",
          "collection_year": "01-Nov-2009",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I06",
          "locality": "China: Fangchenggang,Guangxi",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 521
        },
        {
          "accession": "MZ501767.1",
          "cohort_code": "R1",
          "collection_year": "25-Dec-2007",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I07",
          "locality": "East Asian Native & Trans-Pacific Invasive Subterranean Corridor (Coptotermes formosanus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 521
        },
        {
          "accession": "MZ501766.1",
          "cohort_code": "R1",
          "collection_year": "06-Mar-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I08",
          "locality": "China: Fengkai,Guangdong",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 521
        },
        {
          "accession": "MZ501765.1",
          "cohort_code": "R1",
          "collection_year": "04-Apr-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I09",
          "locality": "China: Lianping,Guangdong",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 521
        },
        {
          "accession": "MZ501764.1",
          "cohort_code": "R1",
          "collection_year": "22-Feb-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I10",
          "locality": "China: Guangzhou,Guangdong",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 521
        },
        {
          "accession": "MZ501763.1",
          "cohort_code": "R1",
          "collection_year": "17-Sep-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I11",
          "locality": "China: Ganzhou,Jiangxi",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 521
        },
        {
          "accession": "MZ501762.1",
          "cohort_code": "R1",
          "collection_year": "05-Oct-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I12",
          "locality": "China: Liuzhou,Guangxi",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 500
        },
        {
          "accession": "MZ501761.1",
          "cohort_code": "R1",
          "collection_year": "23-Sep-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I13",
          "locality": "China: Meizhou,Guangdong",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 521
        },
        {
          "accession": "MZ501760.1",
          "cohort_code": "R1",
          "collection_year": "22-Sep-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I14",
          "locality": "China: Jimei,Fujian",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 521
        },
        {
          "accession": "MZ501759.1",
          "cohort_code": "R1",
          "collection_year": "21-Sep-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I15",
          "locality": "China: Nanping,Fujian",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 521
        },
        {
          "accession": "MZ501758.1",
          "cohort_code": "R1",
          "collection_year": "20-Sep-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I16",
          "locality": "China: Pucheng, Zhejiang",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 521
        },
        {
          "accession": "MZ501757.1",
          "cohort_code": "R1",
          "collection_year": "15-Jun-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I17",
          "locality": "China: Changsha, Hunan",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 521
        },
        {
          "accession": "MW558361.1",
          "cohort_code": "R1",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I18",
          "locality": "USA: Hawaii oahu",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 993
        },
        {
          "accession": "MW558360.1",
          "cohort_code": "R1",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I19",
          "locality": "USA: Hawaii oahu",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 993
        },
        {
          "accession": "MW558359.1",
          "cohort_code": "R1",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I20",
          "locality": "Japan: Fukuoka",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 993
        },
        {
          "accession": "MW558358.1",
          "cohort_code": "R1",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I21",
          "locality": "Japan: Wakayama",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 993
        },
        {
          "accession": "DQ493744.1",
          "cohort_code": "R1",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I22",
          "locality": "East Asian Native & Trans-Pacific Invasive Subterranean Corridor (Coptotermes formosanus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 677
        },
        {
          "accession": "MZ424477.1",
          "cohort_code": "R1",
          "collection_year": "15-Jun-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I23",
          "locality": "China",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ424471.1",
          "cohort_code": "R1",
          "collection_year": "01-Nov-2009",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I24",
          "locality": "China",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ424470.1",
          "cohort_code": "R1",
          "collection_year": "25-Dec-2007",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I25",
          "locality": "East Asian Native & Trans-Pacific Invasive Subterranean Corridor (Coptotermes formosanus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ424469.1",
          "cohort_code": "R1",
          "collection_year": "12-Nov-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I26",
          "locality": "East Asian Native & Trans-Pacific Invasive Subterranean Corridor (Coptotermes formosanus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ424468.1",
          "cohort_code": "R1",
          "collection_year": "17-Sep-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I27",
          "locality": "China",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ424467.1",
          "cohort_code": "R1",
          "collection_year": "23-Sep-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I28",
          "locality": "China",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ424466.1",
          "cohort_code": "R1",
          "collection_year": "21-Sep-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I29",
          "locality": "China",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ420500.1",
          "cohort_code": "R1",
          "collection_year": "01-Mar-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I30",
          "locality": "China",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ413511.1",
          "cohort_code": "R1",
          "collection_year": "05-Oct-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I31",
          "locality": "China",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ413510.1",
          "cohort_code": "R1",
          "collection_year": "22-Sep-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I32",
          "locality": "China",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ411392.1",
          "cohort_code": "R1",
          "collection_year": "20-Sep-2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I33",
          "locality": "China",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 668
        },
        {
          "accession": "MW558364.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I34",
          "locality": "USA: CA La Mesa",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 993
        },
        {
          "accession": "MW558363.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I35",
          "locality": "USA: CA La Mesa",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 993
        },
        {
          "accession": "MW558362.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R1_I36",
          "locality": "USA: CA canyon lake",
          "marker_locus": "mtDNA COX1/COII",
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      ],
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        {
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      ],
      "ess": 529.2562,
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        {
          "accession": "PZ724742.1",
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        {
          "accession": "PZ724646.1",
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          "host_associate": "Field foliage collection",
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          "locality": "India: College of Agriculture, Shivamogga, Karnataka",
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        {
          "accession": "PZ724277.1",
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          "collection_year": "21-Apr-2026",
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          "locality": "India: College of Agriculture, Shivamogga, Karnataka",
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        {
          "accession": "PZ724274.1",
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          "raw_length_bp": 617
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        {
          "accession": "PZ724257.1",
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          "collection_year": "11-Apr-2026",
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          "isolate_id": "R2_I05",
          "locality": "India: Hosadurga, Chitradurga, Karnataka",
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          "raw_length_bp": 635
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        {
          "accession": "PZ724249.1",
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          "collection_year": "11-Apr-2026",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I06",
          "locality": "India: Hosadurga, Chitradurga, Karnataka",
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          "raw_length_bp": 675
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        {
          "accession": "PZ724240.1",
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          "collection_year": "20-Mar-2026",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I07",
          "locality": "India: Basaveshwar Nagar, Shivamogga, Karnataka",
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          "raw_length_bp": 734
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        {
          "accession": "PZ724235.1",
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          "collection_year": "20-Mar-2026",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I08",
          "locality": "India: LBS Nagar, Shivamogga, Karnataka",
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          "raw_length_bp": 722
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        {
          "accession": "OP714140.1",
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          "collection_year": "2015",
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          "locality": "France: La Reunion",
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        {
          "accession": "OQ929505.1",
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          "collection_year": "15-Sep-2022",
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          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
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          "raw_length_bp": 794
        },
        {
          "accession": "MZ501755.1",
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          "collection_year": "20-Nov-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I11",
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          "raw_length_bp": 533
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        {
          "accession": "OM472591.1",
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          "raw_length_bp": 685
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        {
          "accession": "OL881263.1",
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          "collection_year": "2021-2025",
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          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
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          "raw_length_bp": 999
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        {
          "accession": "OL881261.1",
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          "isolate_id": "R2_I14",
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        {
          "accession": "OL881258.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I15",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
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          "raw_length_bp": 1000
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        {
          "accession": "OL881255.1",
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          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I16",
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        {
          "accession": "OL881254.1",
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          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
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        {
          "accession": "OL881253.1",
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          "isolate_id": "R2_I18",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
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        },
        {
          "accession": "OL881252.1",
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        {
          "accession": "OL881246.1",
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          "collection_year": "2021-2025",
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          "isolate_id": "R2_I20",
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          "raw_length_bp": 991
        },
        {
          "accession": "OL881244.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I21",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
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          "organism": "Coptotermes gestroi",
          "raw_length_bp": 987
        },
        {
          "accession": "OL881241.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I22",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
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          "raw_length_bp": 948
        },
        {
          "accession": "OL881240.1",
          "cohort_code": "R2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I23",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
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          "raw_length_bp": 975
        },
        {
          "accession": "OK064159.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I24",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
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          "raw_length_bp": 916
        },
        {
          "accession": "OK064158.1",
          "cohort_code": "R2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I25",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes gestroi",
          "raw_length_bp": 929
        },
        {
          "accession": "OK054344.1",
          "cohort_code": "R2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I26",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes gestroi",
          "raw_length_bp": 916
        },
        {
          "accession": "OK054343.1",
          "cohort_code": "R2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I27",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes gestroi",
          "raw_length_bp": 929
        },
        {
          "accession": "MZ562686.1",
          "cohort_code": "R2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I28",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes gestroi",
          "raw_length_bp": 989
        },
        {
          "accession": "MZ429081.1",
          "cohort_code": "R2",
          "collection_year": "11-May-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I29",
          "locality": "China",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes gestroi",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ424794.1",
          "cohort_code": "R2",
          "collection_year": "28-Jul-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I30",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes gestroi",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ424475.1",
          "cohort_code": "R2",
          "collection_year": "20-Nov-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I31",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes gestroi",
          "raw_length_bp": 657
        },
        {
          "accession": "MZ375836.1",
          "cohort_code": "R2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I32",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes gestroi",
          "raw_length_bp": 698
        },
        {
          "accession": "MZ375835.1",
          "cohort_code": "R2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I33",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes gestroi",
          "raw_length_bp": 698
        },
        {
          "accession": "MZ375834.1",
          "cohort_code": "R2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I34",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes gestroi",
          "raw_length_bp": 698
        },
        {
          "accession": "MZ375833.1",
          "cohort_code": "R2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I35",
          "locality": "Southeast Asian & Pantropical Maritime Invasive Corridor (Coptotermes gestroi)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes gestroi",
          "raw_length_bp": 698
        },
        {
          "accession": "MW575256.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R2_I36",
          "locality": "India",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Coptotermes gestroi",
          "raw_length_bp": 668
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      ],
      "locus_name": "mtDNA COX1/COII",
      "msa_cpu_ms": 8002,
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      "tajima_d": 1.4557,
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    },
    {
      "aligned_cols_bp": 978,
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      "clade_lineage": "Reticulitermes flavipes (Eastern Subterranean Termite)",
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      "cohort_source_id": "NCBI Entrez PV133885.1..MK295588.1 (N=36)",
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        {
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        {
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        },
        {
          "active_lineages": 14,
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          "horizon_label": "Horizon 2: Holocene Warmth & Monsoon Forest Surge (11-3 ka)",
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        {
          "active_lineages": 22,
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        },
        {
          "active_lineages": 29,
          "biogeographic_driver": "Trans-oceanic ship-timber and potted-plant transport introducing Coptotermes and Reticulitermes bridgehead colonies",
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          "epoch_label": "19th-20th Century Maritime Timber Trade, Ballast Soil & Urban Structural Founder Bottlenecks",
          "horizon_label": "Horizon 3: Anthropocene Maritime Timber Founder Bottleneck",
          "raw0_ne_median": 415740.0,
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        {
          "active_lineages": 36,
          "biogeographic_driver": "Polygynous urban supercolony proliferation paired with intense selection on cellulase, caste, and P450 detoxification loci",
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          "epoch_label": "1990-2026 Urban Heat-Island Supercolony Expansion & Termiticide/Symbiosis Selection Sweep",
          "horizon_label": "Horizon 4: Modern Urban Supercolony & Coding Sweep (1990-Present)",
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          "unrec4_ne_median": 1509355.0
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      ],
      "ess": 826.3381,
      "evolutionary_context": "Reticulitermes flavipes (Eastern Subterranean Termite) — Nearctic Refugial Forest & Trans-Atlantic Urban Corridor (Reticulitermes flavipes)",
      "isolates": [
        {
          "accession": "PV133885.1",
          "cohort_code": "R3",
          "collection_year": "27-Feb-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I01",
          "locality": "USA",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 680
        },
        {
          "accession": "PV133884.1",
          "cohort_code": "R3",
          "collection_year": "01-Jun-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I02",
          "locality": "USA",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 680
        },
        {
          "accession": "PV121379.1",
          "cohort_code": "R3",
          "collection_year": "27-Feb-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I03",
          "locality": "USA: Wikes Co., GA",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121378.1",
          "cohort_code": "R3",
          "collection_year": "01-Jun-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I04",
          "locality": "USA: Coweta Co., GA",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 628
        },
        {
          "accession": "OR669089.1",
          "cohort_code": "R3",
          "collection_year": "27-Apr-2022",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I05",
          "locality": "Belgium: Brugellette",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 679
        },
        {
          "accession": "OR669088.1",
          "cohort_code": "R3",
          "collection_year": "27-Apr-2022",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I06",
          "locality": "Belgium: Brugellette",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 678
        },
        {
          "accession": "OR661729.1",
          "cohort_code": "R3",
          "collection_year": "27-Apr-2022",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I07",
          "locality": "Belgium: Brugellette",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 644
        },
        {
          "accession": "OR661728.1",
          "cohort_code": "R3",
          "collection_year": "27-Apr-2022",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I08",
          "locality": "Belgium: Brugellette",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 661
        },
        {
          "accession": "OR661723.1",
          "cohort_code": "R3",
          "collection_year": "27-Apr-2022",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I09",
          "locality": "Belgium: Brugellette",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 804
        },
        {
          "accession": "OR661722.1",
          "cohort_code": "R3",
          "collection_year": "27-Apr-2022",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I10",
          "locality": "Belgium: Brugellette",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 819
        },
        {
          "accession": "OQ988003.1",
          "cohort_code": "R3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I11",
          "locality": "Nearctic Refugial Forest & Trans-Atlantic Urban Corridor (Reticulitermes flavipes)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 625
        },
        {
          "accession": "OM421644.1",
          "cohort_code": "R3",
          "collection_year": "06-Nov-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I12",
          "locality": "USA: New York, Queens, Corona, NY Hall of Science",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 658
        },
        {
          "accession": "DQ493728.1",
          "cohort_code": "R3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I13",
          "locality": "Nearctic Refugial Forest & Trans-Atlantic Urban Corridor (Reticulitermes flavipes)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 677
        },
        {
          "accession": "DQ493727.1",
          "cohort_code": "R3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I14",
          "locality": "Nearctic Refugial Forest & Trans-Atlantic Urban Corridor (Reticulitermes flavipes)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 786
        },
        {
          "accession": "DQ493726.1",
          "cohort_code": "R3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I15",
          "locality": "Nearctic Refugial Forest & Trans-Atlantic Urban Corridor (Reticulitermes flavipes)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 786
        },
        {
          "accession": "DQ493725.1",
          "cohort_code": "R3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I16",
          "locality": "Nearctic Refugial Forest & Trans-Atlantic Urban Corridor (Reticulitermes flavipes)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 677
        },
        {
          "accession": "MK950846.1",
          "cohort_code": "R3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I17",
          "locality": "USA",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 652
        },
        {
          "accession": "MK950845.1",
          "cohort_code": "R3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I18",
          "locality": "USA",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 626
        },
        {
          "accession": "MN164014.1",
          "cohort_code": "R3",
          "collection_year": "28-Feb-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I19",
          "locality": "USA: New York, Calverton, Peconic River Estuary",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 582
        },
        {
          "accession": "MK295604.1",
          "cohort_code": "R3",
          "collection_year": "RfA146b_1",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I20",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295603.1",
          "cohort_code": "R3",
          "collection_year": "RfA145c_3",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I21",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295602.1",
          "cohort_code": "R3",
          "collection_year": "RfA145c_2",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I22",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295601.1",
          "cohort_code": "R3",
          "collection_year": "RfA145c_1",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I23",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295600.1",
          "cohort_code": "R3",
          "collection_year": "RfA145b_3",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I24",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295599.1",
          "cohort_code": "R3",
          "collection_year": "RfA145b_2",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I25",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295598.1",
          "cohort_code": "R3",
          "collection_year": "RfA145b_1",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I26",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295597.1",
          "cohort_code": "R3",
          "collection_year": "RfA143_3",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I27",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295596.1",
          "cohort_code": "R3",
          "collection_year": "RfA143_2",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I28",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295595.1",
          "cohort_code": "R3",
          "collection_year": "RfA143_1",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I29",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295594.1",
          "cohort_code": "R3",
          "collection_year": "RfA142b_3",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I30",
          "locality": "USA: North Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295593.1",
          "cohort_code": "R3",
          "collection_year": "RfA142b_2",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I31",
          "locality": "USA: North Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295592.1",
          "cohort_code": "R3",
          "collection_year": "RfA142b_1",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I32",
          "locality": "USA: North Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295591.1",
          "cohort_code": "R3",
          "collection_year": "RfA141c_3",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I33",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295590.1",
          "cohort_code": "R3",
          "collection_year": "RfA141c_2",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I34",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295589.1",
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          "collection_year": "RfA141c_1",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I35",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
        },
        {
          "accession": "MK295588.1",
          "cohort_code": "R3",
          "collection_year": "RfA141_3",
          "host_associate": "Field foliage collection",
          "isolate_id": "R3_I36",
          "locality": "USA: South Carolina",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 554
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      ],
      "locus_name": "mtDNA COX1/COII",
      "msa_cpu_ms": 5267,
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      "num_isolates": 36,
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      "rcfv_unrecoded": 0.0525,
      "region_label": "Nearctic Refugial Forest & Trans-Atlantic Urban Corridor (Reticulitermes flavipes)",
      "rhat": 1.0012,
      "runie_ry3_marginal_ln_l": -2973.6018,
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      "species": "Reticulitermes flavipes",
      "tajima_d": 1.7381,
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    },
    {
      "aligned_cols_bp": 673,
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      "clade_lineage": "Reticulitermes speratus (Asexual-Queen-Succession Termite)",
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      "cohort_source_id": "NCBI Entrez OR126569.1..OR126534.1 (N=36)",
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        {
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        },
        {
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          "biogeographic_driver": "Trans-oceanic ship-timber and potted-plant transport introducing Coptotermes and Reticulitermes bridgehead colonies",
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          "horizon_label": "Horizon 3: Anthropocene Maritime Timber Founder Bottleneck",
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        {
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          "biogeographic_driver": "Polygynous urban supercolony proliferation paired with intense selection on cellulase, caste, and P450 detoxification loci",
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          "epoch_label": "1990-2026 Urban Heat-Island Supercolony Expansion & Termiticide/Symbiosis Selection Sweep",
          "horizon_label": "Horizon 4: Modern Urban Supercolony & Coding Sweep (1990-Present)",
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      ],
      "ess": 102.0196,
      "evolutionary_context": "Reticulitermes speratus (Asexual-Queen-Succession Termite) — Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
      "isolates": [
        {
          "accession": "OR126569.1",
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          "collection_year": "03-Sep-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I01",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
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          "raw_length_bp": 673
        },
        {
          "accession": "OR126568.1",
          "cohort_code": "R4",
          "collection_year": "03-Sep-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I02",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126567.1",
          "cohort_code": "R4",
          "collection_year": "15-Jun-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I03",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126566.1",
          "cohort_code": "R4",
          "collection_year": "10-Apr-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I04",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126565.1",
          "cohort_code": "R4",
          "collection_year": "10-Apr-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I05",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126564.1",
          "cohort_code": "R4",
          "collection_year": "08-Apr-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I06",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126563.1",
          "cohort_code": "R4",
          "collection_year": "08-Apr-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I07",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126562.1",
          "cohort_code": "R4",
          "collection_year": "08-Apr-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I08",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126561.1",
          "cohort_code": "R4",
          "collection_year": "07-Jan-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I09",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126560.1",
          "cohort_code": "R4",
          "collection_year": "09-Mar-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I10",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126559.1",
          "cohort_code": "R4",
          "collection_year": "09-Mar-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I11",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126558.1",
          "cohort_code": "R4",
          "collection_year": "17-Jun-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I12",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126557.1",
          "cohort_code": "R4",
          "collection_year": "17-Jun-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I13",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126556.1",
          "cohort_code": "R4",
          "collection_year": "26-Jun-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I14",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126555.1",
          "cohort_code": "R4",
          "collection_year": "14-May-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I15",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126554.1",
          "cohort_code": "R4",
          "collection_year": "12-May-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I16",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126553.1",
          "cohort_code": "R4",
          "collection_year": "07-Nov-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I17",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126552.1",
          "cohort_code": "R4",
          "collection_year": "07-Nov-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I18",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126551.1",
          "cohort_code": "R4",
          "collection_year": "06-Nov-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I19",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126550.1",
          "cohort_code": "R4",
          "collection_year": "04-Sep-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I20",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126549.1",
          "cohort_code": "R4",
          "collection_year": "02-Apr-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I21",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126548.1",
          "cohort_code": "R4",
          "collection_year": "26-Apr-2016",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I22",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126547.1",
          "cohort_code": "R4",
          "collection_year": "06-Apr-2016",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I23",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126546.1",
          "cohort_code": "R4",
          "collection_year": "15-Apr-2016",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I24",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126545.1",
          "cohort_code": "R4",
          "collection_year": "15-Apr-2016",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I25",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126544.1",
          "cohort_code": "R4",
          "collection_year": "02-Sep-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I26",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126543.1",
          "cohort_code": "R4",
          "collection_year": "15-Sep-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I27",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126542.1",
          "cohort_code": "R4",
          "collection_year": "24-Sep-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I28",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126541.1",
          "cohort_code": "R4",
          "collection_year": "04-Apr-2016",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I29",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126540.1",
          "cohort_code": "R4",
          "collection_year": "19-Apr-2016",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I30",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126539.1",
          "cohort_code": "R4",
          "collection_year": "04-Apr-2016",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I31",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126538.1",
          "cohort_code": "R4",
          "collection_year": "03-Oct-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I32",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126537.1",
          "cohort_code": "R4",
          "collection_year": "29-Apr-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I33",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126536.1",
          "cohort_code": "R4",
          "collection_year": "21-Apr-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I34",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
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          "organism": "Reticulitermes speratus",
          "raw_length_bp": 673
        },
        {
          "accession": "OR126535.1",
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          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I35",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
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          "raw_length_bp": 673
        },
        {
          "accession": "OR126534.1",
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          "collection_year": "15-Apr-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R4_I36",
          "locality": "Japanese Archipelago & East Asian Temperate Forest Corridor (Reticulitermes speratus)",
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      ],
      "locus_name": "mtDNA COX1/COII",
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    {
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        {
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        {
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        {
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      ],
      "ess": 705.5666,
      "evolutionary_context": "Macrotermes spp. (Fungus-Growing Mound Termites) — Afrotropical & Indo-Malayan Savanna Cathedral-Mound Corridor (Macrotermes natalensis / M. barneyi)",
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        {
          "accession": "PX275312.1",
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        {
          "accession": "PX275308.1",
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          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I02",
          "locality": "Togo: Oti-Keran National Park",
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        {
          "accession": "PX275307.1",
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          "isolate_id": "R5_I03",
          "locality": "Togo: Oti-Keran National Park",
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        {
          "accession": "PX275301.1",
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          "collection_year": "20-Jan-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I04",
          "locality": "Cote d'Ivoire: Comoe National Park",
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        {
          "accession": "PX275298.1",
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          "collection_year": "20-Jan-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I05",
          "locality": "Cote d'Ivoire: Comoe National Park",
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        },
        {
          "accession": "PX275296.1",
          "cohort_code": "R5",
          "collection_year": "20-Jan-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I06",
          "locality": "Cote d'Ivoire: Comoe National Park",
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        },
        {
          "accession": "PX275294.1",
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          "collection_year": "20-Jan-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I07",
          "locality": "Cote d'Ivoire: Comoe National Park",
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          "raw_length_bp": 629
        },
        {
          "accession": "PX275268.1",
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          "collection_year": "02-Jul-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I08",
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          "raw_length_bp": 594
        },
        {
          "accession": "PX275258.1",
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          "collection_year": "02-Jul-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I09",
          "locality": "Cote d'Ivoire: Comoe National Park",
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          "raw_length_bp": 570
        },
        {
          "accession": "PX275108.1",
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          "collection_year": "16-Jan-2017",
          "host_associate": "Field foliage collection",
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          "locality": "Cote d'Ivoire: Comoe National Park",
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          "raw_length_bp": 629
        },
        {
          "accession": "PX275100.1",
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          "collection_year": "10-Jan-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I11",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
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        },
        {
          "accession": "PX275099.1",
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          "collection_year": "21-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I12",
          "locality": "Cote d'Ivoire: Comoe National Park",
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        },
        {
          "accession": "PX275082.1",
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          "collection_year": "12-Jan-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I13",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
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          "raw_length_bp": 629
        },
        {
          "accession": "PX275080.1",
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          "collection_year": "12-Jan-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I14",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
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          "raw_length_bp": 629
        },
        {
          "accession": "PX275074.1",
          "cohort_code": "R5",
          "collection_year": "12-Jan-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I15",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
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          "raw_length_bp": 629
        },
        {
          "accession": "PX274851.1",
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          "collection_year": "28-May-2016",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I16",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 543
        },
        {
          "accession": "PX274428.1",
          "cohort_code": "R5",
          "collection_year": "21-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I17",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
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          "raw_length_bp": 629
        },
        {
          "accession": "PX274427.1",
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          "collection_year": "21-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I18",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
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          "raw_length_bp": 629
        },
        {
          "accession": "PX274421.1",
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          "collection_year": "17-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I19",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
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          "raw_length_bp": 629
        },
        {
          "accession": "PX274415.1",
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          "collection_year": "17-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I20",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes subhyalinus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274414.1",
          "cohort_code": "R5",
          "collection_year": "21-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I21",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes subhyalinus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274383.1",
          "cohort_code": "R5",
          "collection_year": "20-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I22",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274382.1",
          "cohort_code": "R5",
          "collection_year": "20-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I23",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274381.1",
          "cohort_code": "R5",
          "collection_year": "20-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I24",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274378.1",
          "cohort_code": "R5",
          "collection_year": "16-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I25",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274334.1",
          "cohort_code": "R5",
          "collection_year": "19-Jan-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I26",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274271.1",
          "cohort_code": "R5",
          "collection_year": "06-Jan-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I27",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274263.1",
          "cohort_code": "R5",
          "collection_year": "31-Dec-2016",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I28",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274260.1",
          "cohort_code": "R5",
          "collection_year": "18-Jan-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I29",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274253.1",
          "cohort_code": "R5",
          "collection_year": "31-Dec-2016",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I30",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274252.1",
          "cohort_code": "R5",
          "collection_year": "19-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I31",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274250.1",
          "cohort_code": "R5",
          "collection_year": "15-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I32",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274249.1",
          "cohort_code": "R5",
          "collection_year": "13-Jun-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I33",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274248.1",
          "cohort_code": "R5",
          "collection_year": "03-Jan-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I34",
          "locality": "Cote d'Ivoire: Comoe National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 629
        },
        {
          "accession": "PX274230.1",
          "cohort_code": "R5",
          "collection_year": "30-May-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I35",
          "locality": "Togo: Oti-Keran National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
          "raw_length_bp": 580
        },
        {
          "accession": "PX274225.1",
          "cohort_code": "R5",
          "collection_year": "30-May-2014",
          "host_associate": "Field foliage collection",
          "isolate_id": "R5_I36",
          "locality": "Togo: Oti-Keran National Park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Macrotermes bellicosus",
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      ],
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    },
    {
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        {
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        {
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          "horizon_label": "Late Holocene Regional Expansion (3.0-0.12 ka)",
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        {
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          "biogeographic_driver": "Trans-oceanic ship-timber and potted-plant transport introducing Coptotermes and Reticulitermes bridgehead colonies",
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          "epoch_label": "19th-20th Century Maritime Timber Trade, Ballast Soil & Urban Structural Founder Bottlenecks",
          "horizon_label": "Horizon 3: Anthropocene Maritime Timber Founder Bottleneck",
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        {
          "active_lineages": 36,
          "biogeographic_driver": "Polygynous urban supercolony proliferation paired with intense selection on cellulase, caste, and P450 detoxification loci",
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      ],
      "ess": 51.3175,
      "evolutionary_context": "Nasutitermes spp. (Frontal-Gland Nasute Termites) — Neotropical & Australasian Canopy Carton-Nest Corridor (Nasutitermes corniger / N. exitiosus)",
      "isolates": [
        {
          "accession": "PX550554.1",
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          "collection_year": "May-2022",
          "host_associate": "Field foliage collection",
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          "locality": "French Guiana: Roura",
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        {
          "accession": "PX550553.1",
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          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I02",
          "locality": "French Guiana: Roura",
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          "raw_length_bp": 618
        },
        {
          "accession": "PX550552.1",
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          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I03",
          "locality": "French Guiana: Roura",
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          "raw_length_bp": 634
        },
        {
          "accession": "PX550551.1",
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          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I04",
          "locality": "French Guiana: Roura",
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          "raw_length_bp": 637
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        {
          "accession": "PX550550.1",
          "cohort_code": "R6",
          "collection_year": "May-2022",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I05",
          "locality": "French Guiana: Roura",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes sp.",
          "raw_length_bp": 619
        },
        {
          "accession": "PZ268059.1",
          "cohort_code": "R6",
          "collection_year": "25-May-2024",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I06",
          "locality": "Madagascar: Toamasina Province, Analamazaotra national park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes canaliculatus",
          "raw_length_bp": 684
        },
        {
          "accession": "PZ268058.1",
          "cohort_code": "R6",
          "collection_year": "25-May-2024",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I07",
          "locality": "Madagascar: Toamasina Province, Analamazaotra national park",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes canaliculatus",
          "raw_length_bp": 678
        },
        {
          "accession": "PX226735.1",
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          "collection_year": "15-Jul-2015",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I08",
          "locality": "Colombia: Magdalena, Via Parque Isla de Salamanca (VIPIS)",
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          "organism": "Nasutitermes nigriceps",
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        },
        {
          "accession": "PX436857.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
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          "locality": "Indonesia: Riau Forest, Sumatra Island",
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          "organism": "Nasutitermes matangensis",
          "raw_length_bp": 685
        },
        {
          "accession": "PX608229.1",
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          "collection_year": "30-Nov-2022",
          "host_associate": "Field foliage collection",
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          "locality": "India: Kerala, Karivellur",
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          "raw_length_bp": 655
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        {
          "accession": "PP209591.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I11",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes coxipoensis",
          "raw_length_bp": 673
        },
        {
          "accession": "PP209590.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
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          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
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          "raw_length_bp": 685
        },
        {
          "accession": "PP209589.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I13",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes coxipoensis",
          "raw_length_bp": 605
        },
        {
          "accession": "PP209588.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I14",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes coxipoensis",
          "raw_length_bp": 671
        },
        {
          "accession": "PP209587.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I15",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
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          "raw_length_bp": 671
        },
        {
          "accession": "PP209586.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I16",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
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          "raw_length_bp": 685
        },
        {
          "accession": "PP209585.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I17",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes coxipoensis",
          "raw_length_bp": 671
        },
        {
          "accession": "PP209584.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I18",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes coxipoensis",
          "raw_length_bp": 671
        },
        {
          "accession": "PP209583.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I19",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes coxipoensis",
          "raw_length_bp": 589
        },
        {
          "accession": "PP209582.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I20",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes coxipoensis",
          "raw_length_bp": 589
        },
        {
          "accession": "PP209581.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I21",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes ephratae",
          "raw_length_bp": 671
        },
        {
          "accession": "PP209580.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I22",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes ephratae",
          "raw_length_bp": 671
        },
        {
          "accession": "PP209579.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I23",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes ephratae",
          "raw_length_bp": 671
        },
        {
          "accession": "PP209578.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I24",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes ephratae",
          "raw_length_bp": 671
        },
        {
          "accession": "PP209577.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I25",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes ephratae",
          "raw_length_bp": 592
        },
        {
          "accession": "PP209576.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I26",
          "locality": "Brazil",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes ephratae",
          "raw_length_bp": 586
        },
        {
          "accession": "MF176392.1",
          "cohort_code": "R6",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I27",
          "locality": "Neotropical & Australasian Canopy Carton-Nest Corridor (Nasutitermes corniger / N. exitiosus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes sp.",
          "raw_length_bp": 633
        },
        {
          "accession": "PP865437.1",
          "cohort_code": "R6",
          "collection_year": "02-Feb-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I28",
          "locality": "Neotropical & Australasian Canopy Carton-Nest Corridor (Nasutitermes corniger / N. exitiosus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes callimorphus",
          "raw_length_bp": 512
        },
        {
          "accession": "PP865436.1",
          "cohort_code": "R6",
          "collection_year": "02-Feb-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I29",
          "locality": "Neotropical & Australasian Canopy Carton-Nest Corridor (Nasutitermes corniger / N. exitiosus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes callimorphus",
          "raw_length_bp": 694
        },
        {
          "accession": "PP865435.1",
          "cohort_code": "R6",
          "collection_year": "02-Feb-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I30",
          "locality": "Neotropical & Australasian Canopy Carton-Nest Corridor (Nasutitermes corniger / N. exitiosus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes callimorphus",
          "raw_length_bp": 694
        },
        {
          "accession": "PP865434.1",
          "cohort_code": "R6",
          "collection_year": "02-Feb-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I31",
          "locality": "Neotropical & Australasian Canopy Carton-Nest Corridor (Nasutitermes corniger / N. exitiosus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes callimorphus",
          "raw_length_bp": 694
        },
        {
          "accession": "PP865433.1",
          "cohort_code": "R6",
          "collection_year": "31-Jan-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I32",
          "locality": "Neotropical & Australasian Canopy Carton-Nest Corridor (Nasutitermes corniger / N. exitiosus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes callimorphus",
          "raw_length_bp": 694
        },
        {
          "accession": "PP865432.1",
          "cohort_code": "R6",
          "collection_year": "25-May-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I33",
          "locality": "Neotropical & Australasian Canopy Carton-Nest Corridor (Nasutitermes corniger / N. exitiosus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes callimorphus",
          "raw_length_bp": 694
        },
        {
          "accession": "PP865431.1",
          "cohort_code": "R6",
          "collection_year": "06-May-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I34",
          "locality": "Neotropical & Australasian Canopy Carton-Nest Corridor (Nasutitermes corniger / N. exitiosus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes callimorphus",
          "raw_length_bp": 694
        },
        {
          "accession": "PP865430.1",
          "cohort_code": "R6",
          "collection_year": "01-May-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I35",
          "locality": "Neotropical & Australasian Canopy Carton-Nest Corridor (Nasutitermes corniger / N. exitiosus)",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes callimorphus",
          "raw_length_bp": 694
        },
        {
          "accession": "PV069360.1",
          "cohort_code": "R6",
          "collection_year": "Jun-2024",
          "host_associate": "Field foliage collection",
          "isolate_id": "R6_I36",
          "locality": "India: karnataka",
          "marker_locus": "mtDNA COX1/COII",
          "organism": "Nasutitermes indicola",
          "raw_length_bp": 670
        }
      ],
      "locus_name": "mtDNA COX1/COII",
      "msa_cpu_ms": 5584,
      "nucleotide_diversity_pi": 0.2161,
      "num_isolates": 36,
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      "raw0_ln_l": -4296.1773,
      "raw_bp": 23461,
      "rcfv_codon12": 0.0425,
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      "rcfv_unrecoded": 0.0633,
      "region_label": "Neotropical & Australasian Canopy Carton-Nest Corridor (Nasutitermes corniger / N. exitiosus)",
      "rhat": 1.989,
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      "runie_ry3_post_mean_ln_l": -3679.3349,
      "species": "Nasutitermes spp.",
      "tajima_d": 2.8759,
      "total_cpu_ms": 5671,
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    },
    {
      "aligned_cols_bp": 1586,
      "axis_group": "Same-Region Multi-Locus (Fig 4B: Paleotropical & Holarctic)",
      "clade_lineage": "Odontotermes / Macrotermitinae (Fungus-Comb Termites)",
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      "cohort_source_id": "NCBI Entrez QB229757.1..PP313124.1 (N=36)",
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        {
          "active_lineages": 14,
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        {
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          "coalescent_events": 8,
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          "epoch_label": "Last Glacial Maximum (LGM) Aridity, Boreal Glaciation & Rainforest Refugial Fragmentation",
          "horizon_label": "Horizon 1: LGM Aridity & Forest Refugium Bottleneck (22-14 ka)",
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          "runie_ry3_ne_median": 310076.0,
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          "unrec4_ne_median": 337363.0
        },
        {
          "active_lineages": 31,
          "biogeographic_driver": "Post-glacial reforestation of North America/East Asia and monsoon expansion of Paleotropical fungus-growing mounds",
          "coalescent_events": 9,
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          "codon12_ne_median": 946769.0,
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          "epoch_label": "Early-to-Mid Holocene African Humid Period & Post-Glacial Broadleaf Forest Recolonization",
          "horizon_label": "Horizon 2: Holocene Warmth & Monsoon Forest Surge (11-3 ka)",
          "raw0_ne_median": 780557.0,
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          "runie_ry3_ne_median": 918302.0,
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          "time_start_ka": 14.0,
          "unrec4_ne_median": 1006459.0
        },
        {
          "active_lineages": 36,
          "biogeographic_driver": "Sustained regional colony density across tropical savannas and deadwood-rich temperate forests",
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          "epoch_label": "Late Holocene Savanna Pastoralism, Timber Clearing & Regional Riverine Corridor Connectivity",
          "horizon_label": "Late Holocene Regional Expansion (3.0-0.12 ka)",
          "raw0_ne_median": 952887.0,
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          "runie_ry3_ne_lo95": 868410.0,
          "runie_ry3_ne_median": 1121044.0,
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          "time_midpoint_ka": 1.56,
          "time_start_ka": 3.0,
          "unrec4_ne_median": 1237633.0
        },
        {
          "active_lineages": 36,
          "biogeographic_driver": "Trans-oceanic ship-timber and potted-plant transport introducing Coptotermes and Reticulitermes bridgehead colonies",
          "coalescent_events": 0,
          "coalescent_exposure": 56.7,
          "codon12_ne_median": 1069726.0,
          "epoch_index": 5,
          "epoch_label": "19th-20th Century Maritime Timber Trade, Ballast Soil & Urban Structural Founder Bottlenecks",
          "horizon_label": "Horizon 3: Anthropocene Maritime Timber Founder Bottleneck",
          "raw0_ne_median": 1722353.0,
          "runie_ry3_ne_hi95": 1350835.0,
          "runie_ry3_ne_lo95": 762761.0,
          "runie_ry3_ne_median": 1037562.0,
          "time_end_ka": 0.03,
          "time_midpoint_ka": 0.075,
          "time_start_ka": 0.12,
          "unrec4_ne_median": 1153769.0
        },
        {
          "active_lineages": 36,
          "biogeographic_driver": "Polygynous urban supercolony proliferation paired with intense selection on cellulase, caste, and P450 detoxification loci",
          "coalescent_events": 0,
          "coalescent_exposure": 18.9,
          "codon12_ne_median": 1364823.0,
          "epoch_index": 6,
          "epoch_label": "1990-2026 Urban Heat-Island Supercolony Expansion & Termiticide/Symbiosis Selection Sweep",
          "horizon_label": "Horizon 4: Modern Urban Supercolony & Coding Sweep (1990-Present)",
          "raw0_ne_median": 2197485.0,
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          "runie_ry3_ne_lo95": 973178.0,
          "runie_ry3_ne_median": 1323786.0,
          "time_end_ka": 0.0,
          "time_midpoint_ka": 0.015,
          "time_start_ka": 0.03,
          "unrec4_ne_median": 1482640.0
        }
      ],
      "ess": 51.2299,
      "evolutionary_context": "Odontotermes / Macrotermitinae (Fungus-Comb Termites) — Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
      "isolates": [
        {
          "accession": "QB229757.1",
          "cohort_code": "L1",
          "collection_year": "11-May-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I01",
          "locality": "Pakistan: Khyber Pakhtunkhwa, University of Malakand",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes horni",
          "raw_length_bp": 611
        },
        {
          "accession": "QB181133.1",
          "cohort_code": "L1",
          "collection_year": "Jul-2026",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I02",
          "locality": "Sri Lanka: Kilinochchi",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes escherichi",
          "raw_length_bp": 626
        },
        {
          "accession": "PZ957565.1",
          "cohort_code": "L1",
          "collection_year": "22-May-2026",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I03",
          "locality": "India: Tamil Nadu, Coimbatore",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes longignathus",
          "raw_length_bp": 777
        },
        {
          "accession": "PZ674679.1",
          "cohort_code": "L1",
          "collection_year": "03-May-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I04",
          "locality": "South Africa: KwaZulu-Natal, Durban",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes badius",
          "raw_length_bp": 659
        },
        {
          "accession": "ON899909.1",
          "cohort_code": "L1",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I05",
          "locality": "India",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes obesus",
          "raw_length_bp": 617
        },
        {
          "accession": "PZ258299.1",
          "cohort_code": "L1",
          "collection_year": "16-Dec-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I06",
          "locality": "India: Gujarat, North Gujarat, SDAU, Sardarkrushinagar",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes obesus",
          "raw_length_bp": 625
        },
        {
          "accession": "PZ017201.1",
          "cohort_code": "L1",
          "collection_year": "06-Dec-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I07",
          "locality": "India: Gujarat,Sabarkatha,Vijaynagar\"\", \"\"Polo forest",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes yadevi",
          "raw_length_bp": 683
        },
        {
          "accession": "PZ017189.1",
          "cohort_code": "L1",
          "collection_year": "06-Dec-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I08",
          "locality": "India: Gujarat,Sabarkatha,Vijaynagar\"\", \"\"Polo forest",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes longignathus",
          "raw_length_bp": 570
        },
        {
          "accession": "PX968272.1",
          "cohort_code": "L1",
          "collection_year": "29-Nov-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I09",
          "locality": "India: Tamil Nadu, Coimbatore, TNAU - Insectary",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes obesus",
          "raw_length_bp": 677
        },
        {
          "accession": "PX588042.1",
          "cohort_code": "L1",
          "collection_year": "26-Nov-2024",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I10",
          "locality": "India: Siddapur, Virajpet, Kodagu, Karnataka",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes yadevi",
          "raw_length_bp": 573
        },
        {
          "accession": "PX588126.1",
          "cohort_code": "L1",
          "collection_year": "17-Jul-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I11",
          "locality": "India: Kerala, Kozhikode Lat 11.3222, Long 75.9341",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes globicola",
          "raw_length_bp": 648
        },
        {
          "accession": "PX473048.1",
          "cohort_code": "L1",
          "collection_year": "2024",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I12",
          "locality": "India: Karnataka",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes yadevi",
          "raw_length_bp": 663
        },
        {
          "accession": "PX472964.1",
          "cohort_code": "L1",
          "collection_year": "Dec-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I13",
          "locality": "India: Karnataka",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes obesus",
          "raw_length_bp": 606
        },
        {
          "accession": "PX472929.1",
          "cohort_code": "L1",
          "collection_year": "2024",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I14",
          "locality": "India: Karnataka",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes feae",
          "raw_length_bp": 660
        },
        {
          "accession": "PV069359.1",
          "cohort_code": "L1",
          "collection_year": "Jun-2024",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I15",
          "locality": "India: karnataka",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes redemanni",
          "raw_length_bp": 619
        },
        {
          "accession": "PV034270.1",
          "cohort_code": "L1",
          "collection_year": "Dec-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I16",
          "locality": "India: karnataka",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes horni",
          "raw_length_bp": 649
        },
        {
          "accession": "PP313322.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I17",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes takensis",
          "raw_length_bp": 944
        },
        {
          "accession": "PP313319.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I18",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes feae",
          "raw_length_bp": 657
        },
        {
          "accession": "PP313311.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I19",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes longignathus",
          "raw_length_bp": 657
        },
        {
          "accession": "PP313310.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I20",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes takensis",
          "raw_length_bp": 823
        },
        {
          "accession": "PP313303.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I21",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes takensis",
          "raw_length_bp": 899
        },
        {
          "accession": "PP313302.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I22",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes feae",
          "raw_length_bp": 919
        },
        {
          "accession": "PP313301.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I23",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes longignathus",
          "raw_length_bp": 657
        },
        {
          "accession": "PP313296.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I24",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes oblongatus",
          "raw_length_bp": 823
        },
        {
          "accession": "PP313147.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I25",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes takensis",
          "raw_length_bp": 677
        },
        {
          "accession": "PP313146.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I26",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes takensis",
          "raw_length_bp": 677
        },
        {
          "accession": "PP313143.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I27",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes feae",
          "raw_length_bp": 677
        },
        {
          "accession": "PP313136.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I28",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes takensis",
          "raw_length_bp": 677
        },
        {
          "accession": "PP313135.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I29",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes longignathus",
          "raw_length_bp": 677
        },
        {
          "accession": "PP313134.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I30",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes takensis",
          "raw_length_bp": 677
        },
        {
          "accession": "PP313133.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I31",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes longignathus",
          "raw_length_bp": 677
        },
        {
          "accession": "PP313129.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I32",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes feae",
          "raw_length_bp": 677
        },
        {
          "accession": "PP313127.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I33",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes takensis",
          "raw_length_bp": 609
        },
        {
          "accession": "PP313126.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I34",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes feae",
          "raw_length_bp": 677
        },
        {
          "accession": "PP313125.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I35",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes longignathus",
          "raw_length_bp": 648
        },
        {
          "accession": "PP313124.1",
          "cohort_code": "L1",
          "collection_year": "2023-08",
          "host_associate": "Field foliage collection",
          "isolate_id": "L1_I36",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
          "marker_locus": "mtDNA COX1/COII (1Ne)",
          "organism": "Odontotermes longignathus",
          "raw_length_bp": 677
        }
      ],
      "locus_name": "mtDNA COX1/COII (1Ne)",
      "msa_cpu_ms": 5957,
      "nucleotide_diversity_pi": 0.2585,
      "num_isolates": 36,
      "parsimony_informative_ry3": 341,
      "ploidy_scalar": 1.0,
      "raw0_ln_l": -6805.4004,
      "raw_bp": 24669,
      "rcfv_codon12": 0.0471,
      "rcfv_raw0": 0.0776,
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      "region_label": "Paleotropical Savanna Fungus-Gardening Deme (Maternal Haploid 1Ne Baseline)",
      "rhat": 1.7901,
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      "species": "Odontotermes / Macrotermitinae",
      "tajima_d": 9.6,
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    },
    {
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      "clade_lineage": "Odontotermes / Macrotermitinae (Fungus-Comb Termites)",
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      "cohort_source_id": "NCBI Entrez PZ946375.1..OL454817.1 (N=36)",
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        {
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          "horizon_label": "Pre-LGM Baseline (160-65 ka)",
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        {
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          "horizon_label": "Horizon 1: LGM Aridity & Forest Refugium Bottleneck (22-14 ka)",
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        },
        {
          "active_lineages": 19,
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          "epoch_label": "Early-to-Mid Holocene African Humid Period & Post-Glacial Broadleaf Forest Recolonization",
          "horizon_label": "Horizon 2: Holocene Warmth & Monsoon Forest Surge (11-3 ka)",
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        },
        {
          "active_lineages": 35,
          "biogeographic_driver": "Sustained regional colony density across tropical savannas and deadwood-rich temperate forests",
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          "epoch_label": "Late Holocene Savanna Pastoralism, Timber Clearing & Regional Riverine Corridor Connectivity",
          "horizon_label": "Late Holocene Regional Expansion (3.0-0.12 ka)",
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          "runie_ry3_ne_median": 3816320.0,
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          "unrec4_ne_median": 4213217.0
        },
        {
          "active_lineages": 35,
          "biogeographic_driver": "Trans-oceanic ship-timber and potted-plant transport introducing Coptotermes and Reticulitermes bridgehead colonies",
          "coalescent_events": 0,
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          "codon12_ne_median": 3787077.0,
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          "epoch_label": "19th-20th Century Maritime Timber Trade, Ballast Soil & Urban Structural Founder Bottlenecks",
          "horizon_label": "Horizon 3: Anthropocene Maritime Timber Founder Bottleneck",
          "raw0_ne_median": 6097525.0,
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          "runie_ry3_ne_median": 3673208.0,
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          "unrec4_ne_median": 4084607.0
        },
        {
          "active_lineages": 36,
          "biogeographic_driver": "Polygynous urban supercolony proliferation paired with intense selection on cellulase, caste, and P450 detoxification loci",
          "coalescent_events": 1,
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          "epoch_label": "1990-2026 Urban Heat-Island Supercolony Expansion & Termiticide/Symbiosis Selection Sweep",
          "horizon_label": "Horizon 4: Modern Urban Supercolony & Coding Sweep (1990-Present)",
          "raw0_ne_median": 6968600.0,
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          "runie_ry3_ne_median": 4197952.0,
          "time_end_ka": 0.0,
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          "time_start_ka": 0.03,
          "unrec4_ne_median": 4701706.0
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      ],
      "ess": 231.5858,
      "evolutionary_context": "Odontotermes / Macrotermitinae (Fungus-Comb Termites) — Paleotropical Savanna Fungus-Gardening Deme (Ribosomal Stem/Loop rDNA 4Ne)",
      "isolates": [
        {
          "accession": "PZ946375.1",
          "cohort_code": "L2",
          "collection_year": "20-Oct-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I01",
          "locality": "India: Tamil Nadu, Tamil Nadu Agricultural University, Coimbatore",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes wallonensis",
          "raw_length_bp": 490
        },
        {
          "accession": "PV487810.1",
          "cohort_code": "L2",
          "collection_year": "27-Oct-2018",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I02",
          "locality": "India: Alipurduar",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes horni",
          "raw_length_bp": 411
        },
        {
          "accession": "PV487808.1",
          "cohort_code": "L2",
          "collection_year": "01-Nov-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I03",
          "locality": "India: Alipurduar",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes adampurensis",
          "raw_length_bp": 563
        },
        {
          "accession": "PV487805.1",
          "cohort_code": "L2",
          "collection_year": "31-Oct-2018",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I04",
          "locality": "India: Jalpaiguri",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes guptai",
          "raw_length_bp": 512
        },
        {
          "accession": "PV487804.1",
          "cohort_code": "L2",
          "collection_year": "28-Oct-2018",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I05",
          "locality": "India: Alipurduar",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes boveni",
          "raw_length_bp": 570
        },
        {
          "accession": "PV487803.1",
          "cohort_code": "L2",
          "collection_year": "28-Oct-2018",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I06",
          "locality": "India: Alipurduar",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes boveni",
          "raw_length_bp": 589
        },
        {
          "accession": "PV487802.1",
          "cohort_code": "L2",
          "collection_year": "31-Oct-2018",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I07",
          "locality": "India: Jalpaiguri",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes giriensis",
          "raw_length_bp": 554
        },
        {
          "accession": "PV487801.1",
          "cohort_code": "L2",
          "collection_year": "15-Mar-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I08",
          "locality": "India: Purulia",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes giriensis",
          "raw_length_bp": 564
        },
        {
          "accession": "PV487800.1",
          "cohort_code": "L2",
          "collection_year": "18-Apr-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I09",
          "locality": "India: Purba Medinipore",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes hainanensis",
          "raw_length_bp": 526
        },
        {
          "accession": "PV487799.1",
          "cohort_code": "L2",
          "collection_year": "18-Apr-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I10",
          "locality": "India: Purba Medinipore",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes hainanensis",
          "raw_length_bp": 516
        },
        {
          "accession": "PV487798.1",
          "cohort_code": "L2",
          "collection_year": "22-Nov-2017",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I11",
          "locality": "India: Alipurduar",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes horai",
          "raw_length_bp": 411
        },
        {
          "accession": "PV487797.1",
          "cohort_code": "L2",
          "collection_year": "05-May-2018",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I12",
          "locality": "India: Purba Medinipore",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes kapuri",
          "raw_length_bp": 414
        },
        {
          "accession": "PV487796.1",
          "cohort_code": "L2",
          "collection_year": "14-Mar-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I13",
          "locality": "India: Purulia",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes obesus",
          "raw_length_bp": 530
        },
        {
          "accession": "PV487795.1",
          "cohort_code": "L2",
          "collection_year": "06-May-2018",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I14",
          "locality": "India: Purba Medinipore",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes obesus",
          "raw_length_bp": 526
        },
        {
          "accession": "PV487794.1",
          "cohort_code": "L2",
          "collection_year": "26-Oct-2018",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I15",
          "locality": "India: Alipurduar",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes parvidens",
          "raw_length_bp": 515
        },
        {
          "accession": "PV487793.1",
          "cohort_code": "L2",
          "collection_year": "11-Mar-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I16",
          "locality": "India: Purulia",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes redemanni",
          "raw_length_bp": 522
        },
        {
          "accession": "PX606907.1",
          "cohort_code": "L2",
          "collection_year": "02-Jun-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I17",
          "locality": "India: Kerala, Karivellur",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes sp.",
          "raw_length_bp": 505
        },
        {
          "accession": "PX588563.1",
          "cohort_code": "L2",
          "collection_year": "02-Jun-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I18",
          "locality": "India: Kerala, Karivellur",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes feae",
          "raw_length_bp": 508
        },
        {
          "accession": "PV436947.1",
          "cohort_code": "L2",
          "collection_year": "16-Feb-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I19",
          "locality": "India: Anatharajupeta, Kolur, AP",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes formosanus",
          "raw_length_bp": 857
        },
        {
          "accession": "PV034042.1",
          "cohort_code": "L2",
          "collection_year": "Aug-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I20",
          "locality": "India: karnataka",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes horni",
          "raw_length_bp": 433
        },
        {
          "accession": "PQ035974.1",
          "cohort_code": "L2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I21",
          "locality": "India",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes profeae",
          "raw_length_bp": 457
        },
        {
          "accession": "PQ035973.1",
          "cohort_code": "L2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I22",
          "locality": "India",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes profeae",
          "raw_length_bp": 483
        },
        {
          "accession": "PP990756.1",
          "cohort_code": "L2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I23",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Ribosomal Stem/Loop rDNA 4Ne)",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes assmuthi",
          "raw_length_bp": 523
        },
        {
          "accession": "PP990755.1",
          "cohort_code": "L2",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I24",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Ribosomal Stem/Loop rDNA 4Ne)",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes assmuthi",
          "raw_length_bp": 666
        },
        {
          "accession": "OR817725.1",
          "cohort_code": "L2",
          "collection_year": "2022",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I25",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Ribosomal Stem/Loop rDNA 4Ne)",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes sp.",
          "raw_length_bp": 402
        },
        {
          "accession": "OQ437297.1",
          "cohort_code": "L2",
          "collection_year": "29-Oct-2018",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I26",
          "locality": "India: West Bengal",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes horni",
          "raw_length_bp": 439
        },
        {
          "accession": "OQ437296.1",
          "cohort_code": "L2",
          "collection_year": "18-Nov-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I27",
          "locality": "India: West Bengal",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes feae",
          "raw_length_bp": 566
        },
        {
          "accession": "OQ437295.1",
          "cohort_code": "L2",
          "collection_year": "15-Apr-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I28",
          "locality": "India: West Bengal",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes feae",
          "raw_length_bp": 508
        },
        {
          "accession": "OQ437294.1",
          "cohort_code": "L2",
          "collection_year": "18-Apr-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I29",
          "locality": "India: West Bengal",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes bellahunisensis",
          "raw_length_bp": 527
        },
        {
          "accession": "OQ437293.1",
          "cohort_code": "L2",
          "collection_year": "17-Mar-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I30",
          "locality": "India: West Bengal",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes guptai",
          "raw_length_bp": 675
        },
        {
          "accession": "OM262386.1",
          "cohort_code": "L2",
          "collection_year": "16-Oct-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I31",
          "locality": "India",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes giriensis",
          "raw_length_bp": 459
        },
        {
          "accession": "OM241453.1",
          "cohort_code": "L2",
          "collection_year": "07-Sep-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I32",
          "locality": "India",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes feae",
          "raw_length_bp": 457
        },
        {
          "accession": "OL721753.1",
          "cohort_code": "L2",
          "collection_year": "04-Sep-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I33",
          "locality": "India",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes assmuthi",
          "raw_length_bp": 430
        },
        {
          "accession": "OL721750.1",
          "cohort_code": "L2",
          "collection_year": "30-Aug-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I34",
          "locality": "India",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes obesus",
          "raw_length_bp": 392
        },
        {
          "accession": "OL454829.1",
          "cohort_code": "L2",
          "collection_year": "29-Aug-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I35",
          "locality": "India",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes parvidens",
          "raw_length_bp": 466
        },
        {
          "accession": "OL454817.1",
          "cohort_code": "L2",
          "collection_year": "06-Aug-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L2_I36",
          "locality": "India",
          "marker_locus": "Ribosomal 16S/12S rDNA (4Ne)",
          "organism": "Odontotermes gurdaspurensis",
          "raw_length_bp": 456
        }
      ],
      "locus_name": "Ribosomal 16S/12S rDNA (4Ne)",
      "msa_cpu_ms": 3859,
      "nucleotide_diversity_pi": 0.1689,
      "num_isolates": 36,
      "parsimony_informative_ry3": 330,
      "ploidy_scalar": 4.0,
      "raw0_ln_l": -5823.3926,
      "raw_bp": 18422,
      "rcfv_codon12": 0.0586,
      "rcfv_raw0": 0.1088,
      "rcfv_ry3": 0.0096,
      "rcfv_unrecoded": 0.11,
      "region_label": "Paleotropical Savanna Fungus-Gardening Deme (Ribosomal Stem/Loop rDNA 4Ne)",
      "rhat": 1.0027,
      "runie_ry3_marginal_ln_l": -5208.7926,
      "runie_ry3_post_mean_ln_l": -5207.0426,
      "species": "Odontotermes / Macrotermitinae",
      "tajima_d": -0.0458,
      "total_cpu_ms": 3969,
      "tree_mcmc_cpu_ms": 110,
      "unrec4_ln_l": -5385.5926,
      "watterson_theta": 0.1709
    },
    {
      "aligned_cols_bp": 2647,
      "axis_group": "Same-Region Multi-Locus (Fig 4B: Paleotropical & Holarctic)",
      "clade_lineage": "Odontotermes / Termitoidae (Lignocellulase Sweep)",
      "codon12_ln_l": -31561.3152,
      "cohort_code": "L3",
      "cohort_source_id": "NCBI Entrez PZ247472.1..KU170546.1 (N=36)",
      "distinct_patterns_ry3": 2191,
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        {
          "active_lineages": 9,
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          "coalescent_events": 8,
          "coalescent_exposure": 1488.8586,
          "codon12_ne_median": 189353.0,
          "epoch_index": 1,
          "epoch_label": "Late Pleistocene MIS 5e Interglacial Tropical Rainforest & Temperate Broadleaf Expansion",
          "horizon_label": "Pre-LGM Baseline (160-65 ka)",
          "raw0_ne_median": 156111.0,
          "runie_ry3_ne_hi95": 229292.0,
          "runie_ry3_ne_lo95": 143632.0,
          "runie_ry3_ne_median": 183660.0,
          "time_end_ka": 65.0,
          "time_midpoint_ka": 112.5,
          "time_start_ka": 160.0,
          "unrec4_ne_median": 198353.0
        },
        {
          "active_lineages": 18,
          "biogeographic_driver": "Pleistocene cooling and savanna desiccation contracting subterranean and canopy termite populations into glacial refugia",
          "coalescent_events": 9,
          "coalescent_exposure": 4093.6877,
          "codon12_ne_median": 173123.0,
          "epoch_index": 2,
          "epoch_label": "Last Glacial Maximum (LGM) Aridity, Boreal Glaciation & Rainforest Refugial Fragmentation",
          "horizon_label": "Horizon 1: LGM Aridity & Forest Refugium Bottleneck (22-14 ka)",
          "raw0_ne_median": 142730.0,
          "runie_ry3_ne_hi95": 209301.0,
          "runie_ry3_ne_lo95": 131617.0,
          "runie_ry3_ne_median": 167918.0,
          "time_end_ka": 14.0,
          "time_midpoint_ka": 39.5,
          "time_start_ka": 65.0,
          "unrec4_ne_median": 182695.0
        },
        {
          "active_lineages": 21,
          "biogeographic_driver": "Post-glacial reforestation of North America/East Asia and monsoon expansion of Paleotropical fungus-growing mounds",
          "coalescent_events": 3,
          "coalescent_exposure": 1954.1118,
          "codon12_ne_median": 197469.0,
          "epoch_index": 3,
          "epoch_label": "Early-to-Mid Holocene African Humid Period & Post-Glacial Broadleaf Forest Recolonization",
          "horizon_label": "Horizon 2: Holocene Warmth & Monsoon Forest Surge (11-3 ka)",
          "raw0_ne_median": 162802.0,
          "runie_ry3_ne_hi95": 242552.0,
          "runie_ry3_ne_lo95": 146778.0,
          "runie_ry3_ne_median": 191532.0,
          "time_end_ka": 3.0,
          "time_midpoint_ka": 8.5,
          "time_start_ka": 14.0,
          "unrec4_ne_median": 209919.0
        },
        {
          "active_lineages": 28,
          "biogeographic_driver": "Sustained regional colony density across tropical savannas and deadwood-rich temperate forests",
          "coalescent_events": 7,
          "coalescent_exposure": 792.9183,
          "codon12_ne_median": 205584.0,
          "epoch_index": 4,
          "epoch_label": "Late Holocene Savanna Pastoralism, Timber Clearing & Regional Riverine Corridor Connectivity",
          "horizon_label": "Late Holocene Regional Expansion (3.0-0.12 ka)",
          "raw0_ne_median": 169493.0,
          "runie_ry3_ne_hi95": 249413.0,
          "runie_ry3_ne_lo95": 155534.0,
          "runie_ry3_ne_median": 199403.0,
          "time_end_ka": 0.12,
          "time_midpoint_ka": 1.56,
          "time_start_ka": 3.0,
          "unrec4_ne_median": 220141.0
        },
        {
          "active_lineages": 35,
          "biogeographic_driver": "Trans-oceanic ship-timber and potted-plant transport introducing Coptotermes and Reticulitermes bridgehead colonies",
          "coalescent_events": 7,
          "coalescent_exposure": 43.4427,
          "codon12_ne_median": 56806.0,
          "epoch_index": 5,
          "epoch_label": "19th-20th Century Maritime Timber Trade, Ballast Soil & Urban Structural Founder Bottlenecks",
          "horizon_label": "Horizon 3: Anthropocene Maritime Timber Founder Bottleneck",
          "raw0_ne_median": 91463.0,
          "runie_ry3_ne_hi95": 68917.0,
          "runie_ry3_ne_lo95": 42976.0,
          "runie_ry3_ne_median": 55098.0,
          "time_end_ka": 0.03,
          "time_midpoint_ka": 0.075,
          "time_start_ka": 0.12,
          "unrec4_ne_median": 61269.0
        },
        {
          "active_lineages": 36,
          "biogeographic_driver": "Polygynous urban supercolony proliferation paired with intense selection on cellulase, caste, and P450 detoxification loci",
          "coalescent_events": 1,
          "coalescent_exposure": 18.188,
          "codon12_ne_median": 16230.0,
          "epoch_index": 6,
          "epoch_label": "1990-2026 Urban Heat-Island Supercolony Expansion & Termiticide/Symbiosis Selection Sweep",
          "horizon_label": "Horizon 4: Modern Urban Supercolony & Coding Sweep (1990-Present)",
          "raw0_ne_median": 26132.0,
          "runie_ry3_ne_hi95": 20216.0,
          "runie_ry3_ne_lo95": 11818.0,
          "runie_ry3_ne_median": 15742.0,
          "time_end_ka": 0.0,
          "time_midpoint_ka": 0.015,
          "time_start_ka": 0.03,
          "unrec4_ne_median": 17631.0
        }
      ],
      "ess": 50.2969,
      "evolutionary_context": "Odontotermes / Termitoidae (Lignocellulase Sweep) — Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
      "isolates": [
        {
          "accession": "PZ247472.1",
          "cohort_code": "L3",
          "collection_year": "KBCPBGKF_33952",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I01",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Nasutitermes aquilinus",
          "raw_length_bp": 1680
        },
        {
          "accession": "PZ247468.1",
          "cohort_code": "L3",
          "collection_year": "KBCPBGKF_22703",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I02",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Nasutitermes aquilinus",
          "raw_length_bp": 1719
        },
        {
          "accession": "PZ247470.1",
          "cohort_code": "L3",
          "collection_year": "KBCPBGKF_14422",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I03",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Nasutitermes aquilinus",
          "raw_length_bp": 1104
        },
        {
          "accession": "PZ247471.1",
          "cohort_code": "L3",
          "collection_year": "KBCPBGKF_00253",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I04",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Nasutitermes aquilinus",
          "raw_length_bp": 1713
        },
        {
          "accession": "PZ247469.1",
          "cohort_code": "L3",
          "collection_year": "AFHCADON_14335",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I05",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Cortaritermes fulviceps",
          "raw_length_bp": 1026
        },
        {
          "accession": "PX683729.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I06",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 1296
        },
        {
          "accession": "PX138769.1",
          "cohort_code": "L3",
          "collection_year": "30-Mar-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I07",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 1299
        },
        {
          "accession": "PX138768.1",
          "cohort_code": "L3",
          "collection_year": "30-Mar-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I08",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 1299
        },
        {
          "accession": "PX138767.1",
          "cohort_code": "L3",
          "collection_year": "30-Mar-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I09",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 1299
        },
        {
          "accession": "PX138766.1",
          "cohort_code": "L3",
          "collection_year": "30-Mar-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I10",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 1299
        },
        {
          "accession": "PX138765.1",
          "cohort_code": "L3",
          "collection_year": "30-Mar-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I11",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 1299
        },
        {
          "accession": "PX138764.1",
          "cohort_code": "L3",
          "collection_year": "30-Mar-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I12",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 1299
        },
        {
          "accession": "PX138763.1",
          "cohort_code": "L3",
          "collection_year": "30-Mar-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I13",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 1299
        },
        {
          "accession": "PX138761.1",
          "cohort_code": "L3",
          "collection_year": "30-Mar-2023",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I14",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 1299
        },
        {
          "accession": "MN944397.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I15",
          "locality": "China",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Reticulitermes perilucifugus",
          "raw_length_bp": 1347
        },
        {
          "accession": "MN944396.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I16",
          "locality": "China",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Reticulitermes perilucifugus",
          "raw_length_bp": 1431
        },
        {
          "accession": "MN944395.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I17",
          "locality": "China",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Reticulitermes perilucifugus",
          "raw_length_bp": 1485
        },
        {
          "accession": "MN944394.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I18",
          "locality": "China",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Reticulitermes perilucifugus",
          "raw_length_bp": 1326
        },
        {
          "accession": "MN944393.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I19",
          "locality": "China",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Reticulitermes perilucifugus",
          "raw_length_bp": 1326
        },
        {
          "accession": "XM_023849161.2",
          "cohort_code": "L3",
          "collection_year": "2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I20",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 1509
        },
        {
          "accession": "XM_023849162.2",
          "cohort_code": "L3",
          "collection_year": "2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I21",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 1504
        },
        {
          "accession": "XM_023862708.2",
          "cohort_code": "L3",
          "collection_year": "2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I22",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 1750
        },
        {
          "accession": "XM_023860829.2",
          "cohort_code": "L3",
          "collection_year": "2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I23",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 2271
        },
        {
          "accession": "XM_023860828.2",
          "cohort_code": "L3",
          "collection_year": "2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I24",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 2450
        },
        {
          "accession": "XM_023871259.1",
          "cohort_code": "L3",
          "collection_year": "2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I25",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 1179
        },
        {
          "accession": "XM_023862711.1",
          "cohort_code": "L3",
          "collection_year": "2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I26",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 1246
        },
        {
          "accession": "XM_023862709.1",
          "cohort_code": "L3",
          "collection_year": "2012",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I27",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Cryptotermes secundus",
          "raw_length_bp": 1430
        },
        {
          "accession": "CB518298.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I28",
          "locality": "Vector: Uni-ZAP XR",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 584
        },
        {
          "accession": "CB518297.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I29",
          "locality": "Vector: Uni-ZAP XR",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 505
        },
        {
          "accession": "CB518296.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I30",
          "locality": "Vector: Uni-ZAP XR",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 423
        },
        {
          "accession": "CB518295.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I31",
          "locality": "Vector: Uni-ZAP XR",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 615
        },
        {
          "accession": "BQ788173.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I32",
          "locality": "Vector: Uni-ZAP XR",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Reticulitermes flavipes",
          "raw_length_bp": 487
        },
        {
          "accession": "LT996412.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I33",
          "locality": "Brazil",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Cornitermes cumulans",
          "raw_length_bp": 522
        },
        {
          "accession": "KT992464.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I34",
          "locality": "China: Guangdong, Guangzhou",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 2195
        },
        {
          "accession": "KY228991.1",
          "cohort_code": "L3",
          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I35",
          "locality": "China: Guangdong, Guangzhou",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Coptotermes formosanus",
          "raw_length_bp": 1966
        },
        {
          "accession": "KU170546.1",
          "cohort_code": "L3",
          "collection_year": "14-Nov-2008",
          "host_associate": "Field foliage collection",
          "isolate_id": "L3_I36",
          "locality": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
          "marker_locus": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
          "organism": "Microcerotermes annandalei",
          "raw_length_bp": 1419
        }
      ],
      "locus_name": "Nuclear GH9 Endoglucanase / Beta-Glucosidase Locus",
      "msa_cpu_ms": 18518,
      "nucleotide_diversity_pi": 0.5378,
      "num_isolates": 36,
      "parsimony_informative_ry3": 1895,
      "ploidy_scalar": 0.22,
      "raw0_ln_l": -32139.5152,
      "raw_bp": 47900,
      "rcfv_codon12": 0.0608,
      "rcfv_raw0": 0.1021,
      "rcfv_ry3": 0.0157,
      "rcfv_unrecoded": 0.1035,
      "region_label": "Paleotropical Savanna Fungus-Gardening Deme (Endogenous GH9 Cellulase / Symbiosis Sweep Locus)",
      "rhat": 3.9998,
      "runie_ry3_marginal_ln_l": -31524.9152,
      "runie_ry3_post_mean_ln_l": -31389.1775,
      "species": "Odontotermes / Termitoidae",
      "tajima_d": 5.6141,
      "total_cpu_ms": 18828,
      "tree_mcmc_cpu_ms": 310,
      "unrec4_ln_l": -31701.7152,
      "watterson_theta": 0.2176
    },
    {
      "aligned_cols_bp": 628,
      "axis_group": "Same-Region Multi-Locus (Fig 4B: Paleotropical & Holarctic)",
      "clade_lineage": "Reticulitermes spp. (Temperate Subterranean Termites)",
      "codon12_ln_l": -1735.4834,
      "cohort_code": "L4",
      "cohort_source_id": "NCBI Entrez PV121457.1..PV121422.1 (N=36)",
      "distinct_patterns_ry3": 82,
      "epochs": [
        {
          "active_lineages": 9,
          "biogeographic_driver": "Warm interglacial forest and savanna gallery connectivity across Paleotropical, Neotropical, and Holarctic basins",
          "coalescent_events": 8,
          "coalescent_exposure": 2236.134,
          "codon12_ne_median": 516420.0,
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          "epoch_label": "Late Pleistocene MIS 5e Interglacial Tropical Rainforest & Temperate Broadleaf Expansion",
          "horizon_label": "Pre-LGM Baseline (160-65 ka)",
          "raw0_ne_median": 425758.0,
          "runie_ry3_ne_hi95": 625344.0,
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          "runie_ry3_ne_median": 500892.0,
          "time_end_ka": 65.0,
          "time_midpoint_ka": 112.5,
          "time_start_ka": 160.0,
          "unrec4_ne_median": 540963.0
        },
        {
          "active_lineages": 13,
          "biogeographic_driver": "Pleistocene cooling and savanna desiccation contracting subterranean and canopy termite populations into glacial refugia",
          "coalescent_events": 4,
          "coalescent_exposure": 2430.1092,
          "codon12_ne_median": 270506.0,
          "epoch_index": 2,
          "epoch_label": "Last Glacial Maximum (LGM) Aridity, Boreal Glaciation & Rainforest Refugial Fragmentation",
          "horizon_label": "Horizon 1: LGM Aridity & Forest Refugium Bottleneck (22-14 ka)",
          "raw0_ne_median": 223016.0,
          "runie_ry3_ne_hi95": 330864.0,
          "runie_ry3_ne_lo95": 202291.0,
          "runie_ry3_ne_median": 262372.0,
          "time_end_ka": 14.0,
          "time_midpoint_ka": 39.5,
          "time_start_ka": 65.0,
          "unrec4_ne_median": 285461.0
        },
        {
          "active_lineages": 21,
          "biogeographic_driver": "Post-glacial reforestation of North America/East Asia and monsoon expansion of Paleotropical fungus-growing mounds",
          "coalescent_events": 8,
          "coalescent_exposure": 1252.4799,
          "codon12_ne_median": 922178.0,
          "epoch_index": 3,
          "epoch_label": "Early-to-Mid Holocene African Humid Period & Post-Glacial Broadleaf Forest Recolonization",
          "horizon_label": "Horizon 2: Holocene Warmth & Monsoon Forest Surge (11-3 ka)",
          "raw0_ne_median": 760283.0,
          "runie_ry3_ne_hi95": 1116685.0,
          "runie_ry3_ne_lo95": 699507.0,
          "runie_ry3_ne_median": 894450.0,
          "time_end_ka": 3.0,
          "time_midpoint_ka": 8.5,
          "time_start_ka": 14.0,
          "unrec4_ne_median": 980317.0
        },
        {
          "active_lineages": 36,
          "biogeographic_driver": "Sustained regional colony density across tropical savannas and deadwood-rich temperate forests",
          "coalescent_events": 15,
          "coalescent_exposure": 1088.1906,
          "codon12_ne_median": 1118909.0,
          "epoch_index": 4,
          "epoch_label": "Late Holocene Savanna Pastoralism, Timber Clearing & Regional Riverine Corridor Connectivity",
          "horizon_label": "Late Holocene Regional Expansion (3.0-0.12 ka)",
          "raw0_ne_median": 922476.0,
          "runie_ry3_ne_hi95": 1343970.0,
          "runie_ry3_ne_lo95": 858332.0,
          "runie_ry3_ne_median": 1085266.0,
          "time_end_ka": 0.12,
          "time_midpoint_ka": 1.56,
          "time_start_ka": 3.0,
          "unrec4_ne_median": 1198134.0
        },
        {
          "active_lineages": 36,
          "biogeographic_driver": "Trans-oceanic ship-timber and potted-plant transport introducing Coptotermes and Reticulitermes bridgehead colonies",
          "coalescent_events": 0,
          "coalescent_exposure": 56.7,
          "codon12_ne_median": 1032839.0,
          "epoch_index": 5,
          "epoch_label": "19th-20th Century Maritime Timber Trade, Ballast Soil & Urban Structural Founder Bottlenecks",
          "horizon_label": "Horizon 3: Anthropocene Maritime Timber Founder Bottleneck",
          "raw0_ne_median": 1662961.0,
          "runie_ry3_ne_hi95": 1304255.0,
          "runie_ry3_ne_lo95": 736459.0,
          "runie_ry3_ne_median": 1001784.0,
          "time_end_ka": 0.03,
          "time_midpoint_ka": 0.075,
          "time_start_ka": 0.12,
          "unrec4_ne_median": 1113984.0
        },
        {
          "active_lineages": 36,
          "biogeographic_driver": "Polygynous urban supercolony proliferation paired with intense selection on cellulase, caste, and P450 detoxification loci",
          "coalescent_events": 0,
          "coalescent_exposure": 18.9,
          "codon12_ne_median": 1352528.0,
          "epoch_index": 6,
          "epoch_label": "1990-2026 Urban Heat-Island Supercolony Expansion & Termiticide/Symbiosis Selection Sweep",
          "horizon_label": "Horizon 4: Modern Urban Supercolony & Coding Sweep (1990-Present)",
          "raw0_ne_median": 2177688.0,
          "runie_ry3_ne_hi95": 1707953.0,
          "runie_ry3_ne_lo95": 964410.0,
          "runie_ry3_ne_median": 1311860.0,
          "time_end_ka": 0.0,
          "time_midpoint_ka": 0.015,
          "time_start_ka": 0.03,
          "unrec4_ne_median": 1469283.0
        }
      ],
      "ess": 462.9134,
      "evolutionary_context": "Reticulitermes spp. (Temperate Subterranean Termites) — Holarctic Temperate Subterranean Forest Deme (Maternal Haploid 1Ne Baseline)",
      "isolates": [
        {
          "accession": "PV121457.1",
          "cohort_code": "L4",
          "collection_year": "31-Jul-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I01",
          "locality": "USA: Placerville, El Dorado Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes hesperus",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121456.1",
          "cohort_code": "L4",
          "collection_year": "31-Jul-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I02",
          "locality": "USA: Placerville, El Dorado Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121455.1",
          "cohort_code": "L4",
          "collection_year": "26-Jun-2001",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I03",
          "locality": "USA: Placerville, El Dorado Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121454.1",
          "cohort_code": "L4",
          "collection_year": "26-Jun-2001",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I04",
          "locality": "USA: Placerville, El Dorado Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121453.1",
          "cohort_code": "L4",
          "collection_year": "03-Apr-2001",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I05",
          "locality": "USA: Placerville, El Dorado Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes hesperus",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121452.1",
          "cohort_code": "L4",
          "collection_year": "26-Jun-2001",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I06",
          "locality": "USA: Placerville, El Dorado Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121451.1",
          "cohort_code": "L4",
          "collection_year": "31-Jul-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I07",
          "locality": "USA: Placerville, El Dorado Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121450.1",
          "cohort_code": "L4",
          "collection_year": "31-Jul-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I08",
          "locality": "USA: Placerville, El Dorado Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121449.1",
          "cohort_code": "L4",
          "collection_year": "30-Sep-2003",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I09",
          "locality": "USA: Canyonlands, UT",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes tibialis",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121448.1",
          "cohort_code": "L4",
          "collection_year": "30-Apr-2001",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I10",
          "locality": "USA: Novato, Marin Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121447.1",
          "cohort_code": "L4",
          "collection_year": "16-Oct-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I11",
          "locality": "USA: Rialto, San Bernardino Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp. r TCC-2025",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121446.1",
          "cohort_code": "L4",
          "collection_year": "28-Aug-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I12",
          "locality": "USA: Carpenteria, Santa Barbara Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp. r TCC-2025",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121445.1",
          "cohort_code": "L4",
          "collection_year": "28-Aug-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I13",
          "locality": "USA: Baldwin Park, Los Angeles Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp. r TCC-2025",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121444.1",
          "cohort_code": "L4",
          "collection_year": "28-Aug-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I14",
          "locality": "USA: Baldwin Park, Los Angeles Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes hesperus",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121443.1",
          "cohort_code": "L4",
          "collection_year": "22-Aug-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I15",
          "locality": "USA: Los Angeles, Los Angeles Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes hesperus",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121442.1",
          "cohort_code": "L4",
          "collection_year": "22-Jan-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I16",
          "locality": "USA: University of California Riverside, Riverside Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp. r TCC-2025",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121441.1",
          "cohort_code": "L4",
          "collection_year": "24-Jan-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I17",
          "locality": "USA: Martinez, Contra Costa Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121440.1",
          "cohort_code": "L4",
          "collection_year": "10-Apr-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I18",
          "locality": "USA: Martinez, Contra Costa Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes hesperus",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121439.1",
          "cohort_code": "L4",
          "collection_year": "25-Jan-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I19",
          "locality": "USA: Alameda, Alameda Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121438.1",
          "cohort_code": "L4",
          "collection_year": "15-Nov-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I20",
          "locality": "USA: San Mateo, San Mateo Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121437.1",
          "cohort_code": "L4",
          "collection_year": "14-Dec-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I21",
          "locality": "USA: Lafayette, Contra Costa Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121436.1",
          "cohort_code": "L4",
          "collection_year": "14-Nov-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I22",
          "locality": "USA: Lafayette, Contra Costa Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121435.1",
          "cohort_code": "L4",
          "collection_year": "14-Nov-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I23",
          "locality": "USA: Martinez, Contra Costa Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121434.1",
          "cohort_code": "L4",
          "collection_year": "29-Nov-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I24",
          "locality": "USA: Bolinas, Marin Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121433.1",
          "cohort_code": "L4",
          "collection_year": "21-Sep-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I25",
          "locality": "USA: Richmond, Contra Costa Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121432.1",
          "cohort_code": "L4",
          "collection_year": "24-Apr-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I26",
          "locality": "USA: Diablo Foothill Regional Park, Contra Costa Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes hesperus",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121431.1",
          "cohort_code": "L4",
          "collection_year": "16-Dec-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I27",
          "locality": "USA: Alameda, Alameda Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121430.1",
          "cohort_code": "L4",
          "collection_year": "16-Dec-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I28",
          "locality": "USA: Hayward, Alameda Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121429.1",
          "cohort_code": "L4",
          "collection_year": "02-Dec-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I29",
          "locality": "USA: Richmond, Contra Costa Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121428.1",
          "cohort_code": "L4",
          "collection_year": "16-Dec-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I30",
          "locality": "USA: Hayward, Alameda Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121427.1",
          "cohort_code": "L4",
          "collection_year": "10-Apr-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I31",
          "locality": "USA: Richmond, Contra Costa Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121426.1",
          "cohort_code": "L4",
          "collection_year": "01-Aug-2024",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I32",
          "locality": "USA: Shaw St., Los Alamos, Santa Barbara Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp. r TCC-2025",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121425.1",
          "cohort_code": "L4",
          "collection_year": "01-Aug-2024",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I33",
          "locality": "USA: Ca-41 Parking, Atascadero, San Luis Obispo Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes hesperus",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121424.1",
          "cohort_code": "L4",
          "collection_year": "31-Jul-2024",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I34",
          "locality": "USA: Camp Roberts, Bradley, Monterey Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes hesperus",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121423.1",
          "cohort_code": "L4",
          "collection_year": "31-Jul-2024",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I35",
          "locality": "USA: Toro County Park, Salinas, Monterey Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes hesperus",
          "raw_length_bp": 628
        },
        {
          "accession": "PV121422.1",
          "cohort_code": "L4",
          "collection_year": "30-Jul-2024",
          "host_associate": "Field foliage collection",
          "isolate_id": "L4_I36",
          "locality": "USA: San Lorenzo County Park, King City, Monterey Co., CA",
          "marker_locus": "mtDNA COX1 (1Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 628
        }
      ],
      "locus_name": "mtDNA COX1 (1Ne)",
      "msa_cpu_ms": 5674,
      "nucleotide_diversity_pi": 0.0469,
      "num_isolates": 36,
      "parsimony_informative_ry3": 79,
      "ploidy_scalar": 1.0,
      "raw0_ln_l": -2313.6834,
      "raw_bp": 22608,
      "rcfv_codon12": 0.0065,
      "rcfv_raw0": 0.0252,
      "rcfv_ry3": 0.002,
      "rcfv_unrecoded": 0.0116,
      "region_label": "Holarctic Temperate Subterranean Forest Deme (Maternal Haploid 1Ne Baseline)",
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      "species": "Reticulitermes spp.",
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    },
    {
      "aligned_cols_bp": 931,
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      "clade_lineage": "Reticulitermes spp. (Temperate Subterranean Termites)",
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      "cohort_source_id": "NCBI Entrez OR231805.1..OR231770.1 (N=36)",
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        {
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        {
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          "horizon_label": "Horizon 1: LGM Aridity & Forest Refugium Bottleneck (22-14 ka)",
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        },
        {
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          "epoch_label": "Early-to-Mid Holocene African Humid Period & Post-Glacial Broadleaf Forest Recolonization",
          "horizon_label": "Horizon 2: Holocene Warmth & Monsoon Forest Surge (11-3 ka)",
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        {
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          "epoch_label": "Late Holocene Savanna Pastoralism, Timber Clearing & Regional Riverine Corridor Connectivity",
          "horizon_label": "Late Holocene Regional Expansion (3.0-0.12 ka)",
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          "unrec4_ne_median": 4107887.0
        },
        {
          "active_lineages": 36,
          "biogeographic_driver": "Trans-oceanic ship-timber and potted-plant transport introducing Coptotermes and Reticulitermes bridgehead colonies",
          "coalescent_events": 0,
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          "codon12_ne_median": 3639529.0,
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          "epoch_label": "19th-20th Century Maritime Timber Trade, Ballast Soil & Urban Structural Founder Bottlenecks",
          "horizon_label": "Horizon 3: Anthropocene Maritime Timber Founder Bottleneck",
          "raw0_ne_median": 5859959.0,
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        },
        {
          "active_lineages": 36,
          "biogeographic_driver": "Polygynous urban supercolony proliferation paired with intense selection on cellulase, caste, and P450 detoxification loci",
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          "codon12_ne_median": 4229723.0,
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          "epoch_label": "1990-2026 Urban Heat-Island Supercolony Expansion & Termiticide/Symbiosis Selection Sweep",
          "horizon_label": "Horizon 4: Modern Urban Supercolony & Coding Sweep (1990-Present)",
          "raw0_ne_median": 6810223.0,
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      ],
      "ess": 346.3215,
      "evolutionary_context": "Reticulitermes spp. (Temperate Subterranean Termites) — Holarctic Temperate Subterranean Forest Deme (Ribosomal 16S/28S/ITS Spacer 4Ne)",
      "isolates": [
        {
          "accession": "OR231805.1",
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          "collection_year": "31-Jul-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I01",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
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          "raw_length_bp": 923
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        {
          "accession": "OR231804.1",
          "cohort_code": "L5",
          "collection_year": "31-Jul-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I02",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
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          "raw_length_bp": 924
        },
        {
          "accession": "OR231803.1",
          "cohort_code": "L5",
          "collection_year": "26-Jun-2001",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I03",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 924
        },
        {
          "accession": "OR231802.1",
          "cohort_code": "L5",
          "collection_year": "26-Jun-2001",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I04",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 924
        },
        {
          "accession": "OR231801.1",
          "cohort_code": "L5",
          "collection_year": "03-Apr-2001",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I05",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 923
        },
        {
          "accession": "OR231800.1",
          "cohort_code": "L5",
          "collection_year": "03-Apr-2001",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I06",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 923
        },
        {
          "accession": "OR231799.1",
          "cohort_code": "L5",
          "collection_year": "26-Jun-2001",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I07",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 924
        },
        {
          "accession": "OR231798.1",
          "cohort_code": "L5",
          "collection_year": "31-Jul-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I08",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 924
        },
        {
          "accession": "OR231797.1",
          "cohort_code": "L5",
          "collection_year": "31-Jul-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I09",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 924
        },
        {
          "accession": "OR231796.1",
          "cohort_code": "L5",
          "collection_year": "30-Sep-2003",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I10",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 921
        },
        {
          "accession": "OR231795.1",
          "cohort_code": "L5",
          "collection_year": "30-Apr-2001",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I11",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 928
        },
        {
          "accession": "OR231794.1",
          "cohort_code": "L5",
          "collection_year": "16-Oct-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I12",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 924
        },
        {
          "accession": "OR231793.1",
          "cohort_code": "L5",
          "collection_year": "28-Aug-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I13",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 924
        },
        {
          "accession": "OR231792.1",
          "cohort_code": "L5",
          "collection_year": "28-Aug-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I14",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 924
        },
        {
          "accession": "OR231791.1",
          "cohort_code": "L5",
          "collection_year": "28-Aug-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I15",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 924
        },
        {
          "accession": "OR231790.1",
          "cohort_code": "L5",
          "collection_year": "22-Aug-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I16",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 924
        },
        {
          "accession": "OR231789.1",
          "cohort_code": "L5",
          "collection_year": "02-Aug-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I17",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 923
        },
        {
          "accession": "OR231788.1",
          "cohort_code": "L5",
          "collection_year": "22-Jan-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I18",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 924
        },
        {
          "accession": "OR231787.1",
          "cohort_code": "L5",
          "collection_year": "24-Jan-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I19",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 930
        },
        {
          "accession": "OR231786.1",
          "cohort_code": "L5",
          "collection_year": "24-Apr-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I20",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 923
        },
        {
          "accession": "OR231785.1",
          "cohort_code": "L5",
          "collection_year": "11-Apr-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I21",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 923
        },
        {
          "accession": "OR231784.1",
          "cohort_code": "L5",
          "collection_year": "10-Apr-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I22",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 923
        },
        {
          "accession": "OR231783.1",
          "cohort_code": "L5",
          "collection_year": "10-Apr-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I23",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 923
        },
        {
          "accession": "OR231782.1",
          "cohort_code": "L5",
          "collection_year": "25-Jan-2021",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I24",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 928
        },
        {
          "accession": "OR231781.1",
          "cohort_code": "L5",
          "collection_year": "15-Nov-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I25",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 928
        },
        {
          "accession": "OR231780.1",
          "cohort_code": "L5",
          "collection_year": "14-Dec-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I26",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 928
        },
        {
          "accession": "OR231779.1",
          "cohort_code": "L5",
          "collection_year": "14-Nov-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I27",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 928
        },
        {
          "accession": "OR231778.1",
          "cohort_code": "L5",
          "collection_year": "14-Nov-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I28",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 928
        },
        {
          "accession": "OR231777.1",
          "cohort_code": "L5",
          "collection_year": "29-Nov-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I29",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 928
        },
        {
          "accession": "OR231776.1",
          "cohort_code": "L5",
          "collection_year": "21-Sep-2020",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I30",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 928
        },
        {
          "accession": "OR231775.1",
          "cohort_code": "L5",
          "collection_year": "16-Dec-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I31",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 928
        },
        {
          "accession": "OR231774.1",
          "cohort_code": "L5",
          "collection_year": "16-Dec-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I32",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 928
        },
        {
          "accession": "OR231773.1",
          "cohort_code": "L5",
          "collection_year": "02-Dec-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I33",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 928
        },
        {
          "accession": "OR231772.1",
          "cohort_code": "L5",
          "collection_year": "16-Dec-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I34",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 693
        },
        {
          "accession": "OR231771.1",
          "cohort_code": "L5",
          "collection_year": "02-Dec-2019",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I35",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 928
        },
        {
          "accession": "OR231770.1",
          "cohort_code": "L5",
          "collection_year": "12-Jul-2000",
          "host_associate": "Field foliage collection",
          "isolate_id": "L5_I36",
          "locality": "USA",
          "marker_locus": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
          "organism": "Reticulitermes sp.",
          "raw_length_bp": 923
        }
      ],
      "locus_name": "Ribosomal 16S/28S/ITS rDNA (4Ne)",
      "msa_cpu_ms": 11632,
      "nucleotide_diversity_pi": 0.009,
      "num_isolates": 36,
      "parsimony_informative_ry3": 15,
      "ploidy_scalar": 4.0,
      "raw0_ln_l": -1889.6842,
      "raw_bp": 33075,
      "rcfv_codon12": 0.0039,
      "rcfv_raw0": 0.0252,
      "rcfv_ry3": 0.0019,
      "rcfv_unrecoded": 0.0088,
      "region_label": "Holarctic Temperate Subterranean Forest Deme (Ribosomal 16S/28S/ITS Spacer 4Ne)",
      "rhat": 1.0063,
      "runie_ry3_marginal_ln_l": -1275.0842,
      "runie_ry3_post_mean_ln_l": -1273.3342,
      "species": "Reticulitermes spp.",
      "tajima_d": 1.9752,
      "total_cpu_ms": 11666,
      "tree_mcmc_cpu_ms": 34,
      "unrec4_ln_l": -1451.8842,
      "watterson_theta": 0.0057
    },
    {
      "aligned_cols_bp": 3161,
      "axis_group": "Same-Region Multi-Locus (Fig 4B: Paleotropical & Holarctic)",
      "clade_lineage": "Reticulitermes / Rhinotermitidae (Caste/Cellulase Sweep)",
      "codon12_ln_l": -31262.6728,
      "cohort_code": "L6",
      "cohort_source_id": "NCBI Entrez PX683729.1..KC740821.1 (N=36)",
      "distinct_patterns_ry3": 2037,
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        {
          "active_lineages": 14,
          "biogeographic_driver": "Warm interglacial forest and savanna gallery connectivity across Paleotropical, Neotropical, and Holarctic basins",
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          "accession": "PX683729.1",
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        {
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        {
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        {
          "accession": "PX138766.1",
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          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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        {
          "accession": "PX138765.1",
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          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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        {
          "accession": "PX138764.1",
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          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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        {
          "accession": "PX138763.1",
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          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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        },
        {
          "accession": "PX138761.1",
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          "collection_year": "30-Mar-2023",
          "host_associate": "Field foliage collection",
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          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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          "raw_length_bp": 1299
        },
        {
          "accession": "MN944397.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I10",
          "locality": "China",
          "marker_locus": "Nuclear Endoglucanase / Hexamerin / Caste Locus",
          "organism": "Reticulitermes perilucifugus",
          "raw_length_bp": 1347
        },
        {
          "accession": "MN944394.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I11",
          "locality": "China",
          "marker_locus": "Nuclear Endoglucanase / Hexamerin / Caste Locus",
          "organism": "Reticulitermes perilucifugus",
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        },
        {
          "accession": "MN944393.1",
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          "locality": "China",
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        {
          "accession": "CB518311.1",
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          "host_associate": "Field foliage collection",
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          "locality": "Vector: Uni-ZAP XR",
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        {
          "accession": "CB518298.1",
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          "locality": "Vector: Uni-ZAP XR",
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        },
        {
          "accession": "CB518297.1",
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          "host_associate": "Field foliage collection",
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          "locality": "Vector: Uni-ZAP XR",
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        {
          "accession": "CB518296.1",
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          "locality": "Vector: Uni-ZAP XR",
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        {
          "accession": "CB518295.1",
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          "locality": "Vector: Uni-ZAP XR",
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        {
          "accession": "BQ788187.1",
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          "host_associate": "Field foliage collection",
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          "locality": "Vector: Uni-ZAP XR",
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        },
        {
          "accession": "BQ788173.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I19",
          "locality": "Vector: Uni-ZAP XR",
          "marker_locus": "Nuclear Endoglucanase / Hexamerin / Caste Locus",
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          "raw_length_bp": 487
        },
        {
          "accession": "BQ788169.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I20",
          "locality": "Vector: Uni-ZAP XR",
          "marker_locus": "Nuclear Endoglucanase / Hexamerin / Caste Locus",
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        },
        {
          "accession": "BQ788167.1",
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          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I21",
          "locality": "Vector: Uni-ZAP XR",
          "marker_locus": "Nuclear Endoglucanase / Hexamerin / Caste Locus",
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          "raw_length_bp": 613
        },
        {
          "accession": "FX985457.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
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          "locality": "contig: comp810803_c12_seq1",
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        },
        {
          "accession": "FX985455.1",
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          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I23",
          "locality": "contig: comp803710_c5_seq2",
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          "raw_length_bp": 2616
        },
        {
          "accession": "KC751536.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I24",
          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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          "raw_length_bp": 1482
        },
        {
          "accession": "KC751535.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I25",
          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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          "raw_length_bp": 1471
        },
        {
          "accession": "KC751534.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I26",
          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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          "raw_length_bp": 1088
        },
        {
          "accession": "KX386002.1",
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          "isolate_id": "L6_I27",
          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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          "raw_length_bp": 2004
        },
        {
          "accession": "AF067634.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I28",
          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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        },
        {
          "accession": "AF046011.1",
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          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I29",
          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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        },
        {
          "accession": "AF046009.1",
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          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I30",
          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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        },
        {
          "accession": "AF046008.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I31",
          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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        },
        {
          "accession": "KF206431.1",
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          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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          "raw_length_bp": 1910
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        {
          "accession": "KC740824.1",
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          "collection_year": "CFSNI2324",
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          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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        {
          "accession": "KC740823.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I34",
          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
          "marker_locus": "Nuclear Endoglucanase / Hexamerin / Caste Locus",
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          "raw_length_bp": 720
        },
        {
          "accession": "KC740822.1",
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          "collection_year": "2021-2025",
          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I35",
          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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          "organism": "Coptotermes formosanus",
          "raw_length_bp": 911
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        {
          "accession": "KC740821.1",
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          "collection_year": "CFSNI2234",
          "host_associate": "Field foliage collection",
          "isolate_id": "L6_I36",
          "locality": "Holarctic Temperate Subterranean Forest Deme (Caste Hexamerin / Cellulase Selective Sweep Locus)",
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          "organism": "Coptotermes formosanus",
          "raw_length_bp": 848
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      ],
      "locus_name": "Nuclear Endoglucanase / Hexamerin / Caste Locus",
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      "rhat": 4.2444,
      "runie_ry3_marginal_ln_l": -31226.2728,
      "runie_ry3_post_mean_ln_l": -31060.027,
      "species": "Reticulitermes / Rhinotermitidae",
      "tajima_d": 8.7703,
      "total_cpu_ms": 10981,
      "tree_mcmc_cpu_ms": 269,
      "unrec4_ln_l": -31403.0728,
      "watterson_theta": 0.1872
    }
  ],
  "primary_tool_chain": "bio-suite-supervisor -> super-blast-adaptive (Dual-Pass SHA-256 Audit + Autonomous Loop-Back Replacement) -> gotoh-msa (COX1-Phased Mitogenome + Nuclear CDS) + mafft-native (Katoh E-INS-i ITS1-5.8S) -> popgen-blind-dualpass (RY3 + Paralog Filter) -> felsenstein-modeltest (GTR+F+R4) -> bionj-nni-ml (B=1,000 UFBoot) -> runie-quartet-coalescent (18 loci, 11,436,768 quartets) -> TimeTreeLSD2 -> runie-mcmc-skyline (25,000 gen, 20% burn-in) -> goldman-yang-dnds (61-state + 4D BEB)",
  "quarantined_ncbi_anomalies": [
    {
      "accession": "PZ764336.1",
      "anomaly_code": "NCBI_UNVERIFIED_ANNOTATION_QUARANTINE",
      "autonomous_resolution": "Quarantined PZ764336.1 to 0-Beaker control dump and autonomously substituted verified termite mitogenome NC_056118.1 (Cryptotermes havilandi (Tropical Drywood Termite RefSeq)) in Iteration 2.",
      "declared_locus": "Complete Mitochondrial Genome",
      "declared_organism": "Cryptocercus zagunaoensis voucher GHBG_1_1 (UNVERIFIED GenBank)",
      "replacement_accession": "NC_056118.1",
      "reportable_in_manuscript": true,
      "severity": "CRITICAL_QUARANTINED",
      "super_blast_evidence": "GenBank header flagged UNVERIFIED ('PZ764336.1 UNVERIFIED: Cryptocercus zagunaoensis voucher GHBG_1_1 mi'); Super-BLAST identity 76.0% vs. NC_015800.1."
    },
    {
      "accession": "PV077931.1",
      "anomaly_code": "NCBI_UNVERIFIED_ANNOTATION_QUARANTINE",
      "autonomous_resolution": "Quarantined PV077931.1 to 0-Beaker control dump and autonomously substituted verified termite mitogenome NC_015800.1 (Coptotermes formosanus (Formosan Subterranean Termite RefSeq)) in Iteration 2.",
      "declared_locus": "Complete Mitochondrial Genome",
      "declared_organism": "Coptotermes testaceus isolate 1580 (UNVERIFIED GenBank)",
      "replacement_accession": "NC_015800.1",
      "reportable_in_manuscript": true,
      "severity": "CRITICAL_QUARANTINED",
      "super_blast_evidence": "GenBank header flagged UNVERIFIED ('PV077931.1 UNVERIFIED: Coptotermes testaceus isolate 1580 mitochondr'); Super-BLAST identity 90.3% vs. NC_015800.1."
    },
    {
      "accession": "PV077934.1",
      "anomaly_code": "NCBI_UNVERIFIED_ANNOTATION_QUARANTINE",
      "autonomous_resolution": "Quarantined PV077934.1 to 0-Beaker control dump and autonomously substituted verified termite mitogenome NC_025522.1 (Macrotermes natalensis (African Mound-Building Fungus Termite)) in Iteration 2.",
      "declared_locus": "Complete Mitochondrial Genome",
      "declared_organism": "Heterotermes longiceps isolate 158 (UNVERIFIED GenBank)",
      "replacement_accession": "NC_025522.1",
      "reportable_in_manuscript": true,
      "severity": "CRITICAL_QUARANTINED",
      "super_blast_evidence": "GenBank header flagged UNVERIFIED ('PV077934.1 UNVERIFIED: Heterotermes longiceps isolate 158 mitochondr'); Super-BLAST identity 88.5% vs. NC_015800.1."
    },
    {
      "accession": "PV077928.1",
      "anomaly_code": "NCBI_UNVERIFIED_ANNOTATION_QUARANTINE",
      "autonomous_resolution": "Quarantined PV077928.1 to 0-Beaker control dump and autonomously substituted verified termite mitogenome NC_039398.1 (Pericapritermes nitobei (Asymmetric-Snapping Mandible Termite)) in Iteration 2.",
      "declared_locus": "Complete Mitochondrial Genome",
      "declared_organism": "Anoplotermes nr. distans isolate 1574 (UNVERIFIED GenBank)",
      "replacement_accession": "NC_039398.1",
      "reportable_in_manuscript": true,
      "severity": "CRITICAL_QUARANTINED",
      "super_blast_evidence": "GenBank header flagged UNVERIFIED ('PV077928.1 UNVERIFIED: Anoplotermes nr. distans isolate 1574 mitocho'); Super-BLAST identity 81.6% vs. NC_015800.1."
    },
    {
      "accession": "PV077920.1",
      "anomaly_code": "NCBI_UNVERIFIED_ANNOTATION_QUARANTINE",
      "autonomous_resolution": "Quarantined PV077920.1 to 0-Beaker control dump and autonomously substituted verified termite mitogenome NC_034124.1 (Amitermes obeuntis (Magnetic/Meridional Mound Lineage)) in Iteration 2.",
      "declared_locus": "Complete Mitochondrial Genome",
      "declared_organism": "Neocapritermes talpoides isolate 154 (UNVERIFIED GenBank)",
      "replacement_accession": "NC_034124.1",
      "reportable_in_manuscript": true,
      "severity": "CRITICAL_QUARANTINED",
      "super_blast_evidence": "GenBank header flagged UNVERIFIED ('PV077920.1 UNVERIFIED: Neocapritermes talpoides isolate 154 mitochon'); Super-BLAST identity 83.7% vs. NC_015800.1."
    },
    {
      "accession": "PV077933.1",
      "anomaly_code": "NCBI_UNVERIFIED_ANNOTATION_QUARANTINE",
      "autonomous_resolution": "Quarantined PV077933.1 to 0-Beaker control dump and autonomously substituted verified termite mitogenome NC_026115.1 (Nasutitermes corniger (Neotropical Arboreal Polygynous Nasute)) in Iteration 2.",
      "declared_locus": "Complete Mitochondrial Genome",
      "declared_organism": "Nasutitermes surinamensis isolate 1585 (UNVERIFIED GenBank)",
      "replacement_accession": "NC_026115.1",
      "reportable_in_manuscript": true,
      "severity": "CRITICAL_QUARANTINED",
      "super_blast_evidence": "GenBank header flagged UNVERIFIED ('PV077933.1 UNVERIFIED: Nasutitermes surinamensis isolate 1585 mitoch'); Super-BLAST identity 82.7% vs. NC_015800.1."
    }
  ],
  "quarantined_ncbi_anomalies_count": 6,
  "rcfv_regime1_ry3": 0.0062,
  "rcfv_regime2_codon12": 0.0223,
  "rcfv_regime3_unrec4": 0.0411,
  "rcfv_regime4_raw0star": 0.0411,
  "regime1_ry3_marginal_ln_l": -450214.7895,
  "regime1_ry3_posterior_mean_ln_l": -450211.5895,
  "regime2_codon12_marginal_ln_l": -543533.4962,
  "regime3_unrec4_marginal_ln_l": -550693.8629,
  "regime4_raw0star_marginal_ln_l": -556064.6896,
  "solved_newick_topology": "((F_T049:0.03730,((((G_T060:0.03448,G_T061:0.03662)100:0.00736,(G_T062:0.03972,(G_T063:0.03665,G_T064:0.03020)98:0.00323)100:0.00574)100:0.14277,((G_T056:0.02900,(G_T059:0.02674,(G_T058:0.01607,(G_T055:0.01355,G_T057:0.00976)100:0.00740)100:0.00471)95:0.00693)100:0.12603,(((F_T043:0.04709,(E_T041:0.03320,(E_T042:0.03032,(E_T039:0.01703,E_T040:0.01676)100:0.02824)100:0.00613)100:0.01323)100:0.09456,((((D_T025:0.01535,(D_T023:0.02407,D_T024:0.02466)100:0.00156)100:0.01412,((D_T026:0.02067,D_T027:0.02176)100:0.03740,((D_T032:0.09949,(D_T030:0.02034,D_T031:0.02594)100:0.00844)100:0.01119,(D_T028:0.02930,D_T029:0.02063)100:0.01847)100:0.03118)100:0.01487)100:0.10393,((((A_T003:0.03011,A_T004:0.03657)100:0.03151,(A_T001:0.05183,A_T002:0.11439)100:0.03370)100:0.01355,(B_T005:0.09061,B_T006:0.08107)100:0.01864)100:0.28814,((((((C_T013:0.05316,(C_T012:0.04852,C_T014:0.04567)100:0.01918)100:0.00405,(C_T015:0.07025,C_T016:0.05327)100:0.00765)100:0.04283,(C_T011:0.09157,((B_T008:0.04190,B_T009:0.04082)100:0.03724,(B_T007:0.08113,B_T010:0.07534)100:0.00891)100:0.00887)100:0.10620)95:0.07527,(C_T018:0.08191,C_T017:0.05735)100:0.00505)100:0.02257,(C_T019:0.06903,C_T020:0.07720)100:0.00668)100:0.06595,(D_T021:0.02469,D_T022:0.01769)100:0.00747)100:0.11528)100:0.02027)100:0.09441,((E_T038:0.00823,(E_T033:0.01161,(E_T034:0.00930,E_T036:0.00762)100:0.00362)100:0.00219)100:0.01446,(E_T035:0.01885,E_T037:0.02031)100:0.01139)100:0.09529)100:0.04302)100:0.03502,((F_T048:0.03263,(F_T047:0.03650,F_T046:0.03376)95:0.00180)100:0.00093,(F_T045:0.03903,F_T044:0.03517)100:0.00146)100:0.03691)100:0.08744)100:0.01625)100:0.06344,(G_T054:0.03245,F_T050:0.04416)100:0.01282)94:0.00020)99:0.00020,(F_T051:0.05421,(F_T052:0.04414,F_T053:0.04405)100:0.00160)100:0.00094);",
  "solved_ry3_ml_newick": "((F_T049:0.03730,((((G_T060:0.03448,G_T061:0.03662)100:0.00736,(G_T062:0.03972,(G_T063:0.03665,G_T064:0.03020)98:0.00323)100:0.00574)100:0.14277,((G_T056:0.02900,(G_T059:0.02674,(G_T058:0.01607,(G_T055:0.01355,G_T057:0.00976)100:0.00740)100:0.00471)95:0.00693)100:0.12603,(((F_T043:0.04709,(E_T041:0.03320,(E_T042:0.03032,(E_T039:0.01703,E_T040:0.01676)100:0.02824)100:0.00613)100:0.01323)100:0.09456,((((D_T025:0.01535,(D_T023:0.02407,D_T024:0.02466)100:0.00156)100:0.01412,((D_T026:0.02067,D_T027:0.02176)100:0.03740,((D_T032:0.09949,(D_T030:0.02034,D_T031:0.02594)100:0.00844)100:0.01119,(D_T028:0.02930,D_T029:0.02063)100:0.01847)100:0.03118)100:0.01487)100:0.10393,((((A_T003:0.03011,A_T004:0.03657)100:0.03151,(A_T001:0.05183,A_T002:0.11439)100:0.03370)100:0.01355,(B_T005:0.09061,B_T006:0.08107)100:0.01864)100:0.28814,((((((C_T013:0.05316,(C_T012:0.04852,C_T014:0.04567)100:0.01918)100:0.00405,(C_T015:0.07025,C_T016:0.05327)100:0.00765)100:0.04283,(C_T011:0.09157,((B_T008:0.04190,B_T009:0.04082)100:0.03724,(B_T007:0.08113,B_T010:0.07534)100:0.00891)100:0.00887)100:0.10620)95:0.07527,(C_T018:0.08191,C_T017:0.05735)100:0.00505)100:0.02257,(C_T019:0.06903,C_T020:0.07720)100:0.00668)100:0.06595,(D_T021:0.02469,D_T022:0.01769)100:0.00747)100:0.11528)100:0.02027)100:0.09441,((E_T038:0.00823,(E_T033:0.01161,(E_T034:0.00930,E_T036:0.00762)100:0.00362)100:0.00219)100:0.01446,(E_T035:0.01885,E_T037:0.02031)100:0.01139)100:0.09529)100:0.04302)100:0.03502,((F_T048:0.03263,(F_T047:0.03650,F_T046:0.03376)95:0.00180)100:0.00093,(F_T045:0.03903,F_T044:0.03517)100:0.00146)100:0.03691)100:0.08744)100:0.01625)100:0.06344,(G_T054:0.03245,F_T050:0.04416)100:0.01282)94:0.00020)99:0.00020,(F_T051:0.05421,(F_T052:0.04414,F_T053:0.04405)100:0.00160)100:0.00094);",
  "solved_timetree_newick": "((F_T049:0.03730,((((G_T060:0.03448,G_T061:0.03662)100:0.00736,(G_T062:0.03972,(G_T063:0.03665,G_T064:0.03020)98:0.00323)100:0.00574)100:0.14277,((G_T056:0.02900,(G_T059:0.02674,(G_T058:0.01607,(G_T055:0.01355,G_T057:0.00976)100:0.00740)100:0.00471)95:0.00693)100:0.12603,(((F_T043:0.04709,(E_T041:0.03320,(E_T042:0.03032,(E_T039:0.01703,E_T040:0.01676)100:0.02824)100:0.00613)100:0.01323)100:0.09456,((((D_T025:0.01535,(D_T023:0.02407,D_T024:0.02466)100:0.00156)100:0.01412,((D_T026:0.02067,D_T027:0.02176)100:0.03740,((D_T032:0.09949,(D_T030:0.02034,D_T031:0.02594)100:0.00844)100:0.01119,(D_T028:0.02930,D_T029:0.02063)100:0.01847)100:0.03118)100:0.01487)100:0.10393,((((A_T003:0.03011,A_T004:0.03657)100:0.03151,(A_T001:0.05183,A_T002:0.11439)100:0.03370)100:0.01355,(B_T005:0.09061,B_T006:0.08107)100:0.01864)100:0.28814,((((((C_T013:0.05316,(C_T012:0.04852,C_T014:0.04567)100:0.01918)100:0.00405,(C_T015:0.07025,C_T016:0.05327)100:0.00765)100:0.04283,(C_T011:0.09157,((B_T008:0.04190,B_T009:0.04082)100:0.03724,(B_T007:0.08113,B_T010:0.07534)100:0.00891)100:0.00887)100:0.10620)95:0.07527,(C_T018:0.08191,C_T017:0.05735)100:0.00505)100:0.02257,(C_T019:0.06903,C_T020:0.07720)100:0.00668)100:0.06595,(D_T021:0.02469,D_T022:0.01769)100:0.00747)100:0.11528)100:0.02027)100:0.09441,((E_T038:0.00823,(E_T033:0.01161,(E_T034:0.00930,E_T036:0.00762)100:0.00362)100:0.00219)100:0.01446,(E_T035:0.01885,E_T037:0.02031)100:0.01139)100:0.09529)100:0.04302)100:0.03502,((F_T048:0.03263,(F_T047:0.03650,F_T046:0.03376)95:0.00180)100:0.00093,(F_T045:0.03903,F_T044:0.03517)100:0.00146)100:0.03691)100:0.08744)100:0.01625)100:0.06344,(G_T054:0.03245,F_T050:0.04416)100:0.01282)94:0.00020)99:0.00020,(F_T051:0.05421,(F_T052:0.04414,F_T053:0.04405)100:0.00160)100:0.00094);",
  "stage_fetch_audit_ms": 66758,
  "study_id": "STUDY-ISOPTERA-GLOBAL-RADIATION-NATIVE-BIOSUITE-2026",
  "supermatrix_aligned_cols": 44075,
  "supermatrix_distinct_patterns_ry3": 16527,
  "supermatrix_ess": 129.4297,
  "supermatrix_parsimony_informative_ry3": 13546,
  "supermatrix_rhat": 1.0165,
  "supervisor_run_id": "runie-native-isoptera-global-26",
  "total_raw_bp_on_disk": 1555990,
  "total_records_on_disk": 544,
  "validation_set_id": "VAL-SET-065-ISOPTERA-GLOBAL-RADIATION-544RECS"
}